RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 NCOA7Q8NI08 942 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 JAKMIP2Q96AA8 810 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 UBA5Q9GZZ9 404 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.92□□□□□ -0.82
COL6A6-201ENST00000358511 MTRF1LQ9UGC7 380 aaKnown RBP9.92□□□□□ -0.82
COL6A6-201ENST00000358511 KRT13P13646 458 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 ZNF76P36508 570 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 UBLCP1Q8WVY7 318 aaPredicted RBP9.92□□□□□ -0.82
COL6A6-201ENST00000358511 USP26Q9BXU7 913 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 PIK3C2GO75747 1445 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 LUC7L3O95232 432 aaKnown RBP9.92□□□□□ -0.82
COL6A6-201ENST00000358511 ARID4AP29374 1257 aaPredicted RBP9.92□□□□□ -0.82
COL6A6-201ENST00000358511 MYL5Q02045 173 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 CCDC122Q5T0U0 273 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 KIF1BO60333 1816 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 MYH10P35580 1976 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 IFIT3O14879 490 aaKnown RBP9.92□□□□□ -0.82
COL6A6-201ENST00000358511 ATP2A1O14983 1001 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 RRAGBQ5VZM2 374 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 IFT20Q8IY31 132 aa9.92□□□□□ -0.82
COL6A6-201ENST00000358511 IFIT1P09914 478 aaKnown RBP9.92□□□□□ -0.82
COL6A6-201ENST00000358511 MPHOSPH10O00566 681 aaKnown RBP9.91□□□□□ -0.82
COL6A6-201ENST00000358511 IDEP14735 1019 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 VCX3BQ9H321 246 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 ARHGAP6O43182 974 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
COL6A6-201ENST00000358511 CCDC38Q502W7 563 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 BICDL2A1A5D9 508 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 AK2P54819 239 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 TMEM67Q5HYA8 995 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 CWC25Q9NXE8 425 aaPredicted RBP9.91□□□□□ -0.82
COL6A6-201ENST00000358511 CEP85LQ5SZL2 805 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 F6X3S4 739 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 CIB2O75838 187 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 LMBRD1Q9NUN5 540 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 C8orf74Q6P047 294 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 EFCC1Q9HA90 598 aa9.91□□□□□ -0.82
COL6A6-201ENST00000358511 BLMP54132 1417 aaPredicted RBP9.91□□□□□ -0.82
COL6A6-201ENST00000358511 ANKRD44Q8N8A2 993 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 BRF1Q92994 677 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 MIS18AQ9NYP9 233 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 GIGYF1O75420 1035 aaPredicted RBP9.9□□□□□ -0.82
COL6A6-201ENST00000358511 AFMP43652 599 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 ABCC5O15440 1437 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 TCERG1LQ5VWI1 586 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 CYP26C1Q6V0L0 522 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 SPAG5Q96R06 1193 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 SPATS2LQ9NUQ6 558 aaKnown RBP9.9□□□□□ -0.82
COL6A6-201ENST00000358511 RNF123Q5XPI4 1314 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 ZNF365Q70YC5 407 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 RPGRIP1Q96KN7 1286 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 SERPINA10Q9UK55 444 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 PRG4Q92954 1404 aaPredicted RBP9.9□□□□□ -0.82
COL6A6-201ENST00000358511 MARCKSP29966 332 aaPredicted RBP9.9□□□□□ -0.82
COL6A6-201ENST00000358511 NLRP5P59047 1200 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 MAP3K12Q12852 859 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 RUFY4Q6ZNE9 571 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 EFCAB13Q8IY85 973 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 MRVI1Q9Y6F6 885 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 NUP160Q12769 1436 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 TTF1Q15361 905 aaPredicted RBP9.9□□□□□ -0.82
COL6A6-201ENST00000358511 PPP1R42Q7Z4L9 355 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 PPP1R12CQ9BZL4 782 aa9.9□□□□□ -0.82
COL6A6-201ENST00000358511 ZWINTO95229 277 aa9.9□□□□□ -0.83
COL6A6-201ENST00000358511 RUFY3Q7L099 469 aa9.9□□□□□ -0.83
COL6A6-201ENST00000358511 CCDC110Q8TBZ0 833 aa9.9□□□□□ -0.83
COL6A6-201ENST00000358511 MBIPQ9NS73 344 aa9.9□□□□□ -0.83
COL6A6-201ENST00000358511 NKIRAS1Q9NYS0 192 aa9.9□□□□□ -0.83
COL6A6-201ENST00000358511 EFCAB8A8MWE9 144 aa9.9□□□□□ -0.83
COL6A6-201ENST00000358511 ACTN2P35609 894 aa9.9□□□□□ -0.83
COL6A6-201ENST00000358511 TTC41PQ6P2S7 1318 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 HMGXB3Q12766 1538 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 RLBP1P12271 317 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 Q6ZUG5 572 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.89□□□□□ -0.83
COL6A6-201ENST00000358511 SLC26A6Q9BXS9 759 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 TAF7Q15545 349 aaPredicted RBP9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CCDC82Q8N4S0 544 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 TSNARE1Q96NA8 513 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 DNAI2Q9GZS0 605 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 SPINK5Q9NQ38 1064 aaPredicted RBP9.89□□□□□ -0.83
COL6A6-201ENST00000358511 RBM8AQ9Y5S9 174 aaKnown RBP9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CAPN7Q9Y6W3 813 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 VIMP08670 466 aaKnown RBP9.89□□□□□ -0.83
COL6A6-201ENST00000358511 METTL24Q5JXM2 366 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 STXBP4Q6ZWJ1 553 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 PLEKHM2Q8IWE5 1019 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 NEK11Q8NG66 645 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CLSTN2Q9H4D0 955 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 UGGT2Q9NYU1 1516 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 TNIP1Q15025 636 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CCDC26Q8TAB7 109 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 MICAL1Q8TDZ2 1067 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 SEC62Q99442 399 aaKnown RBP9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CARD6Q9BX69 1037 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 FAM184BQ9ULE4 1060 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 CEP128Q6ZU80 1094 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 KIAA1524Q8TCG1 905 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 ANAPC4Q9UJX5 808 aa9.89□□□□□ -0.83
COL6A6-201ENST00000358511 ZNF853P0CG23 659 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms