RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CTNNA3Q9UI47 895 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 LAMB4A4D0S4 1761 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
MKS1-201ENST00000313863 TRPM3Q9HCF6 1732 aaPredicted RBP16.17■□□□□ 0.18
MKS1-201ENST00000313863 CCDC69A6NI79 296 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 SPDYE4A6NLX3 237 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 NYAP1Q6ZVC0 841 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 DDX46Q7L014 1031 aaKnown RBP16.17■□□□□ 0.18
MKS1-201ENST00000313863 TTC5Q8N0Z6 440 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 KIF18AQ8NI77 898 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 USP28Q96RU2 1077 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 BPIFA3Q9BQP9 254 aa16.17■□□□□ 0.18
MKS1-201ENST00000313863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.17■□□□□ 0.18
MKS1-201ENST00000313863 STOX1Q6ZVD7 989 aa16.16■□□□□ 0.18
MKS1-201ENST00000313863 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
MKS1-201ENST00000313863 DHX40Q8IX18 779 aaKnown RBP16.16■□□□□ 0.18
MKS1-201ENST00000313863 FBXL16Q8N461 479 aa16.16■□□□□ 0.18
MKS1-201ENST00000313863 ZNF592Q92610 1267 aa16.16■□□□□ 0.18
MKS1-201ENST00000313863 GOLPH3LQ9H4A5 285 aa16.16■□□□□ 0.18
MKS1-201ENST00000313863 PAG1Q9NWQ8 432 aa16.16■□□□□ 0.18
MKS1-201ENST00000313863 SALL1Q9NSC2 1324 aa16.16■□□□□ 0.18
MKS1-201ENST00000313863 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
MKS1-201ENST00000313863 APOBRQ0VD83 1088 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 CCDC150Q8NCX0 1101 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 ZNF397Q8NF99 534 aaPredicted RBP16.15■□□□□ 0.18
MKS1-201ENST00000313863 ERO1AQ96HE7 468 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
MKS1-201ENST00000313863 PODXL2Q9NZ53 605 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 RTEL1Q9NZ71 1219 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 A0A087WZG4 1122 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 DHX16O60231 1041 aaKnown RBP16.15■□□□□ 0.18
MKS1-201ENST00000313863 CTDNEP1O95476 244 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 ZMYM1Q5SVZ6 1142 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 ADALQ6DHV7 355 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 RGS22Q8NE09 1264 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 KCNG4Q8TDN1 519 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 FMNL2Q96PY5 1086 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 SDF4Q9BRK5 362 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 LRRC2Q9BYS8 371 aa16.15■□□□□ 0.18
MKS1-201ENST00000313863 OSBPL5Q9H0X9 879 aaPredicted RBP16.15■□□□□ 0.18
MKS1-201ENST00000313863 DDX41Q9UJV9 622 aaKnown RBP16.15■□□□□ 0.18
MKS1-201ENST00000313863 KDM6AO15550 1401 aaPredicted RBP16.15■□□□□ 0.18
MKS1-201ENST00000313863 E7EWF7 191 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 KCNJ6P48051 423 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 SLC39A6Q13433 755 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 CCAR2Q8N163 923 aaKnown RBP16.14■□□□□ 0.17
MKS1-201ENST00000313863 CARMIL3Q8ND23 1372 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 ERBB3P21860 1342 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 CCZ1BP86790 482 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 CCZ1P86791 482 aaPredicted RBP16.14■□□□□ 0.17
MKS1-201ENST00000313863 SLFNL1Q499Z3 407 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 FMR1NBQ8N0W7 255 aaPredicted RBP16.14■□□□□ 0.17
MKS1-201ENST00000313863 AOPEPQ8N6M6 819 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 PLBD2Q8NHP8 589 aa16.14■□□□□ 0.17
MKS1-201ENST00000313863 ZHX1Q9UKY1 873 aaPredicted RBP16.14■□□□□ 0.17
MKS1-201ENST00000313863 MORC2Q9Y6X9 1032 aaPredicted RBP16.14■□□□□ 0.17
MKS1-201ENST00000313863 YEATS4O95619 227 aa16.13■□□□□ 0.17
MKS1-201ENST00000313863 PHKG2P15735 406 aa16.13■□□□□ 0.17
MKS1-201ENST00000313863 PDIA3P30101 505 aaKnown RBP16.13■□□□□ 0.17
MKS1-201ENST00000313863 IL15P40933 162 aaPredicted RBP16.13■□□□□ 0.17
MKS1-201ENST00000313863 SF3A1Q15459 793 aaKnown RBP16.13■□□□□ 0.17
MKS1-201ENST00000313863 FILIP1Q7Z7B0 1213 aa16.13■□□□□ 0.17
MKS1-201ENST00000313863 IFNL2Q8IZJ0 200 aa16.13■□□□□ 0.17
MKS1-201ENST00000313863 GOLIM4O00461 696 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 RNF113AO15541 343 aaKnown RBP16.12■□□□□ 0.17
MKS1-201ENST00000313863 CCP110O43303 1012 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 EVCP57679 992 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 CCT2P78371 535 aaKnown RBP16.12■□□□□ 0.17
MKS1-201ENST00000313863 STK38Q15208 465 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 LRP10Q7Z4F1 713 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 BRAPQ7Z569 592 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 NFATC2IPQ8NCF5 419 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.12■□□□□ 0.17
MKS1-201ENST00000313863 ZNF496Q96IT1 587 aaPredicted RBP16.12■□□□□ 0.17
MKS1-201ENST00000313863 NAP1L2Q9ULW6 460 aaPredicted RBP16.12■□□□□ 0.17
MKS1-201ENST00000313863 USP16Q9Y5T5 823 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 TMEM94Q12767 1356 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 SLU7O95391 586 aaKnown RBP16.12■□□□□ 0.17
MKS1-201ENST00000313863 HSPD1P10809 573 aaKnown RBP16.12■□□□□ 0.17
MKS1-201ENST00000313863 TAF3Q5VWG9 929 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 LMOD2Q6P5Q4 547 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 PCDHA7Q9UN72 937 aa16.12■□□□□ 0.17
MKS1-201ENST00000313863 PSDA5PKW4 1024 aaPredicted RBP16.11■□□□□ 0.17
MKS1-201ENST00000313863 FOSBP53539 338 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 CASP7P55210 303 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 LMBR1LQ6UX01 489 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 DCAF5Q96JK2 942 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 NEUROD6Q96NK8 337 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 POLR3EQ9NVU0 708 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 KIAA1468Q9P260 1216 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 AXIN2Q9Y2T1 843 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 NDUFB9Q9Y6M9 179 aa16.11■□□□□ 0.17
MKS1-201ENST00000313863 ZFYP08048 801 aaPredicted RBP16.1■□□□□ 0.17
MKS1-201ENST00000313863 FAM193AP78312 1265 aa16.1■□□□□ 0.17
MKS1-201ENST00000313863 KRT222Q8N1A0 295 aa16.1■□□□□ 0.17
MKS1-201ENST00000313863 LINC00301Q8NCQ3 95 aa16.1■□□□□ 0.17
MKS1-201ENST00000313863 C8orf76Q96K31 380 aa16.1■□□□□ 0.17
MKS1-201ENST00000313863 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
MKS1-201ENST00000313863 H7C1W4 665 aa16.09■□□□□ 0.17
MKS1-201ENST00000313863 IFIT1P09914 478 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms