RNA–Protein interactions for RNA: ENST00000353334.10

CD74-202, Transcript of CD74 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD74, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD74-202ENST00000353334 PPP4R2Q9NY27 417 aa16.68■□□□□ 0.26
CD74-202ENST00000353334 TMPOP42166 694 aaKnown RBP16.67■□□□□ 0.26
CD74-202ENST00000353334 HABP4Q5JVS0 413 aaKnown RBP16.67■□□□□ 0.26
CD74-202ENST00000353334 ZBTB47Q9UFB7 747 aaPredicted RBP16.67■□□□□ 0.26
CD74-202ENST00000353334 WTIPA6NIX2 430 aaPredicted RBP16.66■□□□□ 0.26
CD74-202ENST00000353334 FKTNO75072 461 aa16.66■□□□□ 0.26
CD74-202ENST00000353334 GCC1Q96CN9 775 aa16.66■□□□□ 0.26
CD74-202ENST00000353334 CCDC85AQ96PX6 553 aaPredicted RBP16.66■□□□□ 0.26
CD74-202ENST00000353334 MXD3Q9BW11 206 aa16.66■□□□□ 0.26
CD74-202ENST00000353334 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
CD74-202ENST00000353334 SPEF2Q9C093 1822 aa16.66■□□□□ 0.26
CD74-202ENST00000353334 USP17L3A6NCW0 530 aa16.65■□□□□ 0.26
CD74-202ENST00000353334 USP17L4A6NCW7 530 aa16.65■□□□□ 0.26
CD74-202ENST00000353334 CHL1O00533 1208 aa16.65■□□□□ 0.26
CD74-202ENST00000353334 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
CD74-202ENST00000353334 NOM1Q5C9Z4 860 aaKnown RBP16.65■□□□□ 0.26
CD74-202ENST00000353334 USP17L1Q7RTZ2 530 aa16.65■□□□□ 0.26
CD74-202ENST00000353334 IPO9Q96P70 1041 aaKnown RBP16.65■□□□□ 0.26
CD74-202ENST00000353334 MKI67P46013 3256 aaKnown RBP16.65■□□□□ 0.26
CD74-202ENST00000353334 POTEFA5A3E0 1075 aa16.64■□□□□ 0.25
CD74-202ENST00000353334 PTPN12Q05209 780 aaKnown RBP16.64■□□□□ 0.25
CD74-202ENST00000353334 LMOD3Q0VAK6 560 aa16.64■□□□□ 0.25
CD74-202ENST00000353334 PRKG1Q13976 671 aa16.64■□□□□ 0.25
CD74-202ENST00000353334 JARID2Q92833 1246 aaPredicted RBP16.64■□□□□ 0.25
CD74-202ENST00000353334 XDHP47989 1333 aa16.63■□□□□ 0.25
CD74-202ENST00000353334 SREBF2Q12772 1141 aa16.63■□□□□ 0.25
CD74-202ENST00000353334 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
CD74-202ENST00000353334 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
CD74-202ENST00000353334 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
CD74-202ENST00000353334 FAM43AQ8N2R8 423 aa16.63■□□□□ 0.25
CD74-202ENST00000353334 ZBTB38Q8NAP3 1195 aaPredicted RBP16.63■□□□□ 0.25
CD74-202ENST00000353334 ZMYND15Q9H091 742 aa16.63■□□□□ 0.25
CD74-202ENST00000353334 DBF4Q9UBU7 674 aaPredicted RBP16.63■□□□□ 0.25
CD74-202ENST00000353334 SASH1O94885 1247 aa16.62■□□□□ 0.25
CD74-202ENST00000353334 RBBP6Q7Z6E9 1792 aaKnown RBP16.62■□□□□ 0.25
CD74-202ENST00000353334 NF2P35240 595 aa16.62■□□□□ 0.25
CD74-202ENST00000353334 CCDC152Q4G0S7 254 aa16.62■□□□□ 0.25
CD74-202ENST00000353334 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
CD74-202ENST00000353334 FBXW7Q969H0 707 aa16.62■□□□□ 0.25
CD74-202ENST00000353334 CFHR5Q9BXR6 569 aa16.62■□□□□ 0.25
CD74-202ENST00000353334 HYPKQ9NX55 129 aa16.62■□□□□ 0.25
CD74-202ENST00000353334 FZD1Q9UP38 647 aa16.62■□□□□ 0.25
CD74-202ENST00000353334 WNT10BO00744 389 aa16.61■□□□□ 0.25
CD74-202ENST00000353334 DACT2Q5SW24 774 aa16.61■□□□□ 0.25
CD74-202ENST00000353334 SPRYD7Q5W111 196 aa16.61■□□□□ 0.25
CD74-202ENST00000353334 PODNQ7Z5L7 613 aa16.61■□□□□ 0.25
CD74-202ENST00000353334 TRIM17Q9Y577 477 aa16.61■□□□□ 0.25
CD74-202ENST00000353334 ZNF521Q96K83 1311 aa16.6■□□□□ 0.25
CD74-202ENST00000353334 ATP2B4P23634 1241 aa16.6■□□□□ 0.25
CD74-202ENST00000353334 OTOP1Q7RTM1 612 aa16.6■□□□□ 0.25
CD74-202ENST00000353334 RIC3Q7Z5B4 369 aa16.6■□□□□ 0.25
CD74-202ENST00000353334 ANKRD18AQ8IVF6 992 aa16.6■□□□□ 0.25
CD74-202ENST00000353334 MYD88Q99836 296 aa16.6■□□□□ 0.25
CD74-202ENST00000353334 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
CD74-202ENST00000353334 TRIM35Q9UPQ4 493 aa16.6■□□□□ 0.25
CD74-202ENST00000353334 PDE8AO60658 829 aa16.59■□□□□ 0.25
CD74-202ENST00000353334 HOXB7P09629 217 aa16.59■□□□□ 0.25
CD74-202ENST00000353334 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
CD74-202ENST00000353334 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
CD74-202ENST00000353334 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
CD74-202ENST00000353334 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
CD74-202ENST00000353334 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
CD74-202ENST00000353334 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
CD74-202ENST00000353334 LDLRAD1Q5T700 205 aa16.58■□□□□ 0.24
CD74-202ENST00000353334 OGFOD1Q8N543 542 aa16.58■□□□□ 0.24
CD74-202ENST00000353334 PHAXQ9H814 394 aaKnown RBP16.58■□□□□ 0.24
CD74-202ENST00000353334 ANGEL1Q9UNK9 670 aaKnown RBP16.58■□□□□ 0.24
CD74-202ENST00000353334 CENPFP49454 3210 aa16.58■□□□□ 0.24
CD74-202ENST00000353334 LAMB1P07942 1786 aa16.58■□□□□ 0.24
CD74-202ENST00000353334 KIAA0100Q14667 2235 aaKnown RBP16.57■□□□□ 0.24
CD74-202ENST00000353334 RRP9O43818 475 aaKnown RBP16.57■□□□□ 0.24
CD74-202ENST00000353334 FXR1P51114 621 aaKnown RBP eCLIP16.57■□□□□ 0.24
CD74-202ENST00000353334 IFNL1Q8IU54 200 aa16.57■□□□□ 0.24
CD74-202ENST00000353334 SSC5DA1L4H1 1573 aa16.57■□□□□ 0.24
CD74-202ENST00000353334 IGF2BP3O00425 579 aaKnown RBP eCLIP16.56■□□□□ 0.242e-7■■■■□ 26
CD74-202ENST00000353334 HSP90B1P14625 803 aaKnown RBP16.56■□□□□ 0.24
CD74-202ENST00000353334 CLMNQ96JQ2 1002 aa16.56■□□□□ 0.24
CD74-202ENST00000353334 ALDH1A1P00352 501 aa16.55■□□□□ 0.24
CD74-202ENST00000353334 EN2P19622 333 aaPredicted RBP16.55■□□□□ 0.24
CD74-202ENST00000353334 TXNRD3Q86VQ6 643 aa16.55■□□□□ 0.24
CD74-202ENST00000353334 APOBEC3FQ8IUX4 373 aaKnown RBP16.55■□□□□ 0.24
CD74-202ENST00000353334 CCDC191Q8NCU4 936 aa16.55■□□□□ 0.24
CD74-202ENST00000353334 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
CD74-202ENST00000353334 MYH3P11055 1940 aa16.55■□□□□ 0.24
CD74-202ENST00000353334 MYO3BQ8WXR4 1341 aa16.55■□□□□ 0.24
CD74-202ENST00000353334 MANSC4A6NHS7 340 aaPredicted RBP16.54■□□□□ 0.24
CD74-202ENST00000353334 CTSWP56202 376 aa16.54■□□□□ 0.24
CD74-202ENST00000353334 STRIP1Q5VSL9 837 aa16.54■□□□□ 0.24
CD74-202ENST00000353334 INTS3Q68E01 1043 aaKnown RBP16.54■□□□□ 0.24
CD74-202ENST00000353334 KIAA0825Q8IV33 1275 aa16.54■□□□□ 0.24
CD74-202ENST00000353334 CD99L2Q8TCZ2 262 aa16.54■□□□□ 0.24
CD74-202ENST00000353334 MBIPQ9NS73 344 aa16.54■□□□□ 0.24
CD74-202ENST00000353334 MINPP1Q9UNW1 487 aa16.54■□□□□ 0.24
CD74-202ENST00000353334 KLRK1P26718 216 aa16.53■□□□□ 0.24
CD74-202ENST00000353334 CCT4P50991 539 aaKnown RBP16.53■□□□□ 0.24
CD74-202ENST00000353334 CAP1Q01518 475 aa16.53■□□□□ 0.24
CD74-202ENST00000353334 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
CD74-202ENST00000353334 ZBED3Q96IU2 234 aaPredicted RBP16.53■□□□□ 0.24
CD74-202ENST00000353334 WNK4Q96J92 1243 aa16.53■□□□□ 0.24
CD74-202ENST00000353334 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms