RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 RNMTO43148 476 aaKnown RBP12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 LIG1P18858 919 aa12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 HLTFQ14527 1009 aaKnown RBP eCLIP12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 HS1BP3Q53T59 392 aa12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 RNF187Q5TA31 235 aaPredicted RBP12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 CADPS2Q86UW7 1296 aa12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 PTPDC1A2A3K4 754 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 NBPF6Q5VWK0 638 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 NBPF5PQ86XG9 351 aaPredicted RBP12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 NBPF4Q96M43 638 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 CABP5Q9NP86 173 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 INCENPQ9NQS7 918 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 INSRP06213 1382 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 CALM1P0DP23 149 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 CALM2P0DP24 149 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 CALM3P0DP25 149 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 RFC4P35249 363 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 ATP6V1AP38606 617 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 SYCP3Q8IZU3 236 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 ATP7AQ04656 1500 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 GSTTP1A0A1W2PQM5 241 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 HSF2BPO75031 334 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 CYLC1P35663 651 aaPredicted RBP12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 NOP2P46087 812 aaKnown RBP12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 MAATS1Q7Z4T9 603 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 EYA1Q99502 592 aa12.46□□□□□ -0.42
SNRNP200-201ENST00000323853 ABCC2Q92887 1545 aa12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 TBCAO75347 108 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 EDC4Q6P2E9 1401 aaKnown RBP12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 TUBB4AP04350 444 aa12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 ERMNQ8TAM6 284 aa12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 ZSWIM4Q9H7M6 989 aa12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 SPAG1Q07617 926 aa12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 DHX58Q96C10 678 aa12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 AOX1Q06278 1338 aa12.45□□□□□ -0.42
SNRNP200-201ENST00000323853 SMC1AQ14683 1233 aaKnown RBP12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 BRAPQ7Z569 592 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 HSP90AA4PQ58FG1 418 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 CHST3Q7LGC8 479 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 CTAGE15A4D2H0 777 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 CTAGE8P0CG41 777 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 CTAGE6Q86UF2 777 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 CTAGE4Q8IX94 777 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 SAMD9Q5K651 1589 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 LMAN1P49257 510 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 GNAQP50148 359 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 PRPF4BQ13523 1007 aaKnown RBP12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 DHX32Q7L7V1 743 aaKnown RBP12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 KRT222Q8N1A0 295 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 MAGEB6Q8N7X4 407 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 NFATC2IPQ8NCF5 419 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 GIMAP7Q8NHV1 300 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 FERMT2Q96AC1 680 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 IL13P35225 146 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 TBC1D5Q92609 795 aa12.44□□□□□ -0.42
SNRNP200-201ENST00000323853 NPHP3Q7Z494 1330 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 RPS6KB1P23443 525 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 CEP112Q8N8E3 955 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 MYO1BO43795 1136 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 CCDC172P0C7W6 258 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 NGLY1Q96IV0 654 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 DISP1Q96F81 1524 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 NAPAP54920 295 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 ZNF804AQ7Z570 1209 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 MMRN2Q9H8L6 949 aa12.43□□□□□ -0.42
SNRNP200-201ENST00000323853 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 PTGS1P23219 599 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 SRRTQ9BXP5 876 aaKnown RBP12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 TTC12Q9H892 705 aaPredicted RBP12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 STX8Q9UNK0 236 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 IQSEC3Q9UPP2 1182 aaPredicted RBP12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 CCDC175P0C221 793 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 TRIM75PA6NK02 468 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 SETDB2Q96T68 719 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 AKR1B10O60218 316 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 DZIP3Q86Y13 1208 aaKnown RBP12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 CTAGE9A4FU28 777 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 PSMA7O14818 248 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 CTNNA2P26232 953 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 ATL3Q6DD88 541 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 G2E3Q7L622 706 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 BABAM1Q9NWV8 329 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 SBNO1A3KN83 1393 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 SLU7O95391 586 aaKnown RBP12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 IL2RBP14784 551 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 ACSBG1Q96GR2 724 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 PCDH11XQ9BZA7 1347 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 PCDH11YQ9BZA8 1340 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 TRIM35Q9UPQ4 493 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 NIP7Q9Y221 180 aaKnown RBP eCLIP12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 SAMM50Q9Y512 469 aa12.42□□□□□ -0.42
SNRNP200-201ENST00000323853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.42□□□□□ -0.425e-6■□□□□ 8.1
SNRNP200-201ENST00000323853 SLC27A2O14975 620 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 ASIC1P78348 528 aa12.41□□□□□ -0.42
SNRNP200-201ENST00000323853 GOLGA1Q92805 767 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms