RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 PSMD14O00487 310 aa24.08■■□□□ 1.45
GTF3A-201ENST00000381140 CIAO1O76071 339 aa24.08■■□□□ 1.45
GTF3A-201ENST00000381140 UBE4AQ14139 1066 aa24.08■■□□□ 1.45
GTF3A-201ENST00000381140 POTECB2RU33 542 aa24.07■■□□□ 1.44
GTF3A-201ENST00000381140 PDE8BO95263 885 aa24.07■■□□□ 1.44
GTF3A-201ENST00000381140 VGLL2Q8N8G2 317 aa24.07■■□□□ 1.44
GTF3A-201ENST00000381140 L3MBTL3Q96JM7 780 aaPredicted RBP24.07■■□□□ 1.44
GTF3A-201ENST00000381140 COA1Q9GZY4 146 aa24.07■■□□□ 1.44
GTF3A-201ENST00000381140 CHMP4BQ9H444 224 aaKnown RBP24.07■■□□□ 1.44
GTF3A-201ENST00000381140 SUPT16HQ9Y5B9 1047 aaKnown RBP24.07■■□□□ 1.44
GTF3A-201ENST00000381140 LMOD1P29536 600 aaPredicted RBP24.06■■□□□ 1.44
GTF3A-201ENST00000381140 IL15P40933 162 aaPredicted RBP24.06■■□□□ 1.44
GTF3A-201ENST00000381140 GMPSP49915 693 aaPredicted RBP24.06■■□□□ 1.44
GTF3A-201ENST00000381140 CEP85Q6P2H3 762 aa24.06■■□□□ 1.44
GTF3A-201ENST00000381140 ZNF804AQ7Z570 1209 aa24.06■■□□□ 1.44
GTF3A-201ENST00000381140 ZBTB40Q9NUA8 1239 aa24.06■■□□□ 1.44
GTF3A-201ENST00000381140 CEP126Q9P2H0 1117 aa24.06■■□□□ 1.44
GTF3A-201ENST00000381140 FBXO3Q9UK99 471 aa24.06■■□□□ 1.44
GTF3A-201ENST00000381140 IRS2Q9Y4H2 1338 aa24.06■■□□□ 1.44
GTF3A-201ENST00000381140 IQCA1LA6NCM1 817 aa24.05■■□□□ 1.44
GTF3A-201ENST00000381140 GYG1P46976 350 aa24.05■■□□□ 1.44
GTF3A-201ENST00000381140 PODNQ7Z5L7 613 aa24.05■■□□□ 1.44
GTF3A-201ENST00000381140 HACL1Q9UJ83 578 aa24.05■■□□□ 1.44
GTF3A-201ENST00000381140 ZBTB12Q9Y330 459 aaPredicted RBP24.05■■□□□ 1.44
GTF3A-201ENST00000381140 MYH13Q9UKX3 1938 aa24.05■■□□□ 1.44
GTF3A-201ENST00000381140 G3BP1Q13283 466 aaKnown RBP eCLIP24.04■■□□□ 1.44
GTF3A-201ENST00000381140 OS9Q13438 667 aaPredicted RBP24.04■■□□□ 1.44
GTF3A-201ENST00000381140 POLA2Q14181 598 aa24.04■■□□□ 1.44
GTF3A-201ENST00000381140 PUM3Q15397 648 aaKnown RBP24.04■■□□□ 1.44
GTF3A-201ENST00000381140 C15orf52Q6ZUT6 534 aaKnown RBP24.04■■□□□ 1.44
GTF3A-201ENST00000381140 SSH3Q8TE77 659 aa24.04■■□□□ 1.44
GTF3A-201ENST00000381140 ZNF646O15015 1829 aaPredicted RBP24.04■■□□□ 1.44
GTF3A-201ENST00000381140 SCNN1DP51172 638 aa24.03■■□□□ 1.44
GTF3A-201ENST00000381140 CD209Q9NNX6 404 aa24.03■■□□□ 1.44
GTF3A-201ENST00000381140 USP17L3A6NCW0 530 aa24.03■■□□□ 1.44
GTF3A-201ENST00000381140 USP17L4A6NCW7 530 aa24.03■■□□□ 1.44
GTF3A-201ENST00000381140 EPS15P42566 896 aa24.03■■□□□ 1.44
GTF3A-201ENST00000381140 USP17L1Q7RTZ2 530 aa24.03■■□□□ 1.44
GTF3A-201ENST00000381140 SURF6O75683 361 aaKnown RBP24.02■■□□□ 1.44
GTF3A-201ENST00000381140 IFIT1P09914 478 aaKnown RBP24.02■■□□□ 1.44
GTF3A-201ENST00000381140 SLC5A1P13866 664 aa24.02■■□□□ 1.44
GTF3A-201ENST00000381140 EPHX2P34913 555 aa24.02■■□□□ 1.44
GTF3A-201ENST00000381140 TFCP2Q12800 502 aa24.02■■□□□ 1.44
GTF3A-201ENST00000381140 ATP2B3Q16720 1220 aa24.02■■□□□ 1.44
GTF3A-201ENST00000381140 EAPPQ56P03 285 aaPredicted RBP24.02■■□□□ 1.44
GTF3A-201ENST00000381140 VPS37DQ86XT2 251 aa24.02■■□□□ 1.44
GTF3A-201ENST00000381140 TAF1DQ9H5J8 278 aaPredicted RBP24.02■■□□□ 1.44
GTF3A-201ENST00000381140 HIBADHP31937 336 aaKnown RBP24.01■■□□□ 1.43
GTF3A-201ENST00000381140 GTF2IP78347 998 aa24.01■■□□□ 1.43
GTF3A-201ENST00000381140 GPRC5DQ9NZD1 345 aa24.01■■□□□ 1.43
GTF3A-201ENST00000381140 ARAP2Q8WZ64 1704 aa24■■□□□ 1.43
GTF3A-201ENST00000381140 VIL1P09327 827 aaKnown RBP24■■□□□ 1.43
GTF3A-201ENST00000381140 FGFR2P21802 821 aa24■■□□□ 1.43
GTF3A-201ENST00000381140 CAVIN4Q5BKX8 364 aa24■■□□□ 1.43
GTF3A-201ENST00000381140 LPIN2Q92539 896 aa24■■□□□ 1.43
GTF3A-201ENST00000381140 FAM84BQ96KN1 310 aaPredicted RBP24■■□□□ 1.43
GTF3A-201ENST00000381140 CRBNQ96SW2 442 aa24■■□□□ 1.43
GTF3A-201ENST00000381140 MXD3Q9BW11 206 aa24■■□□□ 1.43
GTF3A-201ENST00000381140 IQSEC3Q9UPP2 1182 aaPredicted RBP24■■□□□ 1.43
GTF3A-201ENST00000381140 JAG2Q9Y219 1238 aa24■■□□□ 1.43
GTF3A-201ENST00000381140 SHTN1A0MZ66 631 aa23.99■■□□□ 1.43
GTF3A-201ENST00000381140 TOMM70O94826 608 aa23.99■■□□□ 1.43
GTF3A-201ENST00000381140 TTLL5Q6EMB2 1281 aa23.99■■□□□ 1.43
GTF3A-201ENST00000381140 RSBN1LQ6PCB5 846 aaPredicted RBP23.99■■□□□ 1.43
GTF3A-201ENST00000381140 BCAMP50895 628 aa23.98■■□□□ 1.43
GTF3A-201ENST00000381140 RPAP2Q8IXW5 612 aaPredicted RBP23.98■■□□□ 1.43
GTF3A-201ENST00000381140 MICALL2Q8IY33 904 aa23.98■■□□□ 1.43
GTF3A-201ENST00000381140 CNOT7Q9UIV1 285 aaKnown RBP23.98■■□□□ 1.43
GTF3A-201ENST00000381140 HMMRO75330 724 aa23.97■■□□□ 1.43
GTF3A-201ENST00000381140 FRAT2O75474 233 aaPredicted RBP23.97■■□□□ 1.43
GTF3A-201ENST00000381140 NEFLP07196 543 aa23.97■■□□□ 1.43
GTF3A-201ENST00000381140 POTEIP0CG38 1075 aa23.97■■□□□ 1.43
GTF3A-201ENST00000381140 POTEJP0CG39 1038 aa23.97■■□□□ 1.43
GTF3A-201ENST00000381140 IL1R1P14778 569 aa23.97■■□□□ 1.43
GTF3A-201ENST00000381140 RPS12P25398 132 aaKnown RBP23.97■■□□□ 1.43
GTF3A-201ENST00000381140 STRIP1Q5VSL9 837 aa23.97■■□□□ 1.43
GTF3A-201ENST00000381140 CLEC11AQ9Y240 323 aa23.97■■□□□ 1.43
GTF3A-201ENST00000381140 GTF3C3Q9Y5Q9 886 aa23.97■■□□□ 1.43
GTF3A-201ENST00000381140 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.97■■□□□ 1.43
GTF3A-201ENST00000381140 H7C1D1 291 aa23.96■■□□□ 1.43
GTF3A-201ENST00000381140 DACT2Q5SW24 774 aa23.96■■□□□ 1.43
GTF3A-201ENST00000381140 FBXO33Q7Z6M2 555 aa23.96■■□□□ 1.43
GTF3A-201ENST00000381140 EXOC6BQ9Y2D4 811 aa23.96■■□□□ 1.43
GTF3A-201ENST00000381140 SASH1O94885 1247 aa23.95■■□□□ 1.42
GTF3A-201ENST00000381140 ADORA1P30542 326 aa23.95■■□□□ 1.42
GTF3A-201ENST00000381140 TIMM10P62072 90 aa23.95■■□□□ 1.42
GTF3A-201ENST00000381140 SIRT2Q8IXJ6 389 aa23.95■■□□□ 1.42
GTF3A-201ENST00000381140 DPF2Q92785 391 aa23.95■■□□□ 1.42
GTF3A-201ENST00000381140 NEUROD6Q96NK8 337 aa23.95■■□□□ 1.42
GTF3A-201ENST00000381140 AKAP2Q9Y2D5 859 aa23.95■■□□□ 1.42
GTF3A-201ENST00000381140 A0A1B0GUL7 405 aa23.94■■□□□ 1.42
GTF3A-201ENST00000381140 CHAF1AQ13111 956 aaPredicted RBP23.94■■□□□ 1.42
GTF3A-201ENST00000381140 RBM26Q5T8P6 1007 aaKnown RBP23.94■■□□□ 1.42
GTF3A-201ENST00000381140 PNMA8AQ86V59 439 aaPredicted RBP23.94■■□□□ 1.42
GTF3A-201ENST00000381140 AGBL3Q8NEM8 1001 aa23.94■■□□□ 1.42
GTF3A-201ENST00000381140 TDRD7Q8NHU6 1098 aaKnown RBP23.94■■□□□ 1.42
GTF3A-201ENST00000381140 RBM46Q8TBY0 533 aaKnown RBP23.94■■□□□ 1.42
GTF3A-201ENST00000381140 ADARB2Q9NS39 739 aaKnown RBP23.94■■□□□ 1.42
GTF3A-201ENST00000381140 NOP58Q9Y2X3 529 aaKnown RBP23.94■■□□□ 1.42
GTF3A-201ENST00000381140 APBB1O00213 710 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms