RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 IQCA1LA6NCM1 817 aa18.99■□□□□ 0.63
UBE3B-201ENST00000340074 PSMD14O00487 310 aa18.99■□□□□ 0.63
UBE3B-201ENST00000340074 SCNN1DP51172 638 aa18.99■□□□□ 0.63
UBE3B-201ENST00000340074 UBE4AQ14139 1066 aa18.99■□□□□ 0.63
UBE3B-201ENST00000340074 PODNQ7Z5L7 613 aa18.99■□□□□ 0.63
UBE3B-201ENST00000340074 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
UBE3B-201ENST00000340074 FBXO3Q9UK99 471 aa18.99■□□□□ 0.63
UBE3B-201ENST00000340074 MYH13Q9UKX3 1938 aa18.98■□□□□ 0.63
UBE3B-201ENST00000340074 CIAO1O76071 339 aa18.98■□□□□ 0.63
UBE3B-201ENST00000340074 PDE8BO95263 885 aa18.98■□□□□ 0.63
UBE3B-201ENST00000340074 C15orf52Q6ZUT6 534 aaKnown RBP18.98■□□□□ 0.63
UBE3B-201ENST00000340074 COA1Q9GZY4 146 aa18.98■□□□□ 0.63
UBE3B-201ENST00000340074 GMPSP49915 693 aaPredicted RBP18.97■□□□□ 0.63
UBE3B-201ENST00000340074 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
UBE3B-201ENST00000340074 ATP8B2P98198 1209 aa18.97■□□□□ 0.63
UBE3B-201ENST00000340074 TAF1DQ9H5J8 278 aaPredicted RBP18.97■□□□□ 0.63
UBE3B-201ENST00000340074 HACL1Q9UJ83 578 aa18.97■□□□□ 0.63
UBE3B-201ENST00000340074 ZBTB12Q9Y330 459 aaPredicted RBP18.97■□□□□ 0.63
UBE3B-201ENST00000340074 TOMM70O94826 608 aa18.96■□□□□ 0.63
UBE3B-201ENST00000340074 LMOD1P29536 600 aaPredicted RBP18.96■□□□□ 0.63
UBE3B-201ENST00000340074 EPHX2P34913 555 aa18.95■□□□□ 0.62
UBE3B-201ENST00000340074 IL15P40933 162 aaPredicted RBP18.95■□□□□ 0.62
UBE3B-201ENST00000340074 POLA2Q14181 598 aa18.95■□□□□ 0.62
UBE3B-201ENST00000340074 ZNF804AQ7Z570 1209 aa18.95■□□□□ 0.62
UBE3B-201ENST00000340074 CD209Q9NNX6 404 aa18.95■□□□□ 0.62
UBE3B-201ENST00000340074 ZBTB40Q9NUA8 1239 aa18.95■□□□□ 0.62
UBE3B-201ENST00000340074 GPRC5DQ9NZD1 345 aa18.95■□□□□ 0.62
UBE3B-201ENST00000340074 ARAP2Q8WZ64 1704 aa18.95■□□□□ 0.62
UBE3B-201ENST00000340074 USP17L3A6NCW0 530 aa18.94■□□□□ 0.62
UBE3B-201ENST00000340074 USP17L4A6NCW7 530 aa18.94■□□□□ 0.62
UBE3B-201ENST00000340074 VIL1P09327 827 aaKnown RBP18.94■□□□□ 0.62
UBE3B-201ENST00000340074 EPS15P42566 896 aa18.94■□□□□ 0.62
UBE3B-201ENST00000340074 PUM3Q15397 648 aaKnown RBP18.94■□□□□ 0.62
UBE3B-201ENST00000340074 CEP85Q6P2H3 762 aa18.94■□□□□ 0.62
UBE3B-201ENST00000340074 USP17L1Q7RTZ2 530 aa18.94■□□□□ 0.62
UBE3B-201ENST00000340074 SSH3Q8TE77 659 aa18.94■□□□□ 0.62
UBE3B-201ENST00000340074 ADAMTSL1Q8N6G6 1762 aa18.94■□□□□ 0.62
UBE3B-201ENST00000340074 FGFR2P21802 821 aa18.93■□□□□ 0.62
UBE3B-201ENST00000340074 GYG1P46976 350 aa18.93■□□□□ 0.62
UBE3B-201ENST00000340074 C1QTNF8P60827 252 aa18.93■□□□□ 0.62
UBE3B-201ENST00000340074 FAM84BQ96KN1 310 aaPredicted RBP18.93■□□□□ 0.62
UBE3B-201ENST00000340074 CHMP4BQ9H444 224 aaKnown RBP18.93■□□□□ 0.62
UBE3B-201ENST00000340074 CEP126Q9P2H0 1117 aa18.93■□□□□ 0.62
UBE3B-201ENST00000340074 POTEIP0CG38 1075 aa18.92■□□□□ 0.62
UBE3B-201ENST00000340074 POTEJP0CG39 1038 aa18.92■□□□□ 0.62
UBE3B-201ENST00000340074 IL1R1P14778 569 aa18.92■□□□□ 0.62
UBE3B-201ENST00000340074 EAPPQ56P03 285 aaPredicted RBP18.92■□□□□ 0.62
UBE3B-201ENST00000340074 RSBN1LQ6PCB5 846 aaPredicted RBP18.92■□□□□ 0.62
UBE3B-201ENST00000340074 RBM46Q8TBY0 533 aaKnown RBP18.92■□□□□ 0.62
UBE3B-201ENST00000340074 FBXW7Q969H0 707 aa18.92■□□□□ 0.62
UBE3B-201ENST00000340074 CNOT7Q9UIV1 285 aaKnown RBP18.92■□□□□ 0.62
UBE3B-201ENST00000340074 POLR2AP24928 1970 aaKnown RBP18.92■□□□□ 0.62
UBE3B-201ENST00000340074 SHTN1A0MZ66 631 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 RPS12P25398 132 aaKnown RBP18.91■□□□□ 0.62
UBE3B-201ENST00000340074 HIBADHP31937 336 aaKnown RBP18.91■□□□□ 0.62
UBE3B-201ENST00000340074 TTLL5Q6EMB2 1281 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 LPIN2Q92539 896 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 DPF2Q92785 391 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 ZNF609O15014 1411 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 IFIT1P09914 478 aaKnown RBP18.91■□□□□ 0.62
UBE3B-201ENST00000340074 SLC5A1P13866 664 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 GTF2IP78347 998 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 TFCP2Q12800 502 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 G3BP1Q13283 466 aaKnown RBP eCLIP18.91■□□□□ 0.62
UBE3B-201ENST00000340074 DACT2Q5SW24 774 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 STRIP1Q5VSL9 837 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 MICALL2Q8IY33 904 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 MXD3Q9BW11 206 aa18.91■□□□□ 0.62
UBE3B-201ENST00000340074 ATP2B3Q16720 1220 aa18.9■□□□□ 0.62
UBE3B-201ENST00000340074 CAVIN4Q5BKX8 364 aa18.9■□□□□ 0.62
UBE3B-201ENST00000340074 FBXO33Q7Z6M2 555 aa18.9■□□□□ 0.62
UBE3B-201ENST00000340074 PNMA8AQ86V59 439 aaPredicted RBP18.9■□□□□ 0.62
UBE3B-201ENST00000340074 VPS37DQ86XT2 251 aa18.9■□□□□ 0.62
UBE3B-201ENST00000340074 AGBL3Q8NEM8 1001 aa18.9■□□□□ 0.62
UBE3B-201ENST00000340074 ADARB2Q9NS39 739 aaKnown RBP18.9■□□□□ 0.62
UBE3B-201ENST00000340074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.9■□□□□ 0.62
UBE3B-201ENST00000340074 H7C1D1 291 aa18.89■□□□□ 0.61
UBE3B-201ENST00000340074 SURF6O75683 361 aaKnown RBP18.89■□□□□ 0.61
UBE3B-201ENST00000340074 BCAMP50895 628 aa18.89■□□□□ 0.61
UBE3B-201ENST00000340074 LDHDQ86WU2 507 aa18.89■□□□□ 0.61
UBE3B-201ENST00000340074 SMC1BQ8NDV3 1235 aa18.89■□□□□ 0.61
UBE3B-201ENST00000340074 TDRD7Q8NHU6 1098 aaKnown RBP18.89■□□□□ 0.61
UBE3B-201ENST00000340074 GMLQ99445 158 aa18.89■□□□□ 0.61
UBE3B-201ENST00000340074 SASH1O94885 1247 aa18.88■□□□□ 0.61
UBE3B-201ENST00000340074 USP50Q70EL3 339 aaPredicted RBP18.88■□□□□ 0.61
UBE3B-201ENST00000340074 RPAP2Q8IXW5 612 aaPredicted RBP18.88■□□□□ 0.61
UBE3B-201ENST00000340074 JAG2Q9Y219 1238 aa18.88■□□□□ 0.61
UBE3B-201ENST00000340074 CLEC11AQ9Y240 323 aa18.88■□□□□ 0.61
UBE3B-201ENST00000340074 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
UBE3B-201ENST00000340074 FSTL1Q12841 308 aa18.87■□□□□ 0.61
UBE3B-201ENST00000340074 OS9Q13438 667 aaPredicted RBP18.87■□□□□ 0.61
UBE3B-201ENST00000340074 SAMD7Q7Z3H4 446 aa18.87■□□□□ 0.61
UBE3B-201ENST00000340074 SIRT2Q8IXJ6 389 aa18.87■□□□□ 0.61
UBE3B-201ENST00000340074 IQSEC3Q9UPP2 1182 aaPredicted RBP18.87■□□□□ 0.61
UBE3B-201ENST00000340074 AKAP2Q9Y2D5 859 aa18.87■□□□□ 0.61
UBE3B-201ENST00000340074 MYO3BQ8WXR4 1341 aa18.86■□□□□ 0.61
UBE3B-201ENST00000340074 A0A1B0GUL7 405 aa18.86■□□□□ 0.61
UBE3B-201ENST00000340074 TIMM10P62072 90 aa18.86■□□□□ 0.61
UBE3B-201ENST00000340074 CHADLQ6NUI6 762 aa18.86■□□□□ 0.61
UBE3B-201ENST00000340074 TRPM4Q8TD43 1214 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms