RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 PDE1AP54750 535 aa25.29■■□□□ 1.64
SHISA4-201ENST00000362011 TMC4Q7Z404 712 aa25.29■■□□□ 1.64
SHISA4-201ENST00000362011 GPATCH3Q96I76 525 aa25.29■■□□□ 1.64
SHISA4-201ENST00000362011 MINPP1Q9UNW1 487 aa25.29■■□□□ 1.64
SHISA4-201ENST00000362011 FER1L6Q2WGJ9 1857 aa25.28■■□□□ 1.64
SHISA4-201ENST00000362011 A0A1B0GUL7 405 aa25.28■■□□□ 1.64
SHISA4-201ENST00000362011 ATP2B3Q16720 1220 aa25.28■■□□□ 1.64
SHISA4-201ENST00000362011 HELBQ8NG08 1087 aaPredicted RBP25.28■■□□□ 1.64
SHISA4-201ENST00000362011 ZNF622Q969S3 477 aaKnown RBP eCLIP25.28■■□□□ 1.64
SHISA4-201ENST00000362011 OSBPL3Q9H4L5 887 aa25.28■■□□□ 1.64
SHISA4-201ENST00000362011 STAP2Q9UGK3 403 aa25.28■■□□□ 1.64
SHISA4-201ENST00000362011 AOX1Q06278 1338 aa25.28■■□□□ 1.64
SHISA4-201ENST00000362011 LTBP3Q9NS15 1303 aa25.28■■□□□ 1.64
SHISA4-201ENST00000362011 PUM3Q15397 648 aaKnown RBP25.27■■□□□ 1.64
SHISA4-201ENST00000362011 NEUROD6Q96NK8 337 aa25.27■■□□□ 1.64
SHISA4-201ENST00000362011 ANKRD2Q9GZV1 360 aa25.27■■□□□ 1.64
SHISA4-201ENST00000362011 PCNTO95613 3336 aa25.27■■□□□ 1.64
SHISA4-201ENST00000362011 DICER1Q9UPY3 1922 aaKnown RBP25.26■■□□□ 1.63
SHISA4-201ENST00000362011 TTC41PQ6P2S7 1318 aa25.26■■□□□ 1.63
SHISA4-201ENST00000362011 PPEF1O14829 653 aaPredicted RBP25.26■■□□□ 1.63
SHISA4-201ENST00000362011 TIMM10P62072 90 aa25.26■■□□□ 1.63
SHISA4-201ENST00000362011 TLR7Q9NYK1 1049 aaKnown RBP25.26■■□□□ 1.63
SHISA4-201ENST00000362011 AKAP11Q9UKA4 1901 aa25.26■■□□□ 1.63
SHISA4-201ENST00000362011 C21orf2O43822 256 aa25.25■■□□□ 1.63
SHISA4-201ENST00000362011 TAF5LO75529 589 aa25.25■■□□□ 1.63
SHISA4-201ENST00000362011 DBNDD2Q9BQY9 259 aa25.25■■□□□ 1.63
SHISA4-201ENST00000362011 DBNLQ9UJU6 430 aaKnown RBP25.25■■□□□ 1.63
SHISA4-201ENST00000362011 SLC5A1P13866 664 aa25.24■■□□□ 1.63
SHISA4-201ENST00000362011 FGFR2P21802 821 aa25.24■■□□□ 1.63
SHISA4-201ENST00000362011 DPY19L2Q6NUT2 758 aa25.24■■□□□ 1.63
SHISA4-201ENST00000362011 LPIN2Q92539 896 aa25.24■■□□□ 1.63
SHISA4-201ENST00000362011 CNKSR1Q969H4 720 aa25.24■■□□□ 1.63
SHISA4-201ENST00000362011 MYH7P12883 1935 aa25.24■■□□□ 1.63
SHISA4-201ENST00000362011 TTC22Q5TAA0 569 aa25.23■■□□□ 1.63
SHISA4-201ENST00000362011 ECHDC1Q9NTX5 307 aa25.23■■□□□ 1.63
SHISA4-201ENST00000362011 ERC2O15083 957 aa25.22■■□□□ 1.63
SHISA4-201ENST00000362011 IFIT1P09914 478 aaKnown RBP25.22■■□□□ 1.63
SHISA4-201ENST00000362011 UBE4AQ14139 1066 aa25.22■■□□□ 1.63
SHISA4-201ENST00000362011 TSHZ3Q63HK5 1081 aa25.22■■□□□ 1.63
SHISA4-201ENST00000362011 SP8Q8IXZ3 490 aa25.22■■□□□ 1.63
SHISA4-201ENST00000362011 XAGE2Q96GT9 111 aa25.22■■□□□ 1.63
SHISA4-201ENST00000362011 XDHP47989 1333 aa25.21■■□□□ 1.63
SHISA4-201ENST00000362011 ATP6V0A2Q9Y487 856 aa25.21■■□□□ 1.63
SHISA4-201ENST00000362011 GLRX3O76003 335 aaKnown RBP25.2■■□□□ 1.62
SHISA4-201ENST00000362011 ADORA1P30542 326 aa25.2■■□□□ 1.62
SHISA4-201ENST00000362011 KCNJ4P48050 445 aa25.2■■□□□ 1.62
SHISA4-201ENST00000362011 GORABQ5T7V8 394 aa25.2■■□□□ 1.62
SHISA4-201ENST00000362011 PI4K2BQ8TCG2 481 aa25.2■■□□□ 1.62
SHISA4-201ENST00000362011 BMP2KLQ5H9B9 411 aa25.19■■□□□ 1.62
SHISA4-201ENST00000362011 PRPF40BQ6NWY9 871 aaKnown RBP25.19■■□□□ 1.62
SHISA4-201ENST00000362011 TMX4Q9H1E5 349 aaPredicted RBP25.19■■□□□ 1.62
SHISA4-201ENST00000362011 TAOK3Q9H2K8 898 aa25.19■■□□□ 1.62
SHISA4-201ENST00000362011 ANKIB1Q9P2G1 1089 aa25.19■■□□□ 1.62
SHISA4-201ENST00000362011 MYO5AQ9Y4I1 1855 aaKnown RBP25.19■■□□□ 1.62
SHISA4-201ENST00000362011 GPSM2P81274 684 aa25.18■■□□□ 1.62
SHISA4-201ENST00000362011 CCDC158Q5M9N0 1113 aa25.18■■□□□ 1.62
SHISA4-201ENST00000362011 LEMD3Q9Y2U8 911 aa25.18■■□□□ 1.62
SHISA4-201ENST00000362011 SNAP23O00161 211 aa25.17■■□□□ 1.62
SHISA4-201ENST00000362011 GSPT1P15170 499 aaKnown RBP25.17■■□□□ 1.62
SHISA4-201ENST00000362011 C7orf43Q8WVR3 580 aa25.17■■□□□ 1.62
SHISA4-201ENST00000362011 ZNF804BA4D1E1 1349 aa25.17■■□□□ 1.62
SHISA4-201ENST00000362011 ATP5JP18859 108 aa25.16■■□□□ 1.62
SHISA4-201ENST00000362011 ATP2B4P23634 1241 aa25.16■■□□□ 1.62
SHISA4-201ENST00000362011 TTC39AQ5SRH9 613 aa25.16■■□□□ 1.62
SHISA4-201ENST00000362011 SOGA3Q5TF21 947 aa25.16■■□□□ 1.62
SHISA4-201ENST00000362011 SLC51AQ86UW1 340 aa25.16■■□□□ 1.62
SHISA4-201ENST00000362011 PODXL2Q9NZ53 605 aa25.16■■□□□ 1.62
SHISA4-201ENST00000362011 ZNF219Q9P2Y4 722 aaPredicted RBP25.16■■□□□ 1.62
SHISA4-201ENST00000362011 DUOX1Q9NRD9 1551 aa25.16■■□□□ 1.62
SHISA4-201ENST00000362011 DOCK2Q92608 1830 aa25.16■■□□□ 1.62
SHISA4-201ENST00000362011 HSPA1AP0DMV8 641 aaKnown RBP25.15■■□□□ 1.62
SHISA4-201ENST00000362011 HSPA1BP0DMV9 641 aaKnown RBP25.15■■□□□ 1.62
SHISA4-201ENST00000362011 NSFL1CQ9UNZ2 370 aaKnown RBP25.15■■□□□ 1.62
SHISA4-201ENST00000362011 GGA1Q9UJY5 639 aa25.14■■□□□ 1.62
SHISA4-201ENST00000362011 DDNO94850 711 aaPredicted RBP25.13■■□□□ 1.61
SHISA4-201ENST00000362011 CHADLQ6NUI6 762 aa25.13■■□□□ 1.61
SHISA4-201ENST00000362011 TNS4Q8IZW8 715 aa25.13■■□□□ 1.61
SHISA4-201ENST00000362011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.13■■□□□ 1.61
SHISA4-201ENST00000362011 BOLA2Q9H3K6 86 aa25.13■■□□□ 1.61
SHISA4-201ENST00000362011 UFL1O94874 794 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 UQCRFS1P1P0C7P4 283 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 CCDC102BQ68D86 513 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 CC2D2BQ6DHV5 1058 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 MPNDQ8N594 471 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 L3MBTL3Q96JM7 780 aaPredicted RBP25.12■■□□□ 1.61
SHISA4-201ENST00000362011 CREBZFQ9NS37 354 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 WTIPA6NIX2 430 aaPredicted RBP25.12■■□□□ 1.61
SHISA4-201ENST00000362011 TRIM6-TRIM34B2RNG4 842 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 SDSP20132 328 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 PHKA1P46020 1223 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 CAVIN4Q5BKX8 364 aa25.12■■□□□ 1.61
SHISA4-201ENST00000362011 ZNF512BQ96KM6 892 aaPredicted RBP25.12■■□□□ 1.61
SHISA4-201ENST00000362011 POTEIP0CG38 1075 aa25.11■■□□□ 1.61
SHISA4-201ENST00000362011 POTEJP0CG39 1038 aa25.11■■□□□ 1.61
SHISA4-201ENST00000362011 ARID4AP29374 1257 aaPredicted RBP25.11■■□□□ 1.61
SHISA4-201ENST00000362011 DPP8Q6V1X1 898 aaPredicted RBP25.11■■□□□ 1.61
SHISA4-201ENST00000362011 C15orf52Q6ZUT6 534 aaKnown RBP25.11■■□□□ 1.61
SHISA4-201ENST00000362011 CNTROBQ8N137 903 aa25.11■■□□□ 1.61
SHISA4-201ENST00000362011 MAP4K4O95819 1239 aaPredicted RBP25.1■■□□□ 1.61
SHISA4-201ENST00000362011 OLFM4Q6UX06 510 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms