RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 MCAMP43121 646 aa23.63■■□□□ 1.37
LHX3-202ENST00000371748 FNBP4Q8N3X1 1017 aaPredicted RBP23.63■■□□□ 1.37
LHX3-202ENST00000371748 OSBP2Q969R2 916 aa23.63■■□□□ 1.37
LHX3-202ENST00000371748 DSCC1Q9BVC3 393 aa23.63■■□□□ 1.37
LHX3-202ENST00000371748 SEC31BQ9NQW1 1179 aa23.63■■□□□ 1.37
LHX3-202ENST00000371748 LRP5O75197 1615 aa23.63■■□□□ 1.37
LHX3-202ENST00000371748 LAMA4Q16363 1823 aa23.62■■□□□ 1.37
LHX3-202ENST00000371748 HSPD1P10809 573 aaKnown RBP23.62■■□□□ 1.37
LHX3-202ENST00000371748 ANKRD1Q15327 319 aa23.62■■□□□ 1.37
LHX3-202ENST00000371748 MYH7P12883 1935 aa23.62■■□□□ 1.37
LHX3-202ENST00000371748 TCHHQ07283 1943 aa23.62■■□□□ 1.37
LHX3-202ENST00000371748 NTSR2O95665 410 aa23.62■■□□□ 1.37
LHX3-202ENST00000371748 ALDH8A1Q9H2A2 487 aaPredicted RBP23.62■■□□□ 1.37
LHX3-202ENST00000371748 ABCC12Q96J65 1359 aa23.61■■□□□ 1.37
LHX3-202ENST00000371748 A0A0G2JLW4 131 aa23.61■■□□□ 1.37
LHX3-202ENST00000371748 STX6O43752 255 aa23.61■■□□□ 1.37
LHX3-202ENST00000371748 WASHC4Q2M389 1173 aa23.61■■□□□ 1.37
LHX3-202ENST00000371748 STOX1Q6ZVD7 989 aa23.61■■□□□ 1.37
LHX3-202ENST00000371748 USP21Q9UK80 565 aa23.61■■□□□ 1.37
LHX3-202ENST00000371748 BCORQ6W2J9 1755 aa23.61■■□□□ 1.37
LHX3-202ENST00000371748 GPT2Q8TD30 523 aa23.6■■□□□ 1.37
LHX3-202ENST00000371748 TRIM44Q96DX7 344 aaPredicted RBP23.6■■□□□ 1.37
LHX3-202ENST00000371748 LRRFIP1Q32MZ4 808 aaKnown RBP23.59■■□□□ 1.37
LHX3-202ENST00000371748 CAVIN1Q6NZI2 390 aaKnown RBP23.59■■□□□ 1.37
LHX3-202ENST00000371748 ZNF831Q5JPB2 1677 aa23.59■■□□□ 1.37
LHX3-202ENST00000371748 MYO5AQ9Y4I1 1855 aaKnown RBP23.59■■□□□ 1.37
LHX3-202ENST00000371748 ZSCAN22P10073 491 aaPredicted RBP23.59■■□□□ 1.37
LHX3-202ENST00000371748 FAM182BQ5T319 152 aa23.59■■□□□ 1.37
LHX3-202ENST00000371748 SMIM5Q71RC9 77 aa23.59■■□□□ 1.37
LHX3-202ENST00000371748 MROH5Q6ZUA9 1318 aa23.59■■□□□ 1.37
LHX3-202ENST00000371748 PHKA1P46020 1223 aa23.58■■□□□ 1.37
LHX3-202ENST00000371748 STK3Q13188 491 aa23.58■■□□□ 1.37
LHX3-202ENST00000371748 ZNF652Q9Y2D9 606 aa23.58■■□□□ 1.37
LHX3-202ENST00000371748 PUM3Q15397 648 aaKnown RBP23.58■■□□□ 1.37
LHX3-202ENST00000371748 CCDC102BQ68D86 513 aa23.58■■□□□ 1.37
LHX3-202ENST00000371748 Q6ZUG5 572 aa23.58■■□□□ 1.37
LHX3-202ENST00000371748 MPHOSPH8Q99549 860 aa23.58■■□□□ 1.37
LHX3-202ENST00000371748 LAMB2P55268 1798 aa23.58■■□□□ 1.36
LHX3-202ENST00000371748 SNAP23O00161 211 aa23.57■■□□□ 1.36
LHX3-202ENST00000371748 ZFYP08048 801 aaPredicted RBP23.57■■□□□ 1.36
LHX3-202ENST00000371748 LRRC2Q9BYS8 371 aa23.57■■□□□ 1.36
LHX3-202ENST00000371748 GDPD2Q9HCC8 539 aa23.57■■□□□ 1.36
LHX3-202ENST00000371748 CCDC152Q4G0S7 254 aa23.57■■□□□ 1.36
LHX3-202ENST00000371748 PUS7LQ9H0K6 701 aaKnown RBP23.57■■□□□ 1.36
LHX3-202ENST00000371748 NSFL1CQ9UNZ2 370 aaKnown RBP23.57■■□□□ 1.36
LHX3-202ENST00000371748 FGFR2P21802 821 aa23.56■■□□□ 1.36
LHX3-202ENST00000371748 TTLL5Q6EMB2 1281 aa23.56■■□□□ 1.36
LHX3-202ENST00000371748 LPIN2Q92539 896 aa23.56■■□□□ 1.36
LHX3-202ENST00000371748 ZNF512BQ96KM6 892 aaPredicted RBP23.56■■□□□ 1.36
LHX3-202ENST00000371748 BTAF1O14981 1849 aa23.56■■□□□ 1.36
LHX3-202ENST00000371748 ARAP2Q8WZ64 1704 aa23.56■■□□□ 1.36
LHX3-202ENST00000371748 APPBP2Q92624 585 aa23.56■■□□□ 1.36
LHX3-202ENST00000371748 RBM27Q9P2N5 1060 aaKnown RBP23.55■■□□□ 1.36
LHX3-202ENST00000371748 FOXP2O15409 715 aa23.55■■□□□ 1.36
LHX3-202ENST00000371748 F13A1P00488 732 aa23.55■■□□□ 1.36
LHX3-202ENST00000371748 SPATA31A6Q5VVP1 1343 aa23.54■■□□□ 1.36
LHX3-202ENST00000371748 PIH1D3Q9NQM4 214 aaKnown RBP23.54■■□□□ 1.36
LHX3-202ENST00000371748 E7EWF7 191 aa23.54■■□□□ 1.36
LHX3-202ENST00000371748 ARID4AP29374 1257 aaPredicted RBP23.54■■□□□ 1.36
LHX3-202ENST00000371748 CLEC4GQ6UXB4 293 aa23.54■■□□□ 1.36
LHX3-202ENST00000371748 PPP1R9BQ96SB3 815 aa23.54■■□□□ 1.36
LHX3-202ENST00000371748 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.54■■□□□ 1.36
LHX3-202ENST00000371748 MTMR6Q9Y217 621 aa23.54■■□□□ 1.36
LHX3-202ENST00000371748 THSD7AQ9UPZ6 1657 aa23.53■■□□□ 1.36
LHX3-202ENST00000371748 HSP90B1P14625 803 aaKnown RBP23.53■■□□□ 1.36
LHX3-202ENST00000371748 NASPP49321 788 aaPredicted RBP23.53■■□□□ 1.36
LHX3-202ENST00000371748 BICDL1Q6ZP65 573 aa23.53■■□□□ 1.36
LHX3-202ENST00000371748 BRF1Q92994 677 aa23.53■■□□□ 1.36
LHX3-202ENST00000371748 COL4A1P02462 1669 aa23.53■■□□□ 1.36
LHX3-202ENST00000371748 CNTNAP4Q9C0A0 1308 aa23.53■■□□□ 1.36
LHX3-202ENST00000371748 VPS37CA5D8V6 355 aaPredicted RBP23.52■■□□□ 1.36
LHX3-202ENST00000371748 SLC5A1P13866 664 aa23.52■■□□□ 1.36
LHX3-202ENST00000371748 IGHMBP2P38935 993 aaKnown RBP23.52■■□□□ 1.36
LHX3-202ENST00000371748 CCDC173Q0VFZ6 552 aa23.52■■□□□ 1.36
LHX3-202ENST00000371748 ERFEQ4G0M1 354 aa23.52■■□□□ 1.36
LHX3-202ENST00000371748 DHX32Q7L7V1 743 aaKnown RBP23.52■■□□□ 1.36
LHX3-202ENST00000371748 IDH1O75874 414 aaKnown RBP23.52■■□□□ 1.36
LHX3-202ENST00000371748 HMGB1P09429 215 aaKnown RBP23.52■■□□□ 1.36
LHX3-202ENST00000371748 FGD1P98174 961 aa23.52■■□□□ 1.36
LHX3-202ENST00000371748 ZSCAN23Q3MJ62 389 aa23.52■■□□□ 1.36
LHX3-202ENST00000371748 CNPY2Q9Y2B0 182 aa23.52■■□□□ 1.36
LHX3-202ENST00000371748 GPAA1O43292 621 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 UQCRFS1P1P0C7P4 283 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 ADD2P35612 726 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 TTF1Q15361 905 aaPredicted RBP23.51■■□□□ 1.35
LHX3-202ENST00000371748 SLC9C2Q5TAH2 1124 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 USP48Q86UV5 1035 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 LARP1BQ659C4 914 aaKnown RBP23.51■■□□□ 1.35
LHX3-202ENST00000371748 CASZ1Q86V15 1759 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 RTL9Q8NET4 1388 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 TAF1P21675 1872 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 NHSQ6T4R5 1651 aa23.51■■□□□ 1.35
LHX3-202ENST00000371748 HAND2P61296 217 aa23.5■■□□□ 1.35
LHX3-202ENST00000371748 C3orf67Q6ZVT6 689 aa23.5■■□□□ 1.35
LHX3-202ENST00000371748 GTF3C6Q969F1 213 aa23.5■■□□□ 1.35
LHX3-202ENST00000371748 GADD45BO75293 160 aaPredicted RBP23.5■■□□□ 1.35
LHX3-202ENST00000371748 FGAP02671 866 aa23.5■■□□□ 1.35
LHX3-202ENST00000371748 ZSCAN25Q6NSZ9 544 aa23.5■■□□□ 1.35
LHX3-202ENST00000371748 TMEM63CQ9P1W3 806 aa23.5■■□□□ 1.35
LHX3-202ENST00000371748 SCN7AQ01118 1682 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms