RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 CHAMP1Q96JM3 812 aa12.33□□□□□ -0.44
KDM2A-201ENST00000308783 TRMT112Q9UI30 125 aaKnown RBP12.33□□□□□ -0.44
KDM2A-201ENST00000308783 SGSM2O43147 1006 aa12.32□□□□□ -0.44
KDM2A-201ENST00000308783 HMGB1P09429 215 aaKnown RBP12.32□□□□□ -0.44
KDM2A-201ENST00000308783 PPP2R5AQ15172 486 aa12.32□□□□□ -0.44
KDM2A-201ENST00000308783 MYRIPQ8NFW9 859 aa12.32□□□□□ -0.44
KDM2A-201ENST00000308783 NOL10Q9BSC4 688 aaKnown RBP12.32□□□□□ -0.44
KDM2A-201ENST00000308783 RASSF4Q9H2L5 321 aa12.32□□□□□ -0.44
KDM2A-201ENST00000308783 GREM2Q9H772 168 aa12.32□□□□□ -0.44
KDM2A-201ENST00000308783 PCCAP05165 728 aaPredicted RBP12.32□□□□□ -0.44
KDM2A-201ENST00000308783 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
KDM2A-201ENST00000308783 GPATCH3Q96I76 525 aa12.32□□□□□ -0.44
KDM2A-201ENST00000308783 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.44
KDM2A-201ENST00000308783 LINC00116Q8NCU8 138 aa12.32□□□□□ -0.44
KDM2A-201ENST00000308783 UPF3BQ9BZI7 483 aaKnown RBP12.32□□□□□ -0.44
KDM2A-201ENST00000308783 PTH1RQ03431 593 aa12.31□□□□□ -0.44
KDM2A-201ENST00000308783 PRPF38AQ8NAV1 312 aaKnown RBP12.31□□□□□ -0.44
KDM2A-201ENST00000308783 BCL2L12Q9HB09 334 aa12.31□□□□□ -0.44
KDM2A-201ENST00000308783 K7ELQ4 463 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-201ENST00000308783 DHX16O60231 1041 aaKnown RBP12.31□□□□□ -0.44
KDM2A-201ENST00000308783 HCLS1P14317 486 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-201ENST00000308783 CCDC57Q2TAC2 916 aa12.31□□□□□ -0.44
KDM2A-201ENST00000308783 DIAPH3Q9NSV4 1193 aa12.31□□□□□ -0.44
KDM2A-201ENST00000308783 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
KDM2A-201ENST00000308783 EYA2O00167 538 aa12.31□□□□□ -0.44
KDM2A-201ENST00000308783 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
KDM2A-201ENST00000308783 SUSD4Q5VX71 490 aa12.31□□□□□ -0.44
KDM2A-201ENST00000308783 SGSM3Q96HU1 749 aa12.31□□□□□ -0.44
KDM2A-201ENST00000308783 NUP98P52948 1817 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 CHAF1AQ13111 956 aaPredicted RBP12.3□□□□□ -0.44
KDM2A-201ENST00000308783 RABEP1Q15276 862 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 E2F4Q16254 413 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 NBPF20Q3BBV1 942 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 LSG1Q9H089 658 aaKnown RBP12.3□□□□□ -0.44
KDM2A-201ENST00000308783 A0A0D9SFI3 127 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 NEK4P51957 841 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 HMGN5P82970 282 aaKnown RBP12.3□□□□□ -0.44
KDM2A-201ENST00000308783 NMIQ13287 307 aaPredicted RBP12.3□□□□□ -0.44
KDM2A-201ENST00000308783 DDX46Q7L014 1031 aaKnown RBP12.3□□□□□ -0.44
KDM2A-201ENST00000308783 RASEFQ8IZ41 740 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 EVI5LQ96CN4 794 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 LARP6Q9BRS8 491 aaKnown RBP12.3□□□□□ -0.44
KDM2A-201ENST00000308783 FSD1Q9BTV5 496 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 NOL7Q9UMY1 257 aaKnown RBP12.3□□□□□ -0.44
KDM2A-201ENST00000308783 AFF2P51816 1311 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 KIAA2012Q0VF49 1180 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 LRCH2Q5VUJ6 765 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 ICE2Q659A1 982 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 AMIGO3Q86WK7 504 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 SRCAPQ6ZRS2 3230 aa12.3□□□□□ -0.44
KDM2A-201ENST00000308783 CAMTA2O94983 1202 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 ITGA6P23229 1130 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 COL9A3Q14050 684 aaPredicted RBP12.29□□□□□ -0.44
KDM2A-201ENST00000308783 ZNF34Q8IZ26 560 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 CHMP5Q9NZZ3 219 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 ZKSCAN5Q9Y2L8 839 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 SPATA31A6Q5VVP1 1343 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 A0A1B0GUL7 405 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 CSF1RP07333 972 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 CPA1P15085 419 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 ADORA1P30542 326 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 ARMCX6Q7L4S7 300 aa12.29□□□□□ -0.44
KDM2A-201ENST00000308783 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
KDM2A-201ENST00000308783 SEC62Q99442 399 aaKnown RBP12.29□□□□□ -0.44
KDM2A-201ENST00000308783 IL15P40933 162 aaPredicted RBP12.28□□□□□ -0.44
KDM2A-201ENST00000308783 GABPB1Q06547 395 aaPredicted RBP12.28□□□□□ -0.44
KDM2A-201ENST00000308783 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
KDM2A-201ENST00000308783 ZNF589Q86UQ0 364 aaPredicted RBP12.28□□□□□ -0.44
KDM2A-201ENST00000308783 MRVI1Q9Y6F6 885 aa12.28□□□□□ -0.44
KDM2A-201ENST00000308783 ERVV-1B6SEH8 477 aa12.28□□□□□ -0.44
KDM2A-201ENST00000308783 SNAP23O00161 211 aa12.28□□□□□ -0.44
KDM2A-201ENST00000308783 CTSWP56202 376 aa12.28□□□□□ -0.44
KDM2A-201ENST00000308783 OGFRQ9NZT2 677 aa12.28□□□□□ -0.44
KDM2A-201ENST00000308783 ATP5JP18859 108 aa12.27□□□□□ -0.44
KDM2A-201ENST00000308783 DDIT3P35638 169 aa12.27□□□□□ -0.44
KDM2A-201ENST00000308783 BICDL1Q6ZP65 573 aa12.27□□□□□ -0.44
KDM2A-201ENST00000308783 DEF6Q9H4E7 631 aa12.27□□□□□ -0.44
KDM2A-201ENST00000308783 NIP7Q9Y221 180 aaKnown RBP eCLIP12.27□□□□□ -0.44
KDM2A-201ENST00000308783 RAD50Q92878 1312 aa12.27□□□□□ -0.44
KDM2A-201ENST00000308783 HSPA4P34932 840 aa12.27□□□□□ -0.45
KDM2A-201ENST00000308783 ZGPATQ8N5A5 531 aaKnown RBP12.27□□□□□ -0.45
KDM2A-201ENST00000308783 SNRKQ9NRH2 765 aa12.27□□□□□ -0.45
KDM2A-201ENST00000308783 DDX49Q9Y6V7 483 aaKnown RBP12.27□□□□□ -0.45
KDM2A-201ENST00000308783 CCDC129Q6ZRS4 1044 aa12.27□□□□□ -0.45
KDM2A-201ENST00000308783 HELBQ8NG08 1087 aaPredicted RBP12.27□□□□□ -0.45
KDM2A-201ENST00000308783 PLA2G12BQ9BX93 195 aa12.27□□□□□ -0.45
KDM2A-201ENST00000308783 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
KDM2A-201ENST00000308783 TAF6LQ9Y6J9 622 aa12.27□□□□□ -0.45
KDM2A-201ENST00000308783 RAD51AP2Q09MP3 1159 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 PI16Q6UXB8 463 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 SEC31BQ9NQW1 1179 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 HNRNPH2P55795 449 aaKnown RBP12.26□□□□□ -0.45
KDM2A-201ENST00000308783 CEP120Q8N960 986 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 SNX14Q9Y5W7 946 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 SLFN14P0C7P3 912 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 SCARF1Q14162 830 aa12.26□□□□□ -0.45
KDM2A-201ENST00000308783 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms