RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 RABL2AQ9UBK7 228 aaPredicted RBP10.48□□□□□ -0.73
CALD1-201ENST00000361675 DNAI1Q9UI46 699 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 TTC21BQ7Z4L5 1316 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 C3P01024 1663 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 XBP1P17861 261 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 MX1P20591 662 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 C1QTNF12Q5T7M4 302 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 CACTINQ8WUQ7 758 aaKnown RBP10.48□□□□□ -0.73
CALD1-201ENST00000361675 ERCC4Q92889 916 aaPredicted RBP10.48□□□□□ -0.73
CALD1-201ENST00000361675 FHOD1Q9Y613 1164 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 MON2Q7Z3U7 1717 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 SKAP2O75563 359 aaPredicted RBP10.48□□□□□ -0.73
CALD1-201ENST00000361675 NFE2L2Q16236 605 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 KIF2CQ99661 725 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 ACBD3Q9H3P7 528 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 KNDC1Q76NI1 1749 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 PLEKHG1Q9ULL1 1385 aa10.48□□□□□ -0.73
CALD1-201ENST00000361675 SHTN1A0MZ66 631 aa10.47□□□□□ -0.73
CALD1-201ENST00000361675 CLNS1AP54105 237 aaKnown RBP10.47□□□□□ -0.73
CALD1-201ENST00000361675 EIF4A2Q14240 407 aaKnown RBP10.47□□□□□ -0.73
CALD1-201ENST00000361675 VEZTQ9HBM0 779 aa10.47□□□□□ -0.73
CALD1-201ENST00000361675 ZDHHC9Q9Y397 364 aa10.47□□□□□ -0.73
CALD1-201ENST00000361675 MCM2P49736 904 aa10.47□□□□□ -0.73
CALD1-201ENST00000361675 C8orf58Q8NAV2 365 aa10.47□□□□□ -0.73
CALD1-201ENST00000361675 ARPC5LQ9BPX5 153 aa10.47□□□□□ -0.73
CALD1-201ENST00000361675 MBIPQ9NS73 344 aa10.47□□□□□ -0.73
CALD1-201ENST00000361675 DDX19BQ9UMR2 479 aa10.47□□□□□ -0.73
CALD1-201ENST00000361675 AKAP12Q02952 1782 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
CALD1-201ENST00000361675 ATF7IPQ6VMQ6 1270 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 TAF4BQ92750 862 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 CEP89Q96ST8 783 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 AP5Z1O43299 807 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 VAMP4O75379 141 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 OATP04181 439 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 CCDC30Q5VVM6 783 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 TADA2BQ86TJ2 420 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 CTCFLQ8NI51 663 aaPredicted RBP10.46□□□□□ -0.73
CALD1-201ENST00000361675 ZNF396Q96N95 335 aaPredicted RBP10.46□□□□□ -0.73
CALD1-201ENST00000361675 CARD6Q9BX69 1037 aa10.46□□□□□ -0.73
CALD1-201ENST00000361675 RGPD8O14715 1765 aaPredicted RBP10.46□□□□□ -0.74
CALD1-201ENST00000361675 HDGFP51858 240 aaKnown RBP10.46□□□□□ -0.74
CALD1-201ENST00000361675 SULT6B1Q6IMI4 303 aa10.46□□□□□ -0.74
CALD1-201ENST00000361675 TMX3Q96JJ7 454 aa10.46□□□□□ -0.74
CALD1-201ENST00000361675 ARHGEF10LQ9HCE6 1279 aa10.46□□□□□ -0.74
CALD1-201ENST00000361675 PEAK1Q9H792 1746 aa10.46□□□□□ -0.74
CALD1-201ENST00000361675 CCDC171Q6TFL3 1326 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 FOXO3O43524 673 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 EVCP57679 992 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 NFXL1Q6ZNB6 911 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 LRRN4CLQ8ND94 238 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 TRIM6Q9C030 488 aaPredicted RBP10.45□□□□□ -0.74
CALD1-201ENST00000361675 USP16Q9Y5T5 823 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 IL16Q14005 1332 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 ANO6Q4KMQ2 910 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 LMBRD2Q68DH5 695 aaPredicted RBP10.45□□□□□ -0.74
CALD1-201ENST00000361675 FMNL3Q8IVF7 1028 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.45□□□□□ -0.74
CALD1-201ENST00000361675 C1orf131Q8NDD1 294 aaKnown RBP10.45□□□□□ -0.74
CALD1-201ENST00000361675 THOC1Q96FV9 657 aaKnown RBP10.45□□□□□ -0.74
CALD1-201ENST00000361675 MRFAP1L1Q96HT8 127 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 AATKQ6ZMQ8 1374 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 CDK12Q9NYV4 1490 aaPredicted RBP10.45□□□□□ -0.74
CALD1-201ENST00000361675 NCOA3Q9Y6Q9 1424 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 PTPRCP08575 1304 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 HMGB1P1B2RPK0 211 aaPredicted RBP10.45□□□□□ -0.74
CALD1-201ENST00000361675 KCNA6P17658 529 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 MCM10Q7L590 875 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 TNMDQ9H2S6 317 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 ITM2BQ9Y287 266 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 DLG5Q8TDM6 1919 aa10.45□□□□□ -0.74
CALD1-201ENST00000361675 PLEKHG3A1L390 1219 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 CCDC69A6NI79 296 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 BMP2KLQ5H9B9 411 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 DZIP1Q86YF9 867 aaKnown RBP10.44□□□□□ -0.74
CALD1-201ENST00000361675 CCDC47Q96A33 483 aaKnown RBP10.44□□□□□ -0.74
CALD1-201ENST00000361675 KLF15Q9UIH9 416 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 MRFAP1Q9Y605 127 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 PPFIA3O75145 1194 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 AP1G2O75843 785 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 CLEC17AQ6ZS10 378 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 FAM200AQ8TCP9 573 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 BICD2Q8TD16 824 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 TRAIPQ9BWF2 469 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 USP6P35125 1406 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 RPSAP08865 295 aaKnown RBP10.44□□□□□ -0.74
CALD1-201ENST00000361675 GBP2P32456 591 aaPredicted RBP10.44□□□□□ -0.74
CALD1-201ENST00000361675 MAP3K11Q16584 847 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 FERMT3Q86UX7 667 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 NUP62CLQ9H1M0 184 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 SPATS2LQ9NUQ6 558 aaKnown RBP10.44□□□□□ -0.74
CALD1-201ENST00000361675 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.44□□□□□ -0.74
CALD1-201ENST00000361675 NRKQ7Z2Y5 1582 aa10.44□□□□□ -0.74
CALD1-201ENST00000361675 ITSN1Q15811 1721 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 OVOS2A0A0J9YW53 1432 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 OVOS2Q6IE36 1432 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 FLT3P36888 993 aa10.43□□□□□ -0.74
CALD1-201ENST00000361675 INTS3Q68E01 1043 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms