RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 CCDC85AQ96PX6 553 aaPredicted RBP11.35□□□□□ -0.59
BEST3-203ENST00000331471 TMEM106CQ9BVX2 250 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 ZC3H12CQ9C0D7 883 aaKnown RBP11.35□□□□□ -0.59
BEST3-203ENST00000331471 CWC25Q9NXE8 425 aaPredicted RBP11.35□□□□□ -0.59
BEST3-203ENST00000331471 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 PGAP2Q9UHJ9 254 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 AOC2O75106 756 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 UFL1O94874 794 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 NBR1Q14596 966 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
BEST3-203ENST00000331471 ERICH6BQ5W0A0 696 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 SAPCD2Q86UD0 394 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 USP48Q86UV5 1035 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 DPF2Q92785 391 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 JARID2Q92833 1246 aaPredicted RBP11.35□□□□□ -0.59
BEST3-203ENST00000331471 SEC31BQ9NQW1 1179 aa11.35□□□□□ -0.59
BEST3-203ENST00000331471 PDE8AO60658 829 aa11.34□□□□□ -0.59
BEST3-203ENST00000331471 PCCAP05165 728 aaPredicted RBP11.34□□□□□ -0.59
BEST3-203ENST00000331471 RPS12P25398 132 aaKnown RBP11.34□□□□□ -0.59
BEST3-203ENST00000331471 MAP2K2P36507 400 aa11.34□□□□□ -0.59
BEST3-203ENST00000331471 TBC1D10BQ4KMP7 808 aaPredicted RBP11.34□□□□□ -0.59
BEST3-203ENST00000331471 TPRNQ4KMQ1 711 aa11.34□□□□□ -0.59
BEST3-203ENST00000331471 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
BEST3-203ENST00000331471 GGA1Q9UJY5 639 aa11.34□□□□□ -0.59
BEST3-203ENST00000331471 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
BEST3-203ENST00000331471 STK31Q9BXU1 1019 aa11.33□□□□□ -0.6
BEST3-203ENST00000331471 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
BEST3-203ENST00000331471 PODXL2Q9NZ53 605 aa11.33□□□□□ -0.6
BEST3-203ENST00000331471 MAP3K2Q9Y2U5 619 aa11.33□□□□□ -0.6
BEST3-203ENST00000331471 RTL9Q8NET4 1388 aa11.33□□□□□ -0.6
BEST3-203ENST00000331471 NEXNQ0ZGT2 675 aa11.32□□□□□ -0.6
BEST3-203ENST00000331471 KRT26Q7Z3Y9 468 aa11.32□□□□□ -0.6
BEST3-203ENST00000331471 TSR2Q969E8 191 aaKnown RBP11.32□□□□□ -0.6
BEST3-203ENST00000331471 DCPSQ96C86 337 aaKnown RBP11.32□□□□□ -0.6
BEST3-203ENST00000331471 HHIPL1Q96JK4 782 aa11.32□□□□□ -0.6
BEST3-203ENST00000331471 HUNKP57058 714 aa11.31□□□□□ -0.6
BEST3-203ENST00000331471 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.6
BEST3-203ENST00000331471 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
BEST3-203ENST00000331471 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
BEST3-203ENST00000331471 TSPYL6Q8N831 410 aa11.31□□□□□ -0.6
BEST3-203ENST00000331471 TSKSQ9UJT2 592 aa11.31□□□□□ -0.6
BEST3-203ENST00000331471 XDHP47989 1333 aa11.31□□□□□ -0.6
BEST3-203ENST00000331471 ZBED9Q6R2W3 1325 aa11.31□□□□□ -0.6
BEST3-203ENST00000331471 PI4KAP2A4QPH2 592 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 ADM5C9JUS6 153 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 EGFRP00533 1210 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 VIL1P09327 827 aaKnown RBP11.3□□□□□ -0.6
BEST3-203ENST00000331471 BRPF1P55201 1214 aaPredicted RBP11.3□□□□□ -0.6
BEST3-203ENST00000331471 CTSWP56202 376 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 DLK2Q6UY11 383 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 PI4KAP1Q8N8J0 262 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 CDC5LQ99459 802 aaKnown RBP11.3□□□□□ -0.6
BEST3-203ENST00000331471 CA12O43570 354 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 ATP2B4P23634 1241 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 EVX2Q03828 476 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 TWISTNBQ3B726 338 aaPredicted RBP11.3□□□□□ -0.6
BEST3-203ENST00000331471 RSBN1LQ6PCB5 846 aaPredicted RBP11.3□□□□□ -0.6
BEST3-203ENST00000331471 SULF1Q8IWU6 871 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 C2orf69Q8N8R5 385 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 ABHD8Q96I13 439 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 MS4A4AQ96JQ5 239 aa11.3□□□□□ -0.6
BEST3-203ENST00000331471 GBA2Q9HCG7 927 aaPredicted RBP11.3□□□□□ -0.6
BEST3-203ENST00000331471 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
BEST3-203ENST00000331471 NOGQ13253 232 aa11.29□□□□□ -0.6
BEST3-203ENST00000331471 CCDC27Q2M243 656 aa11.29□□□□□ -0.6
BEST3-203ENST00000331471 CCDC184Q52MB2 194 aa11.29□□□□□ -0.6
BEST3-203ENST00000331471 GGA3Q9NZ52 723 aa11.29□□□□□ -0.6
BEST3-203ENST00000331471 SPEF2Q9C093 1822 aa11.28□□□□□ -0.6
BEST3-203ENST00000331471 SCN9AQ15858 1988 aa11.28□□□□□ -0.6
BEST3-203ENST00000331471 CWF19L2Q2TBE0 894 aaKnown RBP11.28□□□□□ -0.6
BEST3-203ENST00000331471 RGMBQ6NW40 437 aa11.28□□□□□ -0.6
BEST3-203ENST00000331471 WWC1Q8IX03 1113 aa11.28□□□□□ -0.6
BEST3-203ENST00000331471 AGBL3Q8NEM8 1001 aa11.28□□□□□ -0.6
BEST3-203ENST00000331471 FBXW7Q969H0 707 aa11.28□□□□□ -0.6
BEST3-203ENST00000331471 GREM2Q9H772 168 aa11.28□□□□□ -0.6
BEST3-203ENST00000331471 MRS2Q9HD23 443 aa11.28□□□□□ -0.6
BEST3-203ENST00000331471 USP17L3A6NCW0 530 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 USP17L4A6NCW7 530 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 CCDC85CA6NKD9 419 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 NEURL1BA8MQ27 555 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 HAX1O00165 279 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 IGHMBP2P38935 993 aaKnown RBP11.27□□□□□ -0.61
BEST3-203ENST00000331471 SCARF1Q14162 830 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 G2E3Q7L622 706 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 USP17L1Q7RTZ2 530 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 PODNQ7Z5L7 613 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 TTLL11Q8NHH1 800 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 WDR70Q9NW82 654 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 MYH3P11055 1940 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 ZNF609O15014 1411 aa11.27□□□□□ -0.61
BEST3-203ENST00000331471 MED23Q9ULK4 1368 aa11.26□□□□□ -0.61
BEST3-203ENST00000331471 ASTN2O75129 1339 aaPredicted RBP11.26□□□□□ -0.61
BEST3-203ENST00000331471 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
BEST3-203ENST00000331471 USP17L8P0C7I0 530 aa11.26□□□□□ -0.61
BEST3-203ENST00000331471 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
BEST3-203ENST00000331471 ZNF280AP59817 542 aaPredicted RBP11.26□□□□□ -0.61
BEST3-203ENST00000331471 ANGEL2Q5VTE6 544 aaKnown RBP11.26□□□□□ -0.61
BEST3-203ENST00000331471 UBE3BQ7Z3V4 1068 aa11.26□□□□□ -0.61
BEST3-203ENST00000331471 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms