RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 COA1Q9GZY4 146 aa13.64□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 CEP126Q9P2H0 1117 aa13.64□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 IQCA1LA6NCM1 817 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 HMMRO75330 724 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 RAD17O75943 681 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 SLC5A1P13866 664 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 PODNQ7Z5L7 613 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 FBXW7Q969H0 707 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 NMRK2Q9NPI5 230 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 ZBTB40Q9NUA8 1239 aa13.63□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 YDJCA8MPS7 323 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 SNAP23O00161 211 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 IFIT1P09914 478 aaKnown RBP13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 KLRK1P26718 216 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 CXCL9Q07325 125 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 POLA2Q14181 598 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 CAVIN4Q5BKX8 364 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 C15orf52Q6ZUT6 534 aaKnown RBP13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 ATG9AQ7Z3C6 839 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 RPAP2Q8IXW5 612 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 VGLL2Q8N8G2 317 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 SSH3Q8TE77 659 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 L3MBTL3Q96JM7 780 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 RRAGCQ9HB90 399 aa13.62□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 WTIPA6NIX2 430 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 PSMD14O00487 310 aa13.61□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 VEGFAP15692 232 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 ATP2B3Q16720 1220 aa13.61□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 TXNRD3Q86VQ6 643 aa13.61□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 LPIN2Q92539 896 aa13.61□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 HACL1Q9UJ83 578 aa13.61□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 SUPT16HQ9Y5B9 1047 aaKnown RBP13.61□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 USP17L3A6NCW0 530 aa13.6□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 USP17L4A6NCW7 530 aa13.6□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 SURF6O75683 361 aaKnown RBP13.6□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 HSP90AB4PQ58FF6 505 aa13.6□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 USP17L1Q7RTZ2 530 aa13.6□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 AKAP2Q9Y2D5 859 aa13.6□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 ZNF609O15014 1411 aa13.59□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 RPS12P25398 132 aaKnown RBP13.59□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 HIBADHP31937 336 aaKnown RBP13.59□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 GYG1P46976 350 aa13.59□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 CD209Q9NNX6 404 aa13.59□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 IRS2Q9Y4H2 1338 aa13.59□□□□□ -0.23
CSPG4P1Y-201ENST00000306641 ECM29Q5VYK3 1845 aa13.58□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 KIF3CO14782 793 aa13.58□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 FGFR2P21802 821 aa13.58□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 EPHX2P34913 555 aa13.58□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TFCP2Q12800 502 aa13.58□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 ERC1Q8IUD2 1116 aa13.58□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 MYO3BQ8WXR4 1341 aa13.58□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 VIL1P09327 827 aaKnown RBP13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 IL1R1P14778 569 aa13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 SCNN1DP51172 638 aa13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 GTF2IP78347 998 aa13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 EAPPQ56P03 285 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 STRIP1Q5VSL9 837 aa13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TTLL5Q6EMB2 1281 aa13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 RSBN1LQ6PCB5 846 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 KCNQ5Q9NR82 932 aa13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 GPRC5DQ9NZD1 345 aa13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 EXOC6BQ9Y2D4 811 aa13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 NOP58Q9Y2X3 529 aaKnown RBP13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 ADAMTSL1Q8N6G6 1762 aa13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 A0A1B0GUL7 405 aa13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 H7C1D1 291 aa13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 PNMA8AQ86V59 439 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 AGBL3Q8NEM8 1001 aa13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 DPF2Q92785 391 aa13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 FAM84BQ96KN1 310 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 NEUROD6Q96NK8 337 aa13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TAF1DQ9H5J8 278 aaPredicted RBP13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 GNL3LQ9NVN8 582 aaKnown RBP13.56□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 POTECB2RU33 542 aa13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TOMM70O94826 608 aa13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 BCAMP50895 628 aa13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 AAMPQ13685 434 aa13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 GORABQ5T7V8 394 aa13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 FBXO33Q7Z6M2 555 aa13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 MICALL2Q8IY33 904 aa13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 ADARB2Q9NS39 739 aaKnown RBP13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 CNOT7Q9UIV1 285 aaKnown RBP13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 HDAC9Q9UKV0 1011 aa13.55□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 APBB1O00213 710 aa13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 SASH1O94885 1247 aa13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 EPS15P42566 896 aa13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 CHAF1AQ13111 956 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 DACT2Q5SW24 774 aa13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 USP50Q70EL3 339 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 OGFOD1Q8N543 542 aa13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 TDRD7Q8NHU6 1098 aaKnown RBP13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 RBM46Q8TBY0 533 aaKnown RBP13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 GPR108Q9NPR9 543 aa13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 IQSEC3Q9UPP2 1182 aaPredicted RBP13.54□□□□□ -0.24
CSPG4P1Y-201ENST00000306641 CLEC11AQ9Y240 323 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms