RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 UBE2HP62256 183 aa17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 UPF3BQ9BZI7 483 aaKnown RBP17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 ANO2Q9NQ90 1003 aa17.83■□□□□ 0.44
CCHCR1-201ENST00000376266 H7C1W4 665 aa17.82■□□□□ 0.44
CCHCR1-201ENST00000376266 GNAI3P08754 354 aa17.82■□□□□ 0.44
CCHCR1-201ENST00000376266 ANAPC15P60006 121 aa17.82■□□□□ 0.44
CCHCR1-201ENST00000376266 GIMAP6Q6P9H5 292 aa17.82■□□□□ 0.44
CCHCR1-201ENST00000376266 UTP14AQ9BVJ6 771 aaKnown RBP17.82■□□□□ 0.44
CCHCR1-201ENST00000376266 NUTM1Q86Y26 1132 aa17.82■□□□□ 0.44
CCHCR1-201ENST00000376266 ZBTB38Q8NAP3 1195 aaPredicted RBP17.82■□□□□ 0.44
CCHCR1-201ENST00000376266 UTYO14607 1347 aa17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 NTSR2O95665 410 aa17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 CASP7P55210 303 aa17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 PPP1R42Q7Z4L9 355 aa17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 CTNNA3Q9UI47 895 aa17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 PCCAP05165 728 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 DDR1Q08345 913 aa17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 LRRFIP2Q9Y608 721 aaKnown RBP17.81■□□□□ 0.44
CCHCR1-201ENST00000376266 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
CCHCR1-201ENST00000376266 OSBPL3Q9H4L5 887 aa17.8■□□□□ 0.44
CCHCR1-201ENST00000376266 CARMIL3Q8ND23 1372 aa17.8■□□□□ 0.44
CCHCR1-201ENST00000376266 GNAI2P04899 355 aa17.8■□□□□ 0.44
CCHCR1-201ENST00000376266 MMP10P09238 476 aa17.8■□□□□ 0.44
CCHCR1-201ENST00000376266 SUCLG2Q96I99 432 aa17.8■□□□□ 0.44
CCHCR1-201ENST00000376266 ZBTB7AO95365 584 aa17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 SYCP1Q15431 976 aa17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 KAZALD1Q96I82 304 aa17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 FUCA2Q9BTY2 467 aa17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 POLRMTO00411 1230 aaKnown RBP17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 FIBPO43427 364 aa17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 HMMRO75330 724 aa17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 NAP1L2Q9ULW6 460 aaPredicted RBP17.79■□□□□ 0.44
CCHCR1-201ENST00000376266 SH3TC1Q8TE82 1336 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 ZBTB22O15209 634 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 SERPINB2P05120 415 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 ZSCAN22P10073 491 aaPredicted RBP17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 CDK11BP21127 795 aaKnown RBP17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 ERFEQ4G0M1 354 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 TSHZ3Q63HK5 1081 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 SMTNL1A8MU46 457 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 NPHP1O15259 732 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 PTGS1P23219 599 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 EPHA10Q5JZY3 1008 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 TPTE2Q6XPS3 522 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 SLC16A10Q8TF71 515 aa17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 DDX41Q9UJV9 622 aaKnown RBP17.78■□□□□ 0.44
CCHCR1-201ENST00000376266 IRS4O14654 1257 aaPredicted RBP17.77■□□□□ 0.44
CCHCR1-201ENST00000376266 SLFN14P0C7P3 912 aa17.77■□□□□ 0.44
CCHCR1-201ENST00000376266 RILPL2Q969X0 211 aa17.77■□□□□ 0.44
CCHCR1-201ENST00000376266 C16orf45Q96MC5 204 aaPredicted RBP17.77■□□□□ 0.44
CCHCR1-201ENST00000376266 NYXQ9GZU5 481 aa17.77■□□□□ 0.44
CCHCR1-201ENST00000376266 BICC1Q9H694 974 aaKnown RBP17.77■□□□□ 0.43
CCHCR1-201ENST00000376266 COL24A1Q17RW2 1714 aa17.77■□□□□ 0.43
CCHCR1-201ENST00000376266 SRCAPQ6ZRS2 3230 aa17.76■□□□□ 0.43
CCHCR1-201ENST00000376266 TRIM6-TRIM34B2RNG4 842 aa17.76■□□□□ 0.43
CCHCR1-201ENST00000376266 ATF5Q9Y2D1 282 aaPredicted RBP17.76■□□□□ 0.43
CCHCR1-201ENST00000376266 SOCS7O14512 581 aa17.76■□□□□ 0.43
CCHCR1-201ENST00000376266 CNBD1Q8NA66 436 aa17.76■□□□□ 0.43
CCHCR1-201ENST00000376266 VGLL3A8MV65 326 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 CHMLP26374 656 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 PRR5LQ6MZQ0 368 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 ATP6V1DQ9Y5K8 247 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 PARP3Q9Y6F1 533 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 CDHR2Q9BYE9 1310 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 CASZ1Q86V15 1759 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 STX6O43752 255 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 TNNT1P13805 278 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 KCNJ4P48050 445 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 FOXO4P98177 505 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 NAA30Q147X3 362 aaPredicted RBP17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 MORC2Q9Y6X9 1032 aaPredicted RBP17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 ABCC12Q96J65 1359 aa17.75■□□□□ 0.43
CCHCR1-201ENST00000376266 CCDC66A2RUB6 948 aa17.74■□□□□ 0.43
CCHCR1-201ENST00000376266 DRC7Q8IY82 874 aa17.74■□□□□ 0.43
CCHCR1-201ENST00000376266 CCDC112Q8NEF3 446 aa17.74■□□□□ 0.43
CCHCR1-201ENST00000376266 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
CCHCR1-201ENST00000376266 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
CCHCR1-201ENST00000376266 HDAC5Q9UQL6 1122 aa17.74■□□□□ 0.43
CCHCR1-201ENST00000376266 F13A1P00488 732 aa17.73■□□□□ 0.43
CCHCR1-201ENST00000376266 CCDC186Q7Z3E2 898 aa17.73■□□□□ 0.43
CCHCR1-201ENST00000376266 MTFR1LQ9H019 292 aa17.73■□□□□ 0.43
CCHCR1-201ENST00000376266 SYT1P21579 422 aa17.73■□□□□ 0.43
CCHCR1-201ENST00000376266 LMBR1LQ6UX01 489 aa17.73■□□□□ 0.43
CCHCR1-201ENST00000376266 PAXBP1Q9Y5B6 917 aa17.73■□□□□ 0.43
CCHCR1-201ENST00000376266 PNMA6EA0A0J9YXQ4 647 aa17.72■□□□□ 0.43
CCHCR1-201ENST00000376266 TERF2Q15554 542 aa17.72■□□□□ 0.43
CCHCR1-201ENST00000376266 C3orf67Q6ZVT6 689 aa17.72■□□□□ 0.43
CCHCR1-201ENST00000376266 KIF18AQ8NI77 898 aa17.72■□□□□ 0.43
CCHCR1-201ENST00000376266 PLA2G12BQ9BX93 195 aa17.72■□□□□ 0.43
CCHCR1-201ENST00000376266 PDE8AO60658 829 aa17.72■□□□□ 0.43
CCHCR1-201ENST00000376266 EXOC6BQ9Y2D4 811 aa17.72■□□□□ 0.43
CCHCR1-201ENST00000376266 CHMP3Q9Y3E7 222 aa17.72■□□□□ 0.43
CCHCR1-201ENST00000376266 LRMPQ12912 555 aa17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 SLC10A5Q5PT55 438 aa17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 KRT222Q8N1A0 295 aa17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 SRGAP3O43295 1099 aa17.71■□□□□ 0.43
CCHCR1-201ENST00000376266 CTSWP56202 376 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms