RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 LMBR1Q8WVP7 490 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 NAP1L3Q99457 506 aaPredicted RBP18.22■□□□□ 0.51
RXRA-201ENST00000356384 IQSEC3Q9UPP2 1182 aaPredicted RBP18.22■□□□□ 0.51
RXRA-201ENST00000356384 ANXA1P04083 346 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 TBC1D32Q96NH3 1257 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 ECM2O94769 699 aaPredicted RBP18.22■□□□□ 0.51
RXRA-201ENST00000356384 CAPN2P17655 700 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 KIF5AQ12840 1032 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 RHPN1Q8TCX5 695 aa18.22■□□□□ 0.51
RXRA-201ENST00000356384 ZWINTO95229 277 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 NAPAP54920 295 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 TEX13AQ9BXU3 409 aaPredicted RBP18.21■□□□□ 0.51
RXRA-201ENST00000356384 PIK3R4Q99570 1358 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 CALM1P0DP23 149 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 CALM2P0DP24 149 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 CALM3P0DP25 149 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 CFAP58Q5T655 872 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 GOLGA1Q92805 767 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 EIF4G3O43432 1585 aaKnown RBP18.21■□□□□ 0.51
RXRA-201ENST00000356384 F8W031 263 aaPredicted RBP18.21■□□□□ 0.51
RXRA-201ENST00000356384 MAP3K9P80192 1104 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 TPD52P55327 224 aaPredicted RBP18.21■□□□□ 0.51
RXRA-201ENST00000356384 FAM212AQ96EL1 285 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 MBIPQ9NS73 344 aa18.21■□□□□ 0.51
RXRA-201ENST00000356384 FAM83GA6ND36 823 aa18.21■□□□□ 0.5
RXRA-201ENST00000356384 IGHDP01880 384 aa18.21■□□□□ 0.5
RXRA-201ENST00000356384 KRT83P78385 493 aa18.21■□□□□ 0.5
RXRA-201ENST00000356384 Q6ZUG5 572 aa18.21■□□□□ 0.5
RXRA-201ENST00000356384 PLCD3Q8N3E9 789 aa18.21■□□□□ 0.5
RXRA-201ENST00000356384 WDR70Q9NW82 654 aa18.21■□□□□ 0.5
RXRA-201ENST00000356384 DNAJC21Q5F1R6 531 aaKnown RBP18.2■□□□□ 0.5
RXRA-201ENST00000356384 VTI1AQ96AJ9 217 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 LMOD1P29536 600 aaPredicted RBP18.2■□□□□ 0.5
RXRA-201ENST00000356384 TMTC2Q8N394 836 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 SMARCC2Q8TAQ2 1214 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 KRT86O43790 486 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 IFNL2Q8IZJ0 200 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 IFT81Q8WYA0 676 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 CCDC42Q96M95 316 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 RBM8AQ9Y5S9 174 aaKnown RBP18.2■□□□□ 0.5
RXRA-201ENST00000356384 TLDC2A0PJX2 215 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 ZEB2O60315 1214 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 SDSP20132 328 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 GUCA1BQ9UMX6 200 aa18.2■□□□□ 0.5
RXRA-201ENST00000356384 SLU7O95391 586 aaKnown RBP18.19■□□□□ 0.5
RXRA-201ENST00000356384 RFC4P35249 363 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 PICALMQ13492 652 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 KARSQ15046 597 aaKnown RBP18.19■□□□□ 0.5
RXRA-201ENST00000356384 CNNM2Q9H8M5 875 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 CCDC152Q4G0S7 254 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 AKNAD1Q5T1N1 836 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 FAM13AO94988 1023 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 CCDC25Q86WR0 208 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 KCNK9Q9NPC2 374 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 VPS18Q9P253 973 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 ADGRL1O94910 1474 aa18.19■□□□□ 0.5
RXRA-201ENST00000356384 DNM1Q05193 864 aaKnown RBP18.18■□□□□ 0.5
RXRA-201ENST00000356384 NBPF6Q5VWK0 638 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 CPLX4Q7Z7G2 160 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 NBPF5PQ86XG9 351 aaPredicted RBP18.18■□□□□ 0.5
RXRA-201ENST00000356384 NBPF4Q96M43 638 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 TXNDC16Q9P2K2 825 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 RTL1A6NKG5 1358 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 LZTFL1Q9NQ48 299 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 WDR97A6NE52 1622 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 SBNO2Q9Y2G9 1366 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 STX17P56962 302 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 UBXN1Q04323 297 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 C6orf50Q9HD87 102 aa18.18■□□□□ 0.5
RXRA-201ENST00000356384 DHX29Q7Z478 1369 aaKnown RBP18.18■□□□□ 0.5
RXRA-201ENST00000356384 ZFYP08048 801 aaPredicted RBP18.17■□□□□ 0.5
RXRA-201ENST00000356384 KRT28Q7Z3Y7 464 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 PPP1R9BQ96SB3 815 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 GNAQP50148 359 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 ST5P78524 1137 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 ATP6V0A2Q9Y487 856 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 CEP83Q9Y592 693 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 RHOXF2BP0C7M4 288 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 RHOXF2Q9BQY4 288 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 NOL3O60936 208 aaKnown RBP18.17■□□□□ 0.5
RXRA-201ENST00000356384 SNRPA1P09661 255 aaKnown RBP18.17■□□□□ 0.5
RXRA-201ENST00000356384 NEK11Q8NG66 645 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 ACSBG1Q96GR2 724 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 WDR62O43379 1518 aa18.17■□□□□ 0.5
RXRA-201ENST00000356384 TRIM75PA6NK02 468 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 EBAG9O00559 213 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 TRAF1Q13077 416 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 MCMDC2Q4G0Z9 681 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 F13A1P00488 732 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 ZNF569Q5MCW4 686 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 SMC1BQ8NDV3 1235 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 ATP2B3Q16720 1220 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 FAM169AQ9Y6X4 670 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 SPTLC2O15270 562 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 PLS1Q14651 629 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 PPP1R7Q15435 360 aa18.16■□□□□ 0.5
RXRA-201ENST00000356384 KRT79Q5XKE5 535 aa18.15■□□□□ 0.5
RXRA-201ENST00000356384 ODF2LQ9ULJ1 636 aa18.15■□□□□ 0.5
RXRA-201ENST00000356384 PBRM1Q86U86 1689 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms