RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RIPOR2Q9Y4F9 1068 aa17.23■□□□□ 0.35
TPM3-206ENST00000330188 ABCC12Q96J65 1359 aa17.23■□□□□ 0.35
TPM3-206ENST00000330188 KAT6BQ8WYB5 2073 aa17.22■□□□□ 0.35
TPM3-206ENST00000330188 COL22A1Q8NFW1 1626 aaPredicted RBP17.22■□□□□ 0.35
TPM3-206ENST00000330188 TTLL11Q8NHH1 800 aa17.22■□□□□ 0.35
TPM3-206ENST00000330188 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
TPM3-206ENST00000330188 GREM2Q9H772 168 aa17.22■□□□□ 0.35
TPM3-206ENST00000330188 AKAP11Q9UKA4 1901 aa17.22■□□□□ 0.35
TPM3-206ENST00000330188 MYH15Q9Y2K3 1946 aa17.22■□□□□ 0.35
TPM3-206ENST00000330188 ZFYP08048 801 aaPredicted RBP17.21■□□□□ 0.35
TPM3-206ENST00000330188 ITGA6P23229 1130 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 ZAP70P43403 619 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 CTSWP56202 376 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 APOBRQ0VD83 1088 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 RESTQ13127 1097 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
TPM3-206ENST00000330188 DOT1LQ8TEK3 1739 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 ROBO1Q9Y6N7 1651 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 FOXP2O15409 715 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 HCLS1P14317 486 aaPredicted RBP17.21■□□□□ 0.35
TPM3-206ENST00000330188 TTLL5Q6EMB2 1281 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
TPM3-206ENST00000330188 DDX11Q96FC9 970 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
TPM3-206ENST00000330188 EXOC5O00471 708 aa17.2■□□□□ 0.34
TPM3-206ENST00000330188 ATP2B3Q16720 1220 aa17.2■□□□□ 0.34
TPM3-206ENST00000330188 METTL24Q5JXM2 366 aa17.2■□□□□ 0.34
TPM3-206ENST00000330188 SPATA32Q96LK8 384 aa17.2■□□□□ 0.34
TPM3-206ENST00000330188 CTDNEP1O95476 244 aa17.2■□□□□ 0.34
TPM3-206ENST00000330188 LDHAL6AQ6ZMR3 332 aa17.2■□□□□ 0.34
TPM3-206ENST00000330188 LEO1Q8WVC0 666 aaPredicted RBP17.2■□□□□ 0.34
TPM3-206ENST00000330188 NAP1L5Q96NT1 182 aaPredicted RBP17.2■□□□□ 0.34
TPM3-206ENST00000330188 TFIP11Q9UBB9 837 aaKnown RBP17.2■□□□□ 0.34
TPM3-206ENST00000330188 ANKRD18BA2A2Z9 1011 aa17.19■□□□□ 0.34
TPM3-206ENST00000330188 IRS4O14654 1257 aaPredicted RBP17.19■□□□□ 0.34
TPM3-206ENST00000330188 LIG1P18858 919 aa17.19■□□□□ 0.34
TPM3-206ENST00000330188 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
TPM3-206ENST00000330188 PI16Q6UXB8 463 aa17.19■□□□□ 0.34
TPM3-206ENST00000330188 APPBP2Q92624 585 aa17.19■□□□□ 0.34
TPM3-206ENST00000330188 ZKSCAN5Q9Y2L8 839 aa17.19■□□□□ 0.34
TPM3-206ENST00000330188 AHDC1Q5TGY3 1603 aaPredicted RBP17.19■□□□□ 0.34
TPM3-206ENST00000330188 H3BQV1 296 aa17.18■□□□□ 0.34
TPM3-206ENST00000330188 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
TPM3-206ENST00000330188 VGLL2Q8N8G2 317 aa17.18■□□□□ 0.34
TPM3-206ENST00000330188 SYTL4Q96C24 671 aaPredicted RBP17.18■□□□□ 0.34
TPM3-206ENST00000330188 ERVV-1B6SEH8 477 aa17.18■□□□□ 0.34
TPM3-206ENST00000330188 MCAMP43121 646 aa17.18■□□□□ 0.34
TPM3-206ENST00000330188 ZSCAN16Q9H4T2 348 aaPredicted RBP17.18■□□□□ 0.34
TPM3-206ENST00000330188 TRMT112Q9UI30 125 aaKnown RBP17.18■□□□□ 0.34
TPM3-206ENST00000330188 CTNNA3Q9UI47 895 aa17.18■□□□□ 0.34
TPM3-206ENST00000330188 DDX60Q8IY21 1712 aaKnown RBP17.18■□□□□ 0.34
TPM3-206ENST00000330188 LRP5O75197 1615 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 PTPDC1A2A3K4 754 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 ZNF500O60304 480 aaPredicted RBP17.17■□□□□ 0.34
TPM3-206ENST00000330188 IL6STP40189 918 aaPredicted RBP17.17■□□□□ 0.34
TPM3-206ENST00000330188 CCT2P78371 535 aaKnown RBP17.17■□□□□ 0.34
TPM3-206ENST00000330188 HMGN5P82970 282 aaKnown RBP17.17■□□□□ 0.34
TPM3-206ENST00000330188 CHST3Q7LGC8 479 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 DZIP3Q86Y13 1208 aaKnown RBP17.17■□□□□ 0.34
TPM3-206ENST00000330188 FBXL16Q8N461 479 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 ZNF274Q96GC6 653 aaPredicted RBP17.17■□□□□ 0.34
TPM3-206ENST00000330188 PUS7LQ9H0K6 701 aaKnown RBP17.17■□□□□ 0.34
TPM3-206ENST00000330188 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 SLIT2O94813 1529 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 UBN2Q6ZU65 1347 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 SALL1Q9NSC2 1324 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 PDE8AO60658 829 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 PDIA3P30101 505 aaKnown RBP17.17■□□□□ 0.34
TPM3-206ENST00000330188 MCM5P33992 734 aa17.17■□□□□ 0.34
TPM3-206ENST00000330188 MYO5AQ9Y4I1 1855 aaKnown RBP17.16■□□□□ 0.34
TPM3-206ENST00000330188 FGAP02671 866 aa17.16■□□□□ 0.34
TPM3-206ENST00000330188 IMMTQ16891 758 aaKnown RBP17.16■□□□□ 0.34
TPM3-206ENST00000330188 NAA16Q6N069 864 aaPredicted RBP17.16■□□□□ 0.34
TPM3-206ENST00000330188 ZNF512BQ96KM6 892 aaPredicted RBP17.16■□□□□ 0.34
TPM3-206ENST00000330188 NUP62CLQ9H1M0 184 aa17.16■□□□□ 0.34
TPM3-206ENST00000330188 NCOA5Q9HCD5 579 aaKnown RBP17.16■□□□□ 0.34
TPM3-206ENST00000330188 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
TPM3-206ENST00000330188 ZNF34Q8IZ26 560 aa17.15■□□□□ 0.34
TPM3-206ENST00000330188 PGBD1Q96JS3 809 aa17.15■□□□□ 0.34
TPM3-206ENST00000330188 ARAP2Q8WZ64 1704 aa17.15■□□□□ 0.34
TPM3-206ENST00000330188 GOLGA6L4A6NEF3 574 aa17.15■□□□□ 0.34
TPM3-206ENST00000330188 GPAA1O43292 621 aa17.15■□□□□ 0.34
TPM3-206ENST00000330188 EVCP57679 992 aa17.15■□□□□ 0.34
TPM3-206ENST00000330188 HAND2P61296 217 aa17.15■□□□□ 0.34
TPM3-206ENST00000330188 PDE8BO95263 885 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 CCDC192P0DO97 292 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 MAP3K11Q16584 847 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 KIF3AQ9Y496 699 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 ATRNO75882 1429 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 KDM4AO75164 1064 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 OFD1O75665 1012 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 ADCY5O95622 1261 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 ADD2P35612 726 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 NRAPQ86VF7 1730 aa17.14■□□□□ 0.33
TPM3-206ENST00000330188 MB21D2Q8IYB1 491 aaPredicted RBP17.14■□□□□ 0.33
TPM3-206ENST00000330188 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.14■□□□□ 0.33
TPM3-206ENST00000330188 GPHNQ9NQX3 736 aaPredicted RBP17.14■□□□□ 0.33
TPM3-206ENST00000330188 DDX19AQ9NUU7 478 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms