RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 DACT1Q9NYF0 836 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 JAG2Q9Y219 1238 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 CCDC171Q6TFL3 1326 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 IDI1Q13907 227 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 ATP2B3Q16720 1220 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 PROCA1Q8NCQ7 364 aaPredicted RBP23.77■■□□□ 1.4
KDM3B-201ENST00000314358 UAP1Q16222 522 aaPredicted RBP23.77■■□□□ 1.4
KDM3B-201ENST00000314358 HGSO14964 777 aaPredicted RBP23.77■■□□□ 1.4
KDM3B-201ENST00000314358 SH3BP5O60239 455 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 AMOTQ4VCS5 1084 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 CCDC114Q96M63 670 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 SMC6Q96SB8 1091 aa23.77■■□□□ 1.4
KDM3B-201ENST00000314358 CTAGE9A4FU28 777 aa23.76■■□□□ 1.39
KDM3B-201ENST00000314358 CRNKL1Q9BZJ0 848 aaKnown RBP23.76■■□□□ 1.39
KDM3B-201ENST00000314358 SF3A3Q12874 501 aaKnown RBP eCLIP23.76■■□□□ 1.392e-6■■■□□ 18.2
KDM3B-201ENST00000314358 RTN1Q16799 776 aa23.76■■□□□ 1.39
KDM3B-201ENST00000314358 NAPAP54920 295 aa23.76■■□□□ 1.39
KDM3B-201ENST00000314358 NAA25Q14CX7 972 aa23.76■■□□□ 1.39
KDM3B-201ENST00000314358 CCDC121Q6ZUS5 278 aa23.76■■□□□ 1.39
KDM3B-201ENST00000314358 CDC5LQ99459 802 aaKnown RBP23.76■■□□□ 1.39
KDM3B-201ENST00000314358 UBXN1Q04323 297 aa23.75■■□□□ 1.39
KDM3B-201ENST00000314358 RABEP2Q9H5N1 569 aa23.75■■□□□ 1.39
KDM3B-201ENST00000314358 GPIHBP1Q8IV16 184 aa23.75■■□□□ 1.39
KDM3B-201ENST00000314358 RFC4P35249 363 aa23.75■■□□□ 1.39
KDM3B-201ENST00000314358 ZNF569Q5MCW4 686 aa23.75■■□□□ 1.39
KDM3B-201ENST00000314358 CCDC129Q6ZRS4 1044 aa23.75■■□□□ 1.39
KDM3B-201ENST00000314358 CCDC172P0C7W6 258 aa23.74■■□□□ 1.39
KDM3B-201ENST00000314358 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
KDM3B-201ENST00000314358 C16orf71Q8IYS4 520 aaPredicted RBP23.74■■□□□ 1.39
KDM3B-201ENST00000314358 NOS1P29475 1434 aa23.74■■□□□ 1.39
KDM3B-201ENST00000314358 ERCC5P28715 1186 aaPredicted RBP23.74■■□□□ 1.39
KDM3B-201ENST00000314358 TACC1O75410 805 aa23.74■■□□□ 1.39
KDM3B-201ENST00000314358 PKD2L1Q9P0L9 805 aa23.74■■□□□ 1.39
KDM3B-201ENST00000314358 SDSP20132 328 aa23.74■■□□□ 1.39
KDM3B-201ENST00000314358 MCM7P33993 719 aa23.74■■□□□ 1.39
KDM3B-201ENST00000314358 ERMNQ8TAM6 284 aa23.74■■□□□ 1.39
KDM3B-201ENST00000314358 RNASE9P60153 205 aaKnown RBP23.73■■□□□ 1.39
KDM3B-201ENST00000314358 MBIPQ9NS73 344 aa23.73■■□□□ 1.39
KDM3B-201ENST00000314358 HMGB2P26583 209 aaKnown RBP23.73■■□□□ 1.39
KDM3B-201ENST00000314358 SEC62Q99442 399 aaKnown RBP23.73■■□□□ 1.39
KDM3B-201ENST00000314358 PLVAPQ9BX97 442 aa23.73■■□□□ 1.39
KDM3B-201ENST00000314358 FAM13AO94988 1023 aa23.73■■□□□ 1.39
KDM3B-201ENST00000314358 ANKS4BQ8N8V4 417 aa23.73■■□□□ 1.39
KDM3B-201ENST00000314358 RBM26Q5T8P6 1007 aaKnown RBP23.73■■□□□ 1.39
KDM3B-201ENST00000314358 RBM8AQ9Y5S9 174 aaKnown RBP23.73■■□□□ 1.39
KDM3B-201ENST00000314358 ANAPC4Q9UJX5 808 aa23.73■■□□□ 1.39
KDM3B-201ENST00000314358 NBPF7P0C2Y1 421 aaPredicted RBP23.72■■□□□ 1.39
KDM3B-201ENST00000314358 CPLX4Q7Z7G2 160 aa23.72■■□□□ 1.39
KDM3B-201ENST00000314358 UBLCP1Q8WVY7 318 aaPredicted RBP23.72■■□□□ 1.39
KDM3B-201ENST00000314358 SYT10Q6XYQ8 523 aa23.72■■□□□ 1.39
KDM3B-201ENST00000314358 ZSCAN16Q9H4T2 348 aaPredicted RBP23.72■■□□□ 1.39
KDM3B-201ENST00000314358 LDHCP07864 332 aa23.72■■□□□ 1.39
KDM3B-201ENST00000314358 RASA3Q14644 834 aa23.72■■□□□ 1.39
KDM3B-201ENST00000314358 SMC1BQ8NDV3 1235 aa23.72■■□□□ 1.39
KDM3B-201ENST00000314358 SMARCC2Q8TAQ2 1214 aa23.72■■□□□ 1.39
KDM3B-201ENST00000314358 LRRC27Q9C0I9 530 aa23.72■■□□□ 1.39
KDM3B-201ENST00000314358 C8orf37Q96NL8 207 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 PPP1R7Q15435 360 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 UVSSAQ2YD98 709 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 MRPS27Q92552 414 aaKnown RBP23.71■■□□□ 1.39
KDM3B-201ENST00000314358 CTAGE1Q96RT6 745 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 KLHL40Q2TBA0 621 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 ODF2LQ9ULJ1 636 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 OPA1O60313 960 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 GOLGA1Q92805 767 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 PRIMPOLQ96LW4 560 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 RAPGEF1Q13905 1077 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 CCDC65Q8IXS2 484 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 RTL1A6NKG5 1358 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
KDM3B-201ENST00000314358 C10orf67Q8IYJ2 551 aa23.7■■□□□ 1.39
KDM3B-201ENST00000314358 DCAF17Q5H9S7 520 aaPredicted RBP23.7■■□□□ 1.38
KDM3B-201ENST00000314358 NBPF6Q5VWK0 638 aa23.7■■□□□ 1.38
KDM3B-201ENST00000314358 NBPF5PQ86XG9 351 aaPredicted RBP23.7■■□□□ 1.38
KDM3B-201ENST00000314358 NBPF4Q96M43 638 aa23.7■■□□□ 1.38
KDM3B-201ENST00000314358 CCDC77Q9BR77 488 aa23.7■■□□□ 1.38
KDM3B-201ENST00000314358 PYM1Q9BRP8 204 aaKnown RBP23.7■■□□□ 1.38
KDM3B-201ENST00000314358 GTF3C6Q969F1 213 aa23.7■■□□□ 1.38
KDM3B-201ENST00000314358 CHPF2Q9P2E5 772 aa23.7■■□□□ 1.38
KDM3B-201ENST00000314358 PTPRCP08575 1304 aa23.7■■□□□ 1.38
KDM3B-201ENST00000314358 MIGA1Q8NAN2 632 aa23.7■■□□□ 1.38
KDM3B-201ENST00000314358 MAP3K1Q13233 1512 aa23.7■■□□□ 1.38
KDM3B-201ENST00000314358 PPP1R21Q6ZMI0 780 aa23.69■■□□□ 1.38
KDM3B-201ENST00000314358 LRPPRCP42704 1394 aaKnown RBP23.69■■□□□ 1.38
KDM3B-201ENST00000314358 PSMA7O14818 248 aa23.69■■□□□ 1.38
KDM3B-201ENST00000314358 HARSP12081 509 aaKnown RBP23.69■■□□□ 1.38
KDM3B-201ENST00000314358 KIF5AQ12840 1032 aa23.69■■□□□ 1.38
KDM3B-201ENST00000314358 ANKRD24Q8TF21 1146 aa23.69■■□□□ 1.38
KDM3B-201ENST00000314358 MEIS3Q99687 375 aa23.69■■□□□ 1.38
KDM3B-201ENST00000314358 TXNDC16Q9P2K2 825 aa23.69■■□□□ 1.38
KDM3B-201ENST00000314358 PA2G4Q9UQ80 394 aaKnown RBP23.69■■□□□ 1.38
KDM3B-201ENST00000314358 TNNI2P48788 182 aa23.69■■□□□ 1.38
KDM3B-201ENST00000314358 VEZTQ9HBM0 779 aa23.69■■□□□ 1.38
KDM3B-201ENST00000314358 CFAP157Q5JU67 520 aa23.68■■□□□ 1.38
KDM3B-201ENST00000314358 PRIM1P49642 420 aaKnown RBP23.68■■□□□ 1.38
KDM3B-201ENST00000314358 RHPN1Q8TCX5 695 aa23.68■■□□□ 1.38
KDM3B-201ENST00000314358 CEP83Q9Y592 693 aa23.68■■□□□ 1.38
KDM3B-201ENST00000314358 RPUSD2Q8IZ73 545 aaKnown RBP23.68■■□□□ 1.38
KDM3B-201ENST00000314358 LRRC45Q96CN5 670 aa23.68■■□□□ 1.38
KDM3B-201ENST00000314358 ABCC11Q96J66 1382 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms