RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 IDEP14735 1019 aa14.04□□□□□ -0.16
SRGAP3-202ENST00000383836 TMEM67Q5HYA8 995 aa14.04□□□□□ -0.16
SRGAP3-202ENST00000383836 RABGAP1Q9Y3P9 1069 aa14.04□□□□□ -0.16
SRGAP3-202ENST00000383836 METTL24Q5JXM2 366 aa14.04□□□□□ -0.16
SRGAP3-202ENST00000383836 AKR1B15C9JRZ8 316 aaPredicted RBP14.04□□□□□ -0.16
SRGAP3-202ENST00000383836 FYB2Q5VWT5 728 aa14.04□□□□□ -0.16
SRGAP3-202ENST00000383836 ECHDC1Q9NTX5 307 aa14.04□□□□□ -0.16
SRGAP3-202ENST00000383836 LRRC45Q96CN5 670 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 WDHD1O75717 1129 aaPredicted RBP14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 TATP17735 454 aaPredicted RBP14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 PPFIA1Q13136 1202 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 MKNK2Q9HBH9 465 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 MRVI1Q9Y6F6 885 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 ZNF445P59923 1031 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 SEPT14Q6ZU15 432 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 CCDC144CPQ8IYA2 1237 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 NECAB1Q8N987 351 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 CCDC26Q8TAB7 109 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 DNMBPQ6XZF7 1577 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 MICU3Q86XE3 530 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 IMPACTQ9P2X3 320 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 MAP3K12Q12852 859 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 BCL2L12Q9HB09 334 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 RBBP5Q15291 538 aaKnown RBP14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 CCDC174Q6PII3 467 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 NCOA7Q8NI08 942 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 ATP2A2P16615 1042 aaKnown RBP14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 SLC26A6Q9BXS9 759 aa14.03□□□□□ -0.16
SRGAP3-202ENST00000383836 RANBP6O60518 1105 aaKnown RBP14.02□□□□□ -0.16
SRGAP3-202ENST00000383836 SPATS2Q86XZ4 545 aaKnown RBP14.02□□□□□ -0.16
SRGAP3-202ENST00000383836 IFT20Q8IY31 132 aa14.02□□□□□ -0.16
SRGAP3-202ENST00000383836 SYCP3Q8IZU3 236 aa14.02□□□□□ -0.16
SRGAP3-202ENST00000383836 TLDC2A0PJX2 215 aa14.02□□□□□ -0.16
SRGAP3-202ENST00000383836 CCDC122Q5T0U0 273 aa14.02□□□□□ -0.16
SRGAP3-202ENST00000383836 MICAL1Q8TDZ2 1067 aa14.02□□□□□ -0.16
SRGAP3-202ENST00000383836 CABP1Q9NZU7 370 aa14.02□□□□□ -0.16
SRGAP3-202ENST00000383836 UTP14CQ5TAP6 766 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-202ENST00000383836 ABCF2Q9UG63 623 aa14.02□□□□□ -0.17
SRGAP3-202ENST00000383836 RBM42Q9BTD8 480 aaKnown RBP14.02□□□□□ -0.17
SRGAP3-202ENST00000383836 GBP5Q96PP8 586 aa14.02□□□□□ -0.17
SRGAP3-202ENST00000383836 ESYT1Q9BSJ8 1104 aa14.02□□□□□ -0.17
SRGAP3-202ENST00000383836 USH1CQ9Y6N9 552 aa14.02□□□□□ -0.17
SRGAP3-202ENST00000383836 SLC8A1P32418 973 aa14.02□□□□□ -0.17
SRGAP3-202ENST00000383836 RFC1P35251 1148 aaPredicted RBP14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 IGHMBP2P38935 993 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 CCDC25Q86WR0 208 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 CCDC8Q9H0W5 538 aaPredicted RBP14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 BICDL2A1A5D9 508 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 MAP7Q14244 749 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 LUC7L3O95232 432 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 ARHGAP24Q8N264 748 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 GOLGA5Q8TBA6 731 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 CABS1Q96KC9 395 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 SPTLC2O15270 562 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 PPP1R7Q15435 360 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 TAOK1Q7L7X3 1001 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 CAMSAP2Q08AD1 1489 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 CFAP157Q5JU67 520 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 PNMA8AQ86V59 439 aaPredicted RBP14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 ARHGEF2Q92974 986 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 MCUR1Q96AQ8 359 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 C8orf74Q6P047 294 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 UTP11Q9Y3A2 253 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 RUFY4Q6ZNE9 571 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 TTF2Q9UNY4 1162 aaKnown RBP14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 PEG3Q9GZU2 1588 aa14.01□□□□□ -0.17
SRGAP3-202ENST00000383836 GKAP1Q5VSY0 366 aaPredicted RBP14□□□□□ -0.17
SRGAP3-202ENST00000383836 PPP1R9BQ96SB3 815 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 SPATS2LQ9NUQ6 558 aaKnown RBP14□□□□□ -0.17
SRGAP3-202ENST00000383836 IQGAP2Q13576 1575 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 PDE1CQ14123 709 aaPredicted RBP14□□□□□ -0.17
SRGAP3-202ENST00000383836 DZIP1Q86YF9 867 aaKnown RBP14□□□□□ -0.17
SRGAP3-202ENST00000383836 RLBP1P12271 317 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 ANKRD24Q8TF21 1146 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 FANCD2Q9BXW9 1451 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 MARCKSP29966 332 aaPredicted RBP14□□□□□ -0.17
SRGAP3-202ENST00000383836 CCDC62Q6P9F0 684 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 NEK11Q8NG66 645 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 CAPN7Q9Y6W3 813 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 CUL5Q93034 780 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 RAB3IPQ96QF0 476 aaPredicted RBP14□□□□□ -0.17
SRGAP3-202ENST00000383836 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
SRGAP3-202ENST00000383836 GPR161Q8N6U8 529 aaKnown RBP14□□□□□ -0.17
SRGAP3-202ENST00000383836 KIAA1524Q8TCG1 905 aa14□□□□□ -0.17
SRGAP3-202ENST00000383836 CALCOCO2Q13137 446 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 RRS1Q15050 365 aaKnown RBP13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 MIS18AQ9NYP9 233 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 FAM135AQ9P2D6 1515 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 TSHZ3Q63HK5 1081 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 CARD6Q9BX69 1037 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 TRIM14Q14142 442 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 ATL3Q6DD88 541 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 ALG1Q9BT22 464 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 E7EVH7 732 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 ZNF500O60304 480 aaPredicted RBP13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 TTF1Q15361 905 aaPredicted RBP13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 MCM10Q7L590 875 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 MMRN2Q9H8L6 949 aa13.99□□□□□ -0.17
SRGAP3-202ENST00000383836 RASSF2P50749 326 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms