RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 NBPF10Q6P3W6 841 aaKnown RBP18.71■□□□□ 0.59
SYNM-201ENST00000328642 NBPF15Q8N660 670 aa18.71■□□□□ 0.59
SYNM-201ENST00000328642 RPS6KB1P23443 525 aa18.71■□□□□ 0.59
SYNM-201ENST00000328642 LSG1Q9H089 658 aaKnown RBP18.71■□□□□ 0.59
SYNM-201ENST00000328642 TMEM63CQ9P1W3 806 aa18.71■□□□□ 0.59
SYNM-201ENST00000328642 STAP2Q9UGK3 403 aa18.71■□□□□ 0.59
SYNM-201ENST00000328642 CMTR1Q8N1G2 835 aaKnown RBP18.71■□□□□ 0.59
SYNM-201ENST00000328642 LMBRD1Q9NUN5 540 aa18.71■□□□□ 0.59
SYNM-201ENST00000328642 CDC42BPGQ6DT37 1551 aa18.71■□□□□ 0.59
SYNM-201ENST00000328642 KIF24Q5T7B8 1368 aa18.71■□□□□ 0.58
SYNM-201ENST00000328642 SLC3A2P08195 630 aaKnown RBP18.7■□□□□ 0.58
SYNM-201ENST00000328642 CCAR1Q8IX12 1150 aaKnown RBP18.7■□□□□ 0.58
SYNM-201ENST00000328642 MYO5BQ9ULV0 1848 aa18.7■□□□□ 0.58
SYNM-201ENST00000328642 RIMBP2O15034 1052 aa18.7■□□□□ 0.58
SYNM-201ENST00000328642 BRMS1Q9HCU9 246 aa18.7■□□□□ 0.58
SYNM-201ENST00000328642 ADCY9O60503 1353 aa18.7■□□□□ 0.58
SYNM-201ENST00000328642 MPHOSPH10O00566 681 aaKnown RBP18.7■□□□□ 0.58
SYNM-201ENST00000328642 ATP5JP18859 108 aa18.7■□□□□ 0.58
SYNM-201ENST00000328642 BCAMP50895 628 aa18.7■□□□□ 0.58
SYNM-201ENST00000328642 KIF2CQ99661 725 aa18.7■□□□□ 0.58
SYNM-201ENST00000328642 OSBPL3Q9H4L5 887 aa18.7■□□□□ 0.58
SYNM-201ENST00000328642 ADCY5O95622 1261 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 CTDSPL2Q05D32 466 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 HSP90AA2PQ14568 343 aaPredicted RBP18.69■□□□□ 0.58
SYNM-201ENST00000328642 CCDC87Q9NVE4 849 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 TSPY2A6NKD2 308 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 PHKA1P46020 1223 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 GYG1P46976 350 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 HMGN5P82970 282 aaKnown RBP18.69■□□□□ 0.58
SYNM-201ENST00000328642 ZNF622Q969S3 477 aaKnown RBP eCLIP18.69■□□□□ 0.58
SYNM-201ENST00000328642 ALG1Q9BT22 464 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 GPHNQ9NQX3 736 aaPredicted RBP18.69■□□□□ 0.58
SYNM-201ENST00000328642 MED14O60244 1454 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 LETM1O95202 739 aaPredicted RBP18.69■□□□□ 0.58
SYNM-201ENST00000328642 SERPINC1P01008 464 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 OLFM4Q6UX06 510 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 PHKBQ93100 1093 aa18.69■□□□□ 0.58
SYNM-201ENST00000328642 TTC12Q9H892 705 aaPredicted RBP18.69■□□□□ 0.58
SYNM-201ENST00000328642 CCNL1Q9UK58 526 aaPredicted RBP18.69■□□□□ 0.58
SYNM-201ENST00000328642 RTCBQ9Y3I0 505 aaKnown RBP18.69■□□□□ 0.58
SYNM-201ENST00000328642 ZBTB43O43298 467 aa18.68■□□□□ 0.58
SYNM-201ENST00000328642 TTF1Q15361 905 aaPredicted RBP18.68■□□□□ 0.58
SYNM-201ENST00000328642 NAA16Q6N069 864 aaPredicted RBP18.68■□□□□ 0.58
SYNM-201ENST00000328642 CEP170BQ9Y4F5 1589 aaPredicted RBP18.68■□□□□ 0.58
SYNM-201ENST00000328642 PDE8AO60658 829 aa18.68■□□□□ 0.58
SYNM-201ENST00000328642 LRSAM1Q6UWE0 723 aa18.68■□□□□ 0.58
SYNM-201ENST00000328642 POLA2Q14181 598 aa18.68■□□□□ 0.58
SYNM-201ENST00000328642 COPRSQ9NQ92 184 aa18.68■□□□□ 0.58
SYNM-201ENST00000328642 LOC102724428A0A0B4J2F2 783 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 KCNQ2O43526 872 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 CDKL5O76039 1030 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 ZNF165P49910 485 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 SIK1P57059 783 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 IQCA1Q86XH1 822 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 UQCRFS1P1P0C7P4 283 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 ZNF532Q9HCE3 1301 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 DNAJC25Q9H1X3 360 aa18.67■□□□□ 0.58
SYNM-201ENST00000328642 ZSCAN30Q86W11 494 aa18.66■□□□□ 0.58
SYNM-201ENST00000328642 INTS4Q96HW7 963 aaKnown RBP18.66■□□□□ 0.58
SYNM-201ENST00000328642 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.66■□□□□ 0.58
SYNM-201ENST00000328642 ANKARQ7Z5J8 1434 aa18.66■□□□□ 0.58
SYNM-201ENST00000328642 NAT10Q9H0A0 1025 aaKnown RBP18.66■□□□□ 0.58
SYNM-201ENST00000328642 KIAA1210Q9ULL0 1709 aa18.66■□□□□ 0.58
SYNM-201ENST00000328642 AGLP35573 1532 aa18.66■□□□□ 0.58
SYNM-201ENST00000328642 ZFYP08048 801 aaPredicted RBP18.66■□□□□ 0.58
SYNM-201ENST00000328642 CYP21A2P08686 494 aa18.66■□□□□ 0.58
SYNM-201ENST00000328642 JMYQ8N9B5 988 aa18.66■□□□□ 0.58
SYNM-201ENST00000328642 ARHGEF28Q8N1W1 1705 aaKnown RBP18.66■□□□□ 0.58
SYNM-201ENST00000328642 WTAPQ15007 396 aa18.66■□□□□ 0.58
SYNM-201ENST00000328642 TRMT1LQ7Z2T5 733 aaKnown RBP18.66■□□□□ 0.58
SYNM-201ENST00000328642 CRKLP46109 303 aaKnown RBP18.65■□□□□ 0.58
SYNM-201ENST00000328642 SSRP1Q08945 709 aaKnown RBP18.65■□□□□ 0.58
SYNM-201ENST00000328642 PICALMQ13492 652 aa18.65■□□□□ 0.58
SYNM-201ENST00000328642 TPTE2Q6XPS3 522 aa18.65■□□□□ 0.58
SYNM-201ENST00000328642 SIGLEC1Q9BZZ2 1709 aa18.65■□□□□ 0.58
SYNM-201ENST00000328642 A0A087WWV3 80 aa18.65■□□□□ 0.58
SYNM-201ENST00000328642 A0A1B0GVL5 298 aa18.65■□□□□ 0.58
SYNM-201ENST00000328642 SSBP05455 408 aaKnown RBP eCLIP18.65■□□□□ 0.58
SYNM-201ENST00000328642 HSPD1P10809 573 aaKnown RBP18.65■□□□□ 0.58
SYNM-201ENST00000328642 CTSWP56202 376 aa18.65■□□□□ 0.58
SYNM-201ENST00000328642 ANO6Q4KMQ2 910 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 SPECC1Q5M775 1068 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 SDR42E1Q8WUS8 393 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 ZHX3Q9H4I2 956 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 HEG1Q9ULI3 1381 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 E7EWF7 191 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.64■□□□□ 0.57
SYNM-201ENST00000328642 ZNF444Q8N0Y2 327 aaPredicted RBP18.64■□□□□ 0.57
SYNM-201ENST00000328642 CTCFLQ8NI51 663 aaPredicted RBP18.64■□□□□ 0.57
SYNM-201ENST00000328642 DNAJC5Q9H3Z4 198 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 HOOK1Q9UJC3 728 aaKnown RBP18.64■□□□□ 0.57
SYNM-201ENST00000328642 C1orf167Q5SNV9 1468 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 BRD1O95696 1058 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 GIGYF2Q6Y7W6 1299 aaKnown RBP18.64■□□□□ 0.57
SYNM-201ENST00000328642 ZBTB38Q8NAP3 1195 aaPredicted RBP18.64■□□□□ 0.57
SYNM-201ENST00000328642 GPT2Q8TD30 523 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 TRMT1Q9NXH9 659 aaKnown RBP18.64■□□□□ 0.57
SYNM-201ENST00000328642 USP21Q9UK80 565 aa18.64■□□□□ 0.57
SYNM-201ENST00000328642 FGAP02671 866 aa18.63■□□□□ 0.57
SYNM-201ENST00000328642 SMARCC1Q92922 1105 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms