RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 COG6Q9Y2V7 657 aa12.58□□□□□ -0.4
TPM3-210ENST00000368530 SPDYE2BA6NHP3 402 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 SPDYE6P0CI01 402 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 RLBP1P12271 317 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 ZNF280AP59817 542 aaPredicted RBP12.57□□□□□ -0.4
TPM3-210ENST00000368530 PDE3AQ14432 1141 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 SPDYE2Q495Y8 402 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 C8orf58Q8NAV2 365 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 GMLQ99445 158 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 ZC3H12CQ9C0D7 883 aaKnown RBP12.57□□□□□ -0.4
TPM3-210ENST00000368530 SCN9AQ15858 1988 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 ZNF609O15014 1411 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
TPM3-210ENST00000368530 VAMP4O75379 141 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 PCCAP05165 728 aaPredicted RBP12.57□□□□□ -0.4
TPM3-210ENST00000368530 KIF4BQ2VIQ3 1234 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
TPM3-210ENST00000368530 ZKSCAN2Q63HK3 967 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 CCDC191Q8NCU4 936 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 JARID2Q92833 1246 aaPredicted RBP12.57□□□□□ -0.4
TPM3-210ENST00000368530 DCPSQ96C86 337 aaKnown RBP12.57□□□□□ -0.4
TPM3-210ENST00000368530 MYD88Q99836 296 aa12.57□□□□□ -0.4
TPM3-210ENST00000368530 NOB1Q9ULX3 412 aaKnown RBP12.57□□□□□ -0.4
TPM3-210ENST00000368530 KIF23Q02241 960 aaPredicted RBP12.56□□□□□ -0.4
TPM3-210ENST00000368530 MLLT1Q03111 559 aaPredicted RBP12.56□□□□□ -0.4
TPM3-210ENST00000368530 C2orf69Q8N8R5 385 aa12.56□□□□□ -0.4
TPM3-210ENST00000368530 CASP8AP2Q9UKL3 1982 aa12.55□□□□□ -0.4
TPM3-210ENST00000368530 PDE8AO60658 829 aa12.55□□□□□ -0.4
TPM3-210ENST00000368530 UFL1O94874 794 aa12.55□□□□□ -0.4
TPM3-210ENST00000368530 SLC34A2O95436 690 aa12.55□□□□□ -0.4
TPM3-210ENST00000368530 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
TPM3-210ENST00000368530 RSBN1LQ6PCB5 846 aaPredicted RBP12.55□□□□□ -0.4
TPM3-210ENST00000368530 FTSJ3Q8IY81 847 aaKnown RBP12.55□□□□□ -0.4
TPM3-210ENST00000368530 CCDC102AQ96A19 550 aa12.55□□□□□ -0.4
TPM3-210ENST00000368530 METTL22Q9BUU2 404 aaPredicted RBP12.55□□□□□ -0.4
TPM3-210ENST00000368530 GGA3Q9NZ52 723 aa12.55□□□□□ -0.4
TPM3-210ENST00000368530 GGA1Q9UJY5 639 aa12.55□□□□□ -0.4
TPM3-210ENST00000368530 POLR2AP24928 1970 aaKnown RBP12.55□□□□□ -0.4
TPM3-210ENST00000368530 DGKZQ13574 1117 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 SCARF1Q14162 830 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 CCDC152Q4G0S7 254 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 AGBL3Q8NEM8 1001 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 CDCA5Q96FF9 252 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 CSRNP1Q96S65 589 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 RNF186Q9NXI6 227 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 SAGE1Q9NXZ1 904 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 ANKIB1Q9P2G1 1089 aa12.54□□□□□ -0.4
TPM3-210ENST00000368530 IGKV5-2P06315 115 aa12.53□□□□□ -0.4
TPM3-210ENST00000368530 SLC10A3P09131 477 aa12.53□□□□□ -0.4
TPM3-210ENST00000368530 ZNF157P51786 506 aaPredicted RBP12.53□□□□□ -0.4
TPM3-210ENST00000368530 SULF1Q8IWU6 871 aa12.53□□□□□ -0.4
TPM3-210ENST00000368530 DZIP1LQ8IYY4 767 aaKnown RBP12.53□□□□□ -0.4
TPM3-210ENST00000368530 MRPL50Q8N5N7 158 aaKnown RBP12.53□□□□□ -0.4
TPM3-210ENST00000368530 CCDC85AQ96PX6 553 aaPredicted RBP12.53□□□□□ -0.4
TPM3-210ENST00000368530 TSHZ2Q9NRE2 1034 aa12.53□□□□□ -0.4
TPM3-210ENST00000368530 CWC25Q9NXE8 425 aaPredicted RBP12.53□□□□□ -0.4
TPM3-210ENST00000368530 XDHP47989 1333 aa12.53□□□□□ -0.4
TPM3-210ENST00000368530 KIF16BQ96L93 1317 aa12.53□□□□□ -0.4
TPM3-210ENST00000368530 TRIM27P14373 513 aa12.52□□□□□ -0.4
TPM3-210ENST00000368530 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.4
TPM3-210ENST00000368530 ANGEL2Q5VTE6 544 aaKnown RBP12.52□□□□□ -0.4
TPM3-210ENST00000368530 ATF7IPQ6VMQ6 1270 aa12.52□□□□□ -0.4
TPM3-210ENST00000368530 PODNQ7Z5L7 613 aa12.52□□□□□ -0.4
TPM3-210ENST00000368530 TTLL11Q8NHH1 800 aa12.52□□□□□ -0.4
TPM3-210ENST00000368530 IPO8O15397 1037 aaKnown RBP12.52□□□□□ -0.41
TPM3-210ENST00000368530 TRPA1O75762 1119 aa12.52□□□□□ -0.41
TPM3-210ENST00000368530 MYOZ2Q9NPC6 264 aa12.52□□□□□ -0.41
TPM3-210ENST00000368530 MINPP1Q9UNW1 487 aa12.52□□□□□ -0.41
TPM3-210ENST00000368530 SSUH2Q9Y2M2 353 aa12.52□□□□□ -0.41
TPM3-210ENST00000368530 MAP3K2Q9Y2U5 619 aa12.52□□□□□ -0.41
TPM3-210ENST00000368530 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
TPM3-210ENST00000368530 USP17L3A6NCW0 530 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 USP17L4A6NCW7 530 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 USP17L8P0C7I0 530 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 MS4A1P11836 297 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 ATP2B4P23634 1241 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 MVPQ14764 893 aaKnown RBP12.51□□□□□ -0.41
TPM3-210ENST00000368530 CCDC30Q5VVM6 783 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 KSR2Q6VAB6 950 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 USP17L1Q7RTZ2 530 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 RASAL3Q86YV0 1011 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 ANKRD18AQ8IVF6 992 aa12.51□□□□□ -0.41
TPM3-210ENST00000368530 PITPNM2Q9BZ72 1349 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 PI4KAP2A4QPH2 592 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 G3V3G9 751 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 CTSWP56202 376 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 NBPF9Q3BBW0 867 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 DACT2Q5SW24 774 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 DCAF8Q5TAQ9 597 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 MOB2Q70IA6 237 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 TXNRD3Q86VQ6 643 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 ITPRIPQ8IWB1 547 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 PI4KAP1Q8N8J0 262 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 MXD3Q9BW11 206 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 GREM2Q9H772 168 aa12.5□□□□□ -0.41
TPM3-210ENST00000368530 BSDC1Q9NW68 430 aaPredicted RBP12.5□□□□□ -0.41
TPM3-210ENST00000368530 SCAF8Q9UPN6 1271 aaKnown RBP12.5□□□□□ -0.41
TPM3-210ENST00000368530 H7C1W4 665 aa12.49□□□□□ -0.41
TPM3-210ENST00000368530 DDX58O95786 925 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms