RNA–Protein interactions for RNA: ENST00000372837.3

CHCHD1-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

TSL 2 BASIC

Gene CHCHD1, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-202ENST00000372837 C2orf69Q8N8R5 385 aa15.6■□□□□ 0.09
CHCHD1-202ENST00000372837 PHACTR3Q96KR7 559 aa15.6■□□□□ 0.09
CHCHD1-202ENST00000372837 BAG4O95429 457 aaKnown RBP15.59■□□□□ 0.09
CHCHD1-202ENST00000372837 MBD3O95983 291 aa15.59■□□□□ 0.09
CHCHD1-202ENST00000372837 ZNRF3Q9ULT6 936 aa15.59■□□□□ 0.09
CHCHD1-202ENST00000372837 NIP7Q9Y221 180 aaKnown RBP eCLIP15.59■□□□□ 0.09
CHCHD1-202ENST00000372837 PTPRCP08575 1304 aa15.59■□□□□ 0.09
CHCHD1-202ENST00000372837 CDHR2Q9BYE9 1310 aa15.59■□□□□ 0.09
CHCHD1-202ENST00000372837 TBC1D8O95759 1140 aa15.58■□□□□ 0.08
CHCHD1-202ENST00000372837 PIP4K2AP48426 406 aaPredicted RBP15.58■□□□□ 0.08
CHCHD1-202ENST00000372837 GRIPAP1Q4V328 841 aa15.58■□□□□ 0.08
CHCHD1-202ENST00000372837 KIAA1211Q6ZU35 1233 aa15.58■□□□□ 0.08
CHCHD1-202ENST00000372837 GAS2L3Q86XJ1 694 aa15.58■□□□□ 0.08
CHCHD1-202ENST00000372837 DDX49Q9Y6V7 483 aaKnown RBP15.58■□□□□ 0.08
CHCHD1-202ENST00000372837 ERBB4Q15303 1308 aa15.58■□□□□ 0.08
CHCHD1-202ENST00000372837 INTS3Q68E01 1043 aaKnown RBP15.57■□□□□ 0.08
CHCHD1-202ENST00000372837 ZNF790Q6PG37 636 aa15.57■□□□□ 0.08
CHCHD1-202ENST00000372837 CASC1Q6TDU7 716 aa15.57■□□□□ 0.08
CHCHD1-202ENST00000372837 KRT26Q7Z3Y9 468 aa15.57■□□□□ 0.08
CHCHD1-202ENST00000372837 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
CHCHD1-202ENST00000372837 CCDC39Q9UFE4 941 aa15.57■□□□□ 0.08
CHCHD1-202ENST00000372837 ZNF652Q9Y2D9 606 aa15.57■□□□□ 0.08
CHCHD1-202ENST00000372837 KIAA0100Q14667 2235 aaKnown RBP15.56■□□□□ 0.08
CHCHD1-202ENST00000372837 HTTP42858 3142 aa15.56■□□□□ 0.08
CHCHD1-202ENST00000372837 RASAL3Q86YV0 1011 aa15.56■□□□□ 0.08
CHCHD1-202ENST00000372837 IL17RAQ96F46 866 aa15.56■□□□□ 0.08
CHCHD1-202ENST00000372837 CNOT7Q9UIV1 285 aaKnown RBP15.56■□□□□ 0.08
CHCHD1-202ENST00000372837 ABCC12Q96J65 1359 aa15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 ADM5C9JUS6 153 aa15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 GPR25O00155 361 aa15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 CHL1O00533 1208 aa15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 ST18O60284 1047 aa15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 HOXA10P31260 410 aaPredicted RBP15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 UVSSAQ2YD98 709 aa15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 TBC1D9Q6ZT07 1266 aa15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 RPAP2Q8IXW5 612 aaPredicted RBP15.55■□□□□ 0.08
CHCHD1-202ENST00000372837 PPEF1O14829 653 aaPredicted RBP15.54■□□□□ 0.08
CHCHD1-202ENST00000372837 HTATSF1O43719 755 aaKnown RBP15.54■□□□□ 0.08
CHCHD1-202ENST00000372837 RAD17O75943 681 aa15.54■□□□□ 0.08
CHCHD1-202ENST00000372837 MTHFSDQ2M296 383 aaKnown RBP15.54■□□□□ 0.08
CHCHD1-202ENST00000372837 ANKRD45Q5TZF3 282 aa15.54■□□□□ 0.08
CHCHD1-202ENST00000372837 FAM184AQ8NB25 1140 aa15.54■□□□□ 0.08
CHCHD1-202ENST00000372837 LNPKQ9C0E8 428 aa15.54■□□□□ 0.08
CHCHD1-202ENST00000372837 ZKSCAN5Q9Y2L8 839 aa15.54■□□□□ 0.08
CHCHD1-202ENST00000372837 H7C1D1 291 aa15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 REC8O95072 547 aa15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 GTF2E1P29083 439 aaPredicted RBP15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 SAMD7Q7Z3H4 446 aa15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 MICALL2Q8IY33 904 aa15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 SMAP1Q8IYB5 467 aaPredicted RBP15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 TSPYL6Q8N831 410 aa15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 RPGRQ92834 1020 aaKnown RBP15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 SYAP1Q96A49 352 aaPredicted RBP15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 VPS33BQ9H267 617 aa15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 DCTPP1Q9H773 170 aa15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 COL6A3P12111 3177 aa15.53■□□□□ 0.08
CHCHD1-202ENST00000372837 EGFRP00533 1210 aa15.52■□□□□ 0.08
CHCHD1-202ENST00000372837 NOM1Q5C9Z4 860 aaKnown RBP15.52■□□□□ 0.08
CHCHD1-202ENST00000372837 NUTM1Q86Y26 1132 aa15.52■□□□□ 0.08
CHCHD1-202ENST00000372837 OTUD5Q96G74 571 aa15.52■□□□□ 0.08
CHCHD1-202ENST00000372837 FMNL2Q96PY5 1086 aa15.52■□□□□ 0.08
CHCHD1-202ENST00000372837 LMBRD1Q9NUN5 540 aa15.52■□□□□ 0.08
CHCHD1-202ENST00000372837 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
CHCHD1-202ENST00000372837 RIC1Q4ADV7 1423 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 HMMRO75330 724 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 EN2P19622 333 aaPredicted RBP15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 HMGN5P82970 282 aaKnown RBP15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 MAPK8IP2Q13387 824 aaPredicted RBP15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 TNIP1Q15025 636 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 LRSAM1Q6UWE0 723 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 ANKRD44Q8N8A2 993 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 C8orf58Q8NAV2 365 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 GAS2L2Q8NHY3 880 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 CRAMP1Q96RY5 1269 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 THUMPD2Q9BTF0 503 aaKnown RBP15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 BABAM1Q9NWV8 329 aa15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 RANBP2P49792 3224 aaKnown RBP15.51■□□□□ 0.07
CHCHD1-202ENST00000372837 POLR2AP24928 1970 aaKnown RBP15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 RGL2O15211 777 aa15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 KCNQ3O43525 872 aa15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 LETM1O95202 739 aaPredicted RBP15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 HLFQ16534 295 aa15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 TBC1D10BQ4KMP7 808 aaPredicted RBP15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 SASS6Q6UVJ0 657 aa15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 SPRYD3Q8NCJ5 442 aa15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 INTS4Q96HW7 963 aaKnown RBP15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 PRIMPOLQ96LW4 560 aa15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 RTFDC1Q9BY42 306 aaPredicted RBP15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 CHMP4AQ9BY43 222 aa15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 ZBTB12Q9Y330 459 aaPredicted RBP15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 BRCA2P51587 3418 aa15.5■□□□□ 0.07
CHCHD1-202ENST00000372837 PRAMEF22A3QJZ6 481 aa15.49■□□□□ 0.07
CHCHD1-202ENST00000372837 YDJCA8MPS7 323 aa15.49■□□□□ 0.07
CHCHD1-202ENST00000372837 FKTNO75072 461 aa15.49■□□□□ 0.07
CHCHD1-202ENST00000372837 ANAPC15P60006 121 aa15.49■□□□□ 0.07
CHCHD1-202ENST00000372837 ZSCAN23Q3MJ62 389 aa15.49■□□□□ 0.07
CHCHD1-202ENST00000372837 RTF1Q92541 710 aaKnown RBP15.49■□□□□ 0.07
CHCHD1-202ENST00000372837 DCPSQ96C86 337 aaKnown RBP15.49■□□□□ 0.07
CHCHD1-202ENST00000372837 USP26Q9BXU7 913 aa15.49■□□□□ 0.07
CHCHD1-202ENST00000372837 R3HDMLQ9H3Y0 253 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms