RNA–Protein interactions for RNA: ENST00000352845.3

PKP1-202, Transcript of plakophilin 1, humanhuman

TSL 5 BASIC

Gene PKP1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP1-202ENST00000352845 HSP90B2PQ58FF3 399 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 TMED8Q6PL24 325 aaPredicted RBP12.26□□□□□ -0.45
PKP1-202ENST00000352845 FMNL3Q8IVF7 1028 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 NUDT16Q96DE0 195 aaKnown RBP12.26□□□□□ -0.45
PKP1-202ENST00000352845 LRRCC1Q9C099 1032 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 ADAMTSL3P82987 1691 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 XRN1Q8IZH2 1706 aaKnown RBP12.26□□□□□ -0.45
PKP1-202ENST00000352845 PEAK1Q9H792 1746 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 GOLGA6L9A6NEM1 432 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 GNAI2P04899 355 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 GNAI3P08754 354 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 USP5P45974 858 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 AK2P54819 239 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 DDR1Q08345 913 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 MIEF2Q96C03 454 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 SPATA32Q96LK8 384 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 NAT10Q9H0A0 1025 aaKnown RBP12.26□□□□□ -0.45
PKP1-202ENST00000352845 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
PKP1-202ENST00000352845 H0YHG0 523 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 TUBBP07437 444 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 MAP3K9P80192 1104 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 SARNPP82979 210 aaKnown RBP12.25□□□□□ -0.45
PKP1-202ENST00000352845 TRIM65Q6PJ69 517 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 TICAM2Q86XR7 235 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 RILPL2Q969X0 211 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 FAM212AQ96EL1 285 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 PDE11AQ9HCR9 933 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 ANO10Q9NW15 660 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 AKAP2Q9Y2D5 859 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 AOX1Q06278 1338 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 VPS37CA5D8V6 355 aaPredicted RBP12.25□□□□□ -0.45
PKP1-202ENST00000352845 ZSCAN12O43309 604 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 PPP2R3AQ06190 1150 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 GNL2Q13823 731 aaKnown RBP12.25□□□□□ -0.45
PKP1-202ENST00000352845 VPS53Q5VIR6 699 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 AMOTL2Q9Y2J4 779 aa12.25□□□□□ -0.45
PKP1-202ENST00000352845 NUTM2FA1L443 756 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 IRF6O14896 467 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 GIGYF1O75420 1035 aaPredicted RBP12.24□□□□□ -0.45
PKP1-202ENST00000352845 ATP8B2P98198 1209 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 CEP57L1Q8IYX8 460 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 PLCD4Q9BRC7 762 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 GBP3Q9H0R5 595 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 CHMP3Q9Y3E7 222 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 CCDC61Q9Y6R9 512 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 ITSN1Q15811 1721 aa12.24□□□□□ -0.45
PKP1-202ENST00000352845 ELF1P32519 619 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 NUTM1Q86Y26 1132 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 TBX22Q9Y458 520 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 N4BP2Q86UW6 1770 aaPredicted RBP12.23□□□□□ -0.45
PKP1-202ENST00000352845 DHX40Q8IX18 779 aaKnown RBP12.23□□□□□ -0.45
PKP1-202ENST00000352845 TEX11Q8IYF3 940 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 CNNM3Q8NE01 707 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 BICD2Q8TD16 824 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 LEO1Q8WVC0 666 aaPredicted RBP12.23□□□□□ -0.45
PKP1-202ENST00000352845 FAN1Q9Y2M0 1017 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 MRFAP1Q9Y605 127 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 ARHGEF10O15013 1369 aa12.23□□□□□ -0.45
PKP1-202ENST00000352845 FAM208AQ9UK61 1670 aaKnown RBP12.23□□□□□ -0.45
PKP1-202ENST00000352845 DIP2AQ14689 1571 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 FOXO3O43524 673 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 NR1I2O75469 434 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 BIRC2Q13490 618 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 BEND6Q5SZJ8 279 aaPredicted RBP12.22□□□□□ -0.45
PKP1-202ENST00000352845 ARMCX5Q6P1M9 558 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 C11orf57Q6ZUT1 292 aaPredicted RBP12.22□□□□□ -0.45
PKP1-202ENST00000352845 KAT2BQ92831 832 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 VEZTQ9HBM0 779 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 RAB21Q9UL25 225 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 SNX14Q9Y5W7 946 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 ZNF142P52746 1687 aaPredicted RBP12.22□□□□□ -0.45
PKP1-202ENST00000352845 TOPAZ1Q8N9V7 1692 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 GCFC2P16383 781 aaKnown RBP12.22□□□□□ -0.45
PKP1-202ENST00000352845 GPTP24298 496 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 RDXP35241 583 aaKnown RBP12.22□□□□□ -0.45
PKP1-202ENST00000352845 CRYMQ14894 314 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 LARP1BQ659C4 914 aaKnown RBP12.22□□□□□ -0.45
PKP1-202ENST00000352845 KCNV1Q6PIU1 500 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 RASEFQ8IZ41 740 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 FAXDC2Q96IV6 333 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 CABS1Q96KC9 395 aa12.22□□□□□ -0.45
PKP1-202ENST00000352845 ATXN2Q99700 1313 aaKnown RBP12.21□□□□□ -0.45
PKP1-202ENST00000352845 SETD1BQ9UPS6 1966 aaKnown RBP12.21□□□□□ -0.45
PKP1-202ENST00000352845 TUBB2AQ13885 445 aa12.21□□□□□ -0.45
PKP1-202ENST00000352845 CCDC83Q8IWF9 413 aa12.21□□□□□ -0.45
PKP1-202ENST00000352845 PRPF38AQ8NAV1 312 aaKnown RBP12.21□□□□□ -0.45
PKP1-202ENST00000352845 TUBB2BQ9BVA1 445 aa12.21□□□□□ -0.45
PKP1-202ENST00000352845 HYPKQ9NX55 129 aa12.21□□□□□ -0.45
PKP1-202ENST00000352845 MCM8Q9UJA3 840 aa12.21□□□□□ -0.45
PKP1-202ENST00000352845 SH3BP1Q9Y3L3 701 aa12.21□□□□□ -0.45
PKP1-202ENST00000352845 OVOS2A0A0J9YW53 1432 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 OVOS2Q6IE36 1432 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 LARGE1O95461 756 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 NF2P35240 595 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 MCM6Q14566 821 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 HSP90AB2PQ58FF8 381 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 NBPF6Q5VWK0 638 aa12.21□□□□□ -0.46
PKP1-202ENST00000352845 CWC27Q6UX04 472 aaKnown RBP12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms