RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 CTU1Q7Z7A3 348 aaKnown RBP1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 RASAL3Q86YV0 1011 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 CDAN1Q8IWY9 1227 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 FAM9BQ8IZU0 186 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 OGFOD1Q8N543 542 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 TTLL11Q8NHH1 800 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 ZC3H15Q8WU90 426 aaKnown RBP1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 CNKSR2Q8WXI2 1034 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 DPF2Q92785 391 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 SLC10A4Q96EP9 437 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 CLMNQ96JQ2 1002 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 PRMT6Q96LA8 375 aaPredicted RBP1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 MPHOSPH8Q99549 860 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 METTL22Q9BUU2 404 aaPredicted RBP1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 PUS3Q9BZE2 481 aaKnown RBP1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 VPS33BQ9H267 617 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 VEZTQ9HBM0 779 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 SPINK5Q9NQ38 1064 aaPredicted RBP1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 CWC25Q9NXE8 425 aaPredicted RBP1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 HPS5Q9UPZ3 1129 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 TRIM17Q9Y577 477 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 CASP8AP2Q9UKL3 1982 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 SCN11AQ9UI33 1791 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 LTBP1Q14766 1721 aa1.97□□□□□ -2.09
RNU1-42P-201ENST00000364033 ARFGEF1Q9Y6D6 1849 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZNF804BA4D1E1 1349 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 ERBB4Q15303 1308 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 ANKRD18BA2A2Z9 1011 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 NEURL1BA8MQ27 555 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 H7C1W4 665 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 RGL2O15211 777 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 VAMP4O75379 141 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 FRAT2O75474 233 aaPredicted RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 USP2O75604 605 aaPredicted RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 DDX58O95786 925 aaKnown RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZNF853P0CG23 659 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 SLURP2P0DP57 97 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 ITGA6P23229 1130 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 RPS12P25398 132 aaKnown RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 GJA5P36382 358 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 GYG1P46976 350 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 TM4SF4P48230 202 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CTSWP56202 376 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 ZNF280AP59817 542 aaPredicted RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 GNAI1P63096 354 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CAP1Q01518 475 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 EXOSC9Q06265 439 aaKnown RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CHRNDQ07001 517 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 NEXNQ0ZGT2 675 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 TRIM28Q13263 835 aaKnown RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 FKBP5Q13451 457 aaPredicted RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 GCKRQ14397 625 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 DLGAP5Q15398 846 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 GRIK5Q16478 980 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 TWISTNBQ3B726 338 aaPredicted RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CFAP100Q494V2 611 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 TAF7LQ5H9L4 462 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 DACT2Q5SW24 774 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 SPRYD7Q5W111 196 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 LMBR1LQ6UX01 489 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 MIGA2Q7L4E1 593 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 ARMC9Q7Z3E5 817 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 PODNQ7Z5L7 613 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CERS5Q8N5B7 392 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CCDC191Q8NCU4 936 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 KLHDC4Q8TBB5 520 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CD99L2Q8TCZ2 262 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 HHIPL1Q96JK4 782 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 GMLQ99445 158 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CDC5LQ99459 802 aaKnown RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 PTPN18Q99952 460 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 STK31Q9BXU1 1019 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 COA1Q9GZY4 146 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 BCL11AQ9H165 835 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 DEFB129Q9H1M3 183 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 TDRD3Q9H7E2 651 aaKnown RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 ELP3Q9H9T3 547 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 CD209Q9NNX6 404 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 BSDC1Q9NW68 430 aaPredicted RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 PPP4R2Q9NY27 417 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 PODXL2Q9NZ53 605 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 SUPT16HQ9Y5B9 1047 aaKnown RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 SNED1Q8TER0 1413 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 COL11A2P13942 1736 aaPredicted RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 TAF1P21675 1872 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 BRCA1P38398 1863 aaKnown RBP1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 FER1L6Q2WGJ9 1857 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 COL4A1P02462 1669 aa1.96□□□□□ -2.1
RNU1-42P-201ENST00000364033 XDHP47989 1333 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 MYBBP1AQ9BQG0 1328 aaKnown RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 NRXN2Q9P2S2 1712 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 ANKRD26Q9UPS8 1709 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 IGF2BP3O00425 579 aaKnown RBP eCLIP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 CA12O43570 354 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 PPP1R12BO60237 982 aaPredicted RBP1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 FKTNO75072 461 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 CSF1RP07333 972 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 NF2P35240 595 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 BCAMP50895 628 aa1.95□□□□□ -2.1
RNU1-42P-201ENST00000364033 FOXO4P98177 505 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms