RNA–Protein interactions for RNA: ENST00000315066.5

CNTD1-201, Transcript of cyclin N-terminal domain containing 1, humanhuman

TSL 1 (best)

Gene CNTD1, Length 2,657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-201ENST00000315066 NPC1L1Q9UHC9 1359 aa5.9□□□□□ -1.46
CNTD1-201ENST00000315066 RELBQ01201 579 aa5.9□□□□□ -1.46
CNTD1-201ENST00000315066 CLN3Q13286 438 aa5.9□□□□□ -1.46
CNTD1-201ENST00000315066 ECM1Q16610 540 aa5.9□□□□□ -1.46
CNTD1-201ENST00000315066 ALKBH2Q6NS38 261 aa5.9□□□□□ -1.46
CNTD1-201ENST00000315066 JARID2Q92833 1246 aaPredicted RBP5.9□□□□□ -1.46
CNTD1-201ENST00000315066 SNX21Q969T3 373 aa5.9□□□□□ -1.46
CNTD1-201ENST00000315066 ITPKCQ96DU7 683 aa5.9□□□□□ -1.46
CNTD1-201ENST00000315066 LMTK3Q96Q04 1460 aa5.9□□□□□ -1.46
CNTD1-201ENST00000315066 DNMT1P26358 1616 aaKnown RBP5.9□□□□□ -1.47
CNTD1-201ENST00000315066 CTIFO43310 598 aaKnown RBP5.9□□□□□ -1.47
CNTD1-201ENST00000315066 PTGIRP43119 386 aa5.9□□□□□ -1.47
CNTD1-201ENST00000315066 WDR4P57081 412 aaKnown RBP5.9□□□□□ -1.47
CNTD1-201ENST00000315066 CENPCQ03188 943 aa5.9□□□□□ -1.47
CNTD1-201ENST00000315066 SYCP1Q15431 976 aa5.9□□□□□ -1.47
CNTD1-201ENST00000315066 COX20Q5RI15 118 aa5.9□□□□□ -1.47
CNTD1-201ENST00000315066 CYP4X1Q8N118 509 aa5.9□□□□□ -1.47
CNTD1-201ENST00000315066 AGBL1Q96MI9 1066 aa5.9□□□□□ -1.47
CNTD1-201ENST00000315066 MYCBPQ99417 103 aaPredicted RBP5.9□□□□□ -1.47
CNTD1-201ENST00000315066 RBSNQ9H1K0 784 aa5.9□□□□□ -1.47
CNTD1-201ENST00000315066 DDX49Q9Y6V7 483 aaKnown RBP5.9□□□□□ -1.47
CNTD1-201ENST00000315066 MLH3Q9UHC1 1453 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 NPR3P17342 541 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 IFFO2Q5TF58 517 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 TMEM214Q6NUQ4 689 aaKnown RBP5.89□□□□□ -1.47
CNTD1-201ENST00000315066 C22orf23Q9BZE7 217 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 DIAPH3Q9NSV4 1193 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 DDX41Q9UJV9 622 aaKnown RBP5.89□□□□□ -1.47
CNTD1-201ENST00000315066 PARD3Q8TEW0 1356 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 KIF3BO15066 747 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 IGHDP01880 384 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 ZSCAN23Q3MJ62 389 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 RGL4Q8IZJ4 473 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 ABTB2Q8N961 1025 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 CHMP4CQ96CF2 233 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 ZSCAN10Q96SZ4 725 aaPredicted RBP5.89□□□□□ -1.47
CNTD1-201ENST00000315066 NCAPGQ9BPX3 1015 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 PRKD2Q9BZL6 878 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 ZNF395Q9H8N7 513 aaPredicted RBP5.89□□□□□ -1.47
CNTD1-201ENST00000315066 SPTLC3Q9NUV7 552 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 HCN4Q9Y3Q4 1203 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 MORC2Q9Y6X9 1032 aaPredicted RBP5.89□□□□□ -1.47
CNTD1-201ENST00000315066 ATP7AQ04656 1500 aa5.89□□□□□ -1.47
CNTD1-201ENST00000315066 CGNL1Q0VF96 1302 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 CAMSAP2Q08AD1 1489 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 LOC102724159A0A0B4J2E5 919 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 MCCP23508 829 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 NOS2P35228 1153 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 NOP2P46087 812 aaKnown RBP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 EIF1AXP47813 144 aaKnown RBP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 LMOD3Q0VAK6 560 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 PWP2Q15269 919 aaKnown RBP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 EAPPQ56P03 285 aaPredicted RBP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 Q6ZVU0 165 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 ZFAND3Q9H8U3 227 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 BRMS1Q9HCU9 246 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 CTNNA3Q9UI47 895 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 USP3Q9Y6I4 520 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 RAD50Q92878 1312 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 MBD5Q9P267 1494 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 USP47Q96K76 1375 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 TNNT3P45378 269 aaPredicted RBP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 MMRN1Q13201 1228 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 NOLC1Q14978 699 aaKnown RBP eCLIP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 TEAD4Q15561 434 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 DUSP27Q5VZP5 1158 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 ZBTB9Q96C00 473 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 NIFKQ9BYG3 293 aaKnown RBP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 QTRT2Q9H974 415 aaKnown RBP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 PKD2L1Q9P0L9 805 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 IQSEC3Q9UPP2 1182 aaPredicted RBP5.88□□□□□ -1.47
CNTD1-201ENST00000315066 PARP3Q9Y6F1 533 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 UHRF1BP1Q6BDS2 1440 aa5.88□□□□□ -1.47
CNTD1-201ENST00000315066 J3QL48 77 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 TSPY4P0CV99 314 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 TSPY10P0CW01 314 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 EGFL6Q8IUX8 553 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 ALDH16A1Q8IZ83 802 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 SMC4Q9NTJ3 1288 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 ADGRL2O95490 1459 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 CFAP65Q6ZU64 1925 aaKnown RBP5.87□□□□□ -1.47
CNTD1-201ENST00000315066 GTF2A1P52655 376 aaPredicted RBP5.87□□□□□ -1.47
CNTD1-201ENST00000315066 CHAF1AQ13111 956 aaPredicted RBP5.87□□□□□ -1.47
CNTD1-201ENST00000315066 SLC27A3Q5K4L6 730 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 RBCK1Q9BYM8 510 aa5.87□□□□□ -1.47
CNTD1-201ENST00000315066 ANKRD30AQ9BXX3 1397 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 A2MP01023 1474 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 TNFRSF10AO00220 468 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 EML1O00423 815 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 RAD51AP2Q09MP3 1159 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 GNASQ5JWF2 1037 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 ICE2Q659A1 982 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 TMC7Q7Z402 723 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 KRT222Q8N1A0 295 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 KDF1Q8NAX2 398 aaPredicted RBP5.86□□□□□ -1.47
CNTD1-201ENST00000315066 MYO19Q96H55 970 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 CITED4Q96RK1 184 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 LRFN2Q9ULH4 789 aa5.86□□□□□ -1.47
CNTD1-201ENST00000315066 CEP83Q9Y592 693 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms