RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SPEF2Q9C093 1822 aa17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 CHRNDQ07001 517 aa17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 LMBR1LQ6UX01 489 aa17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 PODNQ7Z5L7 613 aa17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 AIDAQ96BJ3 306 aa17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 DCPSQ96C86 337 aaKnown RBP17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 CDCA7LQ96GN5 454 aa17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 MPHOSPH8Q99549 860 aa17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 TSKSQ9UJT2 592 aa17.01■□□□□ 0.31
NUDCD3-201ENST00000338427 ZNF804BA4D1E1 1349 aa17■□□□□ 0.31
NUDCD3-201ENST00000338427 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
NUDCD3-201ENST00000338427 HSPA8P11142 646 aaKnown RBP17■□□□□ 0.31
NUDCD3-201ENST00000338427 CTCFP49711 727 aaPredicted RBP17■□□□□ 0.31
NUDCD3-201ENST00000338427 ZNF280AP59817 542 aaPredicted RBP17■□□□□ 0.31
NUDCD3-201ENST00000338427 AGBL3Q8NEM8 1001 aa17■□□□□ 0.31
NUDCD3-201ENST00000338427 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
NUDCD3-201ENST00000338427 PLIN1O60240 522 aa16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 USP17L8P0C7I0 530 aa16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 ECE1P42892 770 aa16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 ANGEL2Q5VTE6 544 aaKnown RBP16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 PRAMEF18Q5VWM3 479 aa16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 MRPL50Q8N5N7 158 aaKnown RBP16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 GGA3Q9NZ52 723 aa16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 MYH3P11055 1940 aa16.99■□□□□ 0.31
NUDCD3-201ENST00000338427 HUNKP57058 714 aa16.98■□□□□ 0.31
NUDCD3-201ENST00000338427 MAP2K1Q02750 393 aaPredicted RBP16.98■□□□□ 0.31
NUDCD3-201ENST00000338427 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
NUDCD3-201ENST00000338427 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
NUDCD3-201ENST00000338427 ANKRD2Q9GZV1 360 aa16.98■□□□□ 0.31
NUDCD3-201ENST00000338427 MYOZ2Q9NPC6 264 aa16.98■□□□□ 0.31
NUDCD3-201ENST00000338427 C9orf78Q9NZ63 289 aaPredicted RBP16.98■□□□□ 0.31
NUDCD3-201ENST00000338427 CACNA1FO60840 1977 aa16.97■□□□□ 0.31
NUDCD3-201ENST00000338427 GRM8O00222 908 aa16.97■□□□□ 0.31
NUDCD3-201ENST00000338427 IFIT5Q13325 482 aaKnown RBP16.97■□□□□ 0.31
NUDCD3-201ENST00000338427 TTLL5Q6EMB2 1281 aa16.97■□□□□ 0.31
NUDCD3-201ENST00000338427 SUCLG2Q96I99 432 aa16.97■□□□□ 0.31
NUDCD3-201ENST00000338427 COA1Q9GZY4 146 aa16.97■□□□□ 0.31
NUDCD3-201ENST00000338427 PRDM10Q9NQV6 1147 aa16.97■□□□□ 0.31
NUDCD3-201ENST00000338427 MED23Q9ULK4 1368 aa16.97■□□□□ 0.31
NUDCD3-201ENST00000338427 NBPF7P0C2Y1 421 aaPredicted RBP16.96■□□□□ 0.31
NUDCD3-201ENST00000338427 GTF2IP78347 998 aa16.96■□□□□ 0.31
NUDCD3-201ENST00000338427 SLFN5Q08AF3 891 aa16.96■□□□□ 0.31
NUDCD3-201ENST00000338427 SSH1Q8WYL5 1049 aa16.96■□□□□ 0.31
NUDCD3-201ENST00000338427 PUS3Q9BZE2 481 aaKnown RBP16.96■□□□□ 0.31
NUDCD3-201ENST00000338427 SRCIN1Q9C0H9 1055 aa16.96■□□□□ 0.31
NUDCD3-201ENST00000338427 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.31
NUDCD3-201ENST00000338427 KCNJ4P48050 445 aa16.95■□□□□ 0.3
NUDCD3-201ENST00000338427 MOB2Q70IA6 237 aa16.95■□□□□ 0.3
NUDCD3-201ENST00000338427 SULF1Q8IWU6 871 aa16.95■□□□□ 0.3
NUDCD3-201ENST00000338427 CDCA5Q96FF9 252 aa16.95■□□□□ 0.3
NUDCD3-201ENST00000338427 CD209Q9NNX6 404 aa16.95■□□□□ 0.3
NUDCD3-201ENST00000338427 JAG2Q9Y219 1238 aa16.95■□□□□ 0.3
NUDCD3-201ENST00000338427 IRS2Q9Y4H2 1338 aa16.95■□□□□ 0.3
NUDCD3-201ENST00000338427 ALDH1L1O75891 902 aa16.94■□□□□ 0.3
NUDCD3-201ENST00000338427 MAP2K2P36507 400 aa16.94■□□□□ 0.3
NUDCD3-201ENST00000338427 STRIP1Q5VSL9 837 aa16.94■□□□□ 0.3
NUDCD3-201ENST00000338427 KIAA0825Q8IV33 1275 aa16.94■□□□□ 0.3
NUDCD3-201ENST00000338427 C2orf69Q8N8R5 385 aa16.94■□□□□ 0.3
NUDCD3-201ENST00000338427 PCDHAC2Q9Y5I4 1007 aa16.94■□□□□ 0.3
NUDCD3-201ENST00000338427 FAM155AB1AL88 458 aaPredicted RBP16.93■□□□□ 0.3
NUDCD3-201ENST00000338427 SASH1O94885 1247 aa16.93■□□□□ 0.3
NUDCD3-201ENST00000338427 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
NUDCD3-201ENST00000338427 RGMBQ6NW40 437 aa16.93■□□□□ 0.3
NUDCD3-201ENST00000338427 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
NUDCD3-201ENST00000338427 CERS5Q8N5B7 392 aa16.93■□□□□ 0.3
NUDCD3-201ENST00000338427 HHIPL1Q96JK4 782 aa16.93■□□□□ 0.3
NUDCD3-201ENST00000338427 E9PSI1 815 aa16.92■□□□□ 0.3
NUDCD3-201ENST00000338427 WNT10BO00744 389 aa16.92■□□□□ 0.3
NUDCD3-201ENST00000338427 TAF7LQ5H9L4 462 aa16.92■□□□□ 0.3
NUDCD3-201ENST00000338427 CNNM1Q9NRU3 951 aa16.92■□□□□ 0.3
NUDCD3-201ENST00000338427 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
NUDCD3-201ENST00000338427 UBE2Q2LH0YL09 131 aa16.91■□□□□ 0.3
NUDCD3-201ENST00000338427 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
NUDCD3-201ENST00000338427 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
NUDCD3-201ENST00000338427 BEGAINQ9BUH8 593 aa16.91■□□□□ 0.3
NUDCD3-201ENST00000338427 OGFOD1Q8N543 542 aa16.9■□□□□ 0.3
NUDCD3-201ENST00000338427 KLHDC4Q8TBB5 520 aa16.9■□□□□ 0.3
NUDCD3-201ENST00000338427 BICC1Q9H694 974 aaKnown RBP16.9■□□□□ 0.3
NUDCD3-201ENST00000338427 PSME4Q14997 1843 aa16.9■□□□□ 0.3
NUDCD3-201ENST00000338427 LRRC24Q50LG9 513 aa16.89■□□□□ 0.29
NUDCD3-201ENST00000338427 C15orf52Q6ZUT6 534 aaKnown RBP16.89■□□□□ 0.29
NUDCD3-201ENST00000338427 TRMT2AQ8IZ69 625 aaKnown RBP16.89■□□□□ 0.29
NUDCD3-201ENST00000338427 ANKRD44Q8N8A2 993 aa16.89■□□□□ 0.29
NUDCD3-201ENST00000338427 USP44Q9H0E7 712 aa16.89■□□□□ 0.29
NUDCD3-201ENST00000338427 FZD1Q9UP38 647 aa16.89■□□□□ 0.29
NUDCD3-201ENST00000338427 AOX1Q06278 1338 aa16.89■□□□□ 0.29
NUDCD3-201ENST00000338427 ZNF609O15014 1411 aa16.88■□□□□ 0.29
NUDCD3-201ENST00000338427 IL1R1P14778 569 aa16.88■□□□□ 0.29
NUDCD3-201ENST00000338427 GYG1P46976 350 aa16.88■□□□□ 0.29
NUDCD3-201ENST00000338427 PRKG1Q13976 671 aa16.88■□□□□ 0.29
NUDCD3-201ENST00000338427 ZBED3Q96IU2 234 aaPredicted RBP16.88■□□□□ 0.29
NUDCD3-201ENST00000338427 RIPOR2Q9Y4F9 1068 aa16.88■□□□□ 0.29
NUDCD3-201ENST00000338427 ZNF646O15015 1829 aaPredicted RBP16.88■□□□□ 0.29
NUDCD3-201ENST00000338427 UTYO14607 1347 aa16.88■□□□□ 0.29
NUDCD3-201ENST00000338427 BRPF1P55201 1214 aaPredicted RBP16.87■□□□□ 0.29
NUDCD3-201ENST00000338427 NOGQ13253 232 aa16.87■□□□□ 0.29
NUDCD3-201ENST00000338427 CSRNP1Q96S65 589 aa16.87■□□□□ 0.29
NUDCD3-201ENST00000338427 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.87■□□□□ 0.29
NUDCD3-201ENST00000338427 CCDC102AQ96A19 550 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms