RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 MAP3K14Q99558 947 aa9.48□□□□□ -0.89
CNOT4-201ENST00000315544 USP25Q9UHP3 1055 aa9.48□□□□□ -0.89
CNOT4-201ENST00000315544 GRM8O00222 908 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 CIAO1O76071 339 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 KCNA3P22001 575 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 TOM1L2Q6ZVM7 507 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 CNPY2Q9Y2B0 182 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 FGRP09769 529 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 ZSCAN20P17040 1043 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-201ENST00000315544 NASPP49321 788 aaPredicted RBP9.47□□□□□ -0.89
CNOT4-201ENST00000315544 NUTM1Q86Y26 1132 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 SPRYD3Q8NCJ5 442 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 PA2G4Q9UQ80 394 aaKnown RBP9.47□□□□□ -0.89
CNOT4-201ENST00000315544 MAP3K2Q9Y2U5 619 aa9.47□□□□□ -0.89
CNOT4-201ENST00000315544 NPY5RQ15761 445 aa9.46□□□□□ -0.89
CNOT4-201ENST00000315544 AXDND1Q5T1B0 1012 aaPredicted RBP9.46□□□□□ -0.89
CNOT4-201ENST00000315544 ERICH6Q7L0X2 663 aa9.46□□□□□ -0.89
CNOT4-201ENST00000315544 ELOA2Q8IYF1 753 aaPredicted RBP9.46□□□□□ -0.89
CNOT4-201ENST00000315544 MYH4Q9Y623 1939 aa9.46□□□□□ -0.9
CNOT4-201ENST00000315544 SSC5DA1L4H1 1573 aa9.46□□□□□ -0.9
CNOT4-201ENST00000315544 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.9
CNOT4-201ENST00000315544 ZMYM1Q5SVZ6 1142 aa9.46□□□□□ -0.9
CNOT4-201ENST00000315544 ZNF384Q8TF68 577 aa9.46□□□□□ -0.9
CNOT4-201ENST00000315544 SMARCC1Q92922 1105 aaPredicted RBP9.46□□□□□ -0.9
CNOT4-201ENST00000315544 GBP4Q96PP9 640 aa9.46□□□□□ -0.9
CNOT4-201ENST00000315544 BPIFA3Q9BQP9 254 aa9.46□□□□□ -0.9
CNOT4-201ENST00000315544 LIMCH1Q9UPQ0 1083 aa9.46□□□□□ -0.9
CNOT4-201ENST00000315544 SH2B2O14492 632 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 KDM4AO75164 1064 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 UBE2HP62256 183 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 NMIQ13287 307 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 NT5DC1Q5TFE4 455 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 MCTP1Q6DN14 999 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 NSUN7Q8NE18 718 aaKnown RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 MYRIPQ8NFW9 859 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 EVI5LQ96CN4 794 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 ZNF496Q96IT1 587 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 RCOR1Q9UKL0 485 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 LCTP09848 1927 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 PFKFB2O60825 505 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 LIG1P18858 919 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 EIF5P55010 431 aaKnown RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 CCZ1BP86790 482 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 CCZ1P86791 482 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 SCRN1Q12765 414 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 MB21D2Q8IYB1 491 aaPredicted RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 SYCE3A1L190 88 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 RRP9O43818 475 aaKnown RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 BMP6P22004 513 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 CANXP27824 592 aaKnown RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 HMGN5P82970 282 aaKnown RBP9.45□□□□□ -0.9
CNOT4-201ENST00000315544 PTPAQ15257 358 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 ECHDC1Q9NTX5 307 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 A0A0G2JMZ2 1700 aa9.45□□□□□ -0.9
CNOT4-201ENST00000315544 STX6O43752 255 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 INTS13Q9NVM9 706 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 PYCARDQ9ULZ3 195 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 ARID2Q68CP9 1835 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 CDHR2Q9BYE9 1310 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 FUT2Q10981 343 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 SYCP1Q15431 976 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 CCDC144BQ3MJ40 725 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 TNNI3KQ59H18 835 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 CCDC144CPQ8IYA2 1237 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 FMR1NBQ8N0W7 255 aaPredicted RBP9.44□□□□□ -0.9
CNOT4-201ENST00000315544 FPGT-TNNI3KV9GXZ4 949 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 LRRC37A2A6NM11 1700 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 PRPF40AO75400 957 aaKnown RBP9.44□□□□□ -0.9
CNOT4-201ENST00000315544 GLRX3O76003 335 aaKnown RBP9.44□□□□□ -0.9
CNOT4-201ENST00000315544 BAG6P46379 1132 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 HDGFL1Q5TGJ6 251 aa9.44□□□□□ -0.9
CNOT4-201ENST00000315544 CAVIN1Q6NZI2 390 aaKnown RBP9.44□□□□□ -0.9
CNOT4-201ENST00000315544 UTRNP46939 3433 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 NEK4P51957 841 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 SLFNL1Q499Z3 407 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 RIPOR2Q9Y4F9 1068 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 LTBP3Q9NS15 1303 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 RLFQ13129 1914 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 ANXA1P04083 346 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 ARID5BQ14865 1188 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 TRIM37O94972 964 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 KCNJ6P48051 423 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 TNFRSF25Q93038 417 aa9.43□□□□□ -0.9
CNOT4-201ENST00000315544 UPF2Q9HAU5 1272 aaKnown RBP9.43□□□□□ -0.9
CNOT4-201ENST00000315544 EIF5BO60841 1220 aaKnown RBP9.42□□□□□ -0.9
CNOT4-201ENST00000315544 TBX2Q13207 712 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-201ENST00000315544 PLEKHO1Q53GL0 409 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-201ENST00000315544 MTFR1LQ9H019 292 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 IL1RAPL2Q9NP60 686 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 RBM8AQ9Y5S9 174 aaKnown RBP9.42□□□□□ -0.9
CNOT4-201ENST00000315544 MROH7-TTC4A0A0A0MT08 1334 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 DSCC1Q9BVC3 393 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 RPS6KA4O75676 772 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 MBD3O95983 291 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 NOVP48745 357 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 EN1Q05925 392 aaPredicted RBP9.42□□□□□ -0.9
CNOT4-201ENST00000315544 DEFB132Q7Z7B7 95 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 UPF3BQ9BZI7 483 aaKnown RBP9.42□□□□□ -0.9
CNOT4-201ENST00000315544 ZNF804BA4D1E1 1349 aa9.42□□□□□ -0.9
CNOT4-201ENST00000315544 SARSP49591 514 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms