RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 IFNL1Q8IU54 200 aa8.46□□□□□ -1.06
ITGB1-201ENST00000302278 ZNF804BA4D1E1 1349 aa8.45□□□□□ -1.06
ITGB1-201ENST00000302278 EIF2S2P20042 333 aaKnown RBP8.45□□□□□ -1.06
ITGB1-201ENST00000302278 COA1Q9GZY4 146 aa8.45□□□□□ -1.06
ITGB1-201ENST00000302278 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
ITGB1-201ENST00000302278 HDAC9Q9UKV0 1011 aa8.45□□□□□ -1.06
ITGB1-201ENST00000302278 PTPN22Q9Y2R2 807 aa8.45□□□□□ -1.06
ITGB1-201ENST00000302278 OTOP1Q7RTM1 612 aa8.45□□□□□ -1.06
ITGB1-201ENST00000302278 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 R3HDMLQ9H3Y0 253 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 ZSWIM8A7E2V4 1837 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 ARMC9Q7Z3E5 817 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 SEC31BQ9NQW1 1179 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 UBE2Q2LH0YL09 131 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 PTPN12Q05209 780 aaKnown RBP8.44□□□□□ -1.06
ITGB1-201ENST00000302278 NBPF9Q3BBW0 867 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 ERO1AQ96HE7 468 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 LEMD3Q9Y2U8 911 aa8.44□□□□□ -1.06
ITGB1-201ENST00000302278 NF2P35240 595 aa8.43□□□□□ -1.06
ITGB1-201ENST00000302278 AIMP1Q12904 312 aaKnown RBP8.43□□□□□ -1.06
ITGB1-201ENST00000302278 RBM26Q5T8P6 1007 aaKnown RBP8.43□□□□□ -1.06
ITGB1-201ENST00000302278 MOB2Q70IA6 237 aa8.43□□□□□ -1.06
ITGB1-201ENST00000302278 RALBP1Q15311 655 aa8.43□□□□□ -1.06
ITGB1-201ENST00000302278 CCER1Q8TC90 406 aaPredicted RBP8.43□□□□□ -1.06
ITGB1-201ENST00000302278 WNK4Q96J92 1243 aa8.43□□□□□ -1.06
ITGB1-201ENST00000302278 POTEFA5A3E0 1075 aa8.43□□□□□ -1.06
ITGB1-201ENST00000302278 ZNF333Q96JL9 665 aa8.43□□□□□ -1.06
ITGB1-201ENST00000302278 METTL22Q9BUU2 404 aaPredicted RBP8.43□□□□□ -1.06
ITGB1-201ENST00000302278 ZCCHC17Q9NP64 241 aaKnown RBP8.43□□□□□ -1.06
ITGB1-201ENST00000302278 CTSWP56202 376 aa8.42□□□□□ -1.06
ITGB1-201ENST00000302278 ANKRD18AQ8IVF6 992 aa8.42□□□□□ -1.06
ITGB1-201ENST00000302278 PRO3102Q9H379 93 aa8.42□□□□□ -1.06
ITGB1-201ENST00000302278 MINPP1Q9UNW1 487 aa8.42□□□□□ -1.06
ITGB1-201ENST00000302278 OTUD5Q96G74 571 aa8.42□□□□□ -1.06
ITGB1-201ENST00000302278 ANKIB1Q9P2G1 1089 aa8.42□□□□□ -1.06
ITGB1-201ENST00000302278 IGF2BP3O00425 579 aaKnown RBP eCLIP8.42□□□□□ -1.06
ITGB1-201ENST00000302278 KRT24Q2M2I5 525 aa8.42□□□□□ -1.06
ITGB1-201ENST00000302278 CDC5LQ99459 802 aaKnown RBP8.42□□□□□ -1.06
ITGB1-201ENST00000302278 CWC25Q9NXE8 425 aaPredicted RBP8.42□□□□□ -1.06
ITGB1-201ENST00000302278 ATP5J2-PTCD1G3V325 749 aa8.41□□□□□ -1.06
ITGB1-201ENST00000302278 CAPN2P17655 700 aa8.41□□□□□ -1.06
ITGB1-201ENST00000302278 CCT4P50991 539 aaKnown RBP8.41□□□□□ -1.06
ITGB1-201ENST00000302278 TTLL11Q8NHH1 800 aa8.41□□□□□ -1.06
ITGB1-201ENST00000302278 RUNDC1Q96C34 613 aa8.41□□□□□ -1.06
ITGB1-201ENST00000302278 ALPK3Q96L96 1907 aa8.41□□□□□ -1.06
ITGB1-201ENST00000302278 DUSP27Q5VZP5 1158 aa8.41□□□□□ -1.06
ITGB1-201ENST00000302278 IFT57Q9NWB7 429 aa8.41□□□□□ -1.06
ITGB1-201ENST00000302278 CHMP4AQ9BY43 222 aa8.41□□□□□ -1.06
ITGB1-201ENST00000302278 IL1R1P14778 569 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 CASP7P55210 303 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 GOLGA2Q08379 1002 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 GNRH1P01148 92 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 CSF1RP07333 972 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 GJA5P36382 358 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 UBE2Q1Q7Z7E8 422 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 OGFOD1Q8N543 542 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 MBIPQ9NS73 344 aa8.4□□□□□ -1.06
ITGB1-201ENST00000302278 MYH13Q9UKX3 1938 aa8.4□□□□□ -1.07
ITGB1-201ENST00000302278 PHIPQ8WWQ0 1821 aa8.4□□□□□ -1.07
ITGB1-201ENST00000302278 H7C1W4 665 aa8.4□□□□□ -1.07
ITGB1-201ENST00000302278 CAP1Q01518 475 aa8.4□□□□□ -1.07
ITGB1-201ENST00000302278 MS4A4AQ96JQ5 239 aa8.4□□□□□ -1.07
ITGB1-201ENST00000302278 ANKRD2Q9GZV1 360 aa8.4□□□□□ -1.07
ITGB1-201ENST00000302278 IGKV5-2P06315 115 aa8.39□□□□□ -1.07
ITGB1-201ENST00000302278 NCBP3Q53F19 620 aaKnown RBP8.39□□□□□ -1.07
ITGB1-201ENST00000302278 RPAP1Q9BWH6 1393 aaPredicted RBP8.39□□□□□ -1.07
ITGB1-201ENST00000302278 PRMT2P55345 433 aa8.39□□□□□ -1.07
ITGB1-201ENST00000302278 PTPN18Q99952 460 aa8.39□□□□□ -1.07
ITGB1-201ENST00000302278 TRIM17Q9Y577 477 aa8.39□□□□□ -1.07
ITGB1-201ENST00000302278 MYBBP1AQ9BQG0 1328 aaKnown RBP8.39□□□□□ -1.07
ITGB1-201ENST00000302278 PTPRFP10586 1907 aa8.39□□□□□ -1.07
ITGB1-201ENST00000302278 USP2O75604 605 aaPredicted RBP8.39□□□□□ -1.07
ITGB1-201ENST00000302278 CRHR2Q13324 411 aa8.39□□□□□ -1.07
ITGB1-201ENST00000302278 DOCK2Q92608 1830 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 A0A1W2PPC1 479 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 G3V3G9 751 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 DCAF8Q5TAQ9 597 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 MYD88Q99836 296 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 DEFB129Q9H1M3 183 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 PHAXQ9H814 394 aaKnown RBP8.38□□□□□ -1.07
ITGB1-201ENST00000302278 FAM205AQ6ZU69 1335 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 SPDYE2BA6NHP3 402 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 SPDYE6P0CI01 402 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 OTUD7BQ6GQQ9 843 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 TXNRD3Q86VQ6 643 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 CERS5Q8N5B7 392 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 ADGRA2Q96PE1 1338 aa8.38□□□□□ -1.07
ITGB1-201ENST00000302278 SP3Q02447 781 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 SUPT20HL1Q3ZLR7 823 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 KSR2Q6VAB6 950 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 MXD3Q9BW11 206 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 GREM2Q9H772 168 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 ANGEL1Q9UNK9 670 aaKnown RBP8.37□□□□□ -1.07
ITGB1-201ENST00000302278 LOC285556D6RIA3 1793 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 WTIPA6NIX2 430 aaPredicted RBP8.37□□□□□ -1.07
ITGB1-201ENST00000302278 SASH1O94885 1247 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 PRAMEF18Q5VWM3 479 aa8.37□□□□□ -1.07
ITGB1-201ENST00000302278 ANKRD13AQ8IZ07 590 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms