RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 CCT4P50991 539 aaKnown RBP11.58□□□□□ -0.56
HMGN1-201ENST00000288344 C1QTNF8P60827 252 aa11.58□□□□□ -0.56
HMGN1-201ENST00000288344 CXCL9Q07325 125 aa11.58□□□□□ -0.56
HMGN1-201ENST00000288344 AOC3Q16853 763 aa11.58□□□□□ -0.56
HMGN1-201ENST00000288344 SUPT20HQ8NEM7 779 aa11.58□□□□□ -0.56
HMGN1-201ENST00000288344 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
HMGN1-201ENST00000288344 CDC5LQ99459 802 aaKnown RBP11.58□□□□□ -0.56
HMGN1-201ENST00000288344 BICC1Q9H694 974 aaKnown RBP11.58□□□□□ -0.56
HMGN1-201ENST00000288344 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
HMGN1-201ENST00000288344 KDM2BQ8NHM5 1336 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 SCN9AQ15858 1988 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 PPP1R37O75864 691 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 RLBP1P12271 317 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 VEGFAP15692 232 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-201ENST00000288344 NBR1Q14596 966 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 DPY19L2Q6NUT2 758 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 C15orf52Q6ZUT6 534 aaKnown RBP11.57□□□□□ -0.56
HMGN1-201ENST00000288344 TXNRD3Q86VQ6 643 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 GPC2Q8N158 579 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 LARGE2Q8N3Y3 721 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 EFCAB3Q8N7B9 438 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 FBXO22Q8NEZ5 403 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 KCNQ5Q9NR82 932 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 ZNRF3Q9ULT6 936 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 KIF16BQ96L93 1317 aa11.57□□□□□ -0.56
HMGN1-201ENST00000288344 SCN4AP35499 1836 aa11.56□□□□□ -0.56
HMGN1-201ENST00000288344 A0A1B0GUL6 1792 aa11.56□□□□□ -0.56
HMGN1-201ENST00000288344 PPIP5K2O43314 1243 aa11.56□□□□□ -0.56
HMGN1-201ENST00000288344 TOMM70O94826 608 aa11.56□□□□□ -0.56
HMGN1-201ENST00000288344 SCNN1DP51172 638 aa11.56□□□□□ -0.56
HMGN1-201ENST00000288344 WASHC4Q2M389 1173 aa11.56□□□□□ -0.56
HMGN1-201ENST00000288344 ZNF594Q96JF6 807 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-201ENST00000288344 GPR101Q96P66 508 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-201ENST00000288344 MEIS3Q99687 375 aa11.56□□□□□ -0.56
HMGN1-201ENST00000288344 ZNF646O15015 1829 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-201ENST00000288344 XDHP47989 1333 aa11.56□□□□□ -0.56
HMGN1-201ENST00000288344 ADAMTSL1Q8N6G6 1762 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 ANKRD18BA2A2Z9 1011 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 SNAP23O00161 211 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 IPO8O15397 1037 aaKnown RBP11.55□□□□□ -0.56
HMGN1-201ENST00000288344 ATP2B4P23634 1241 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 CHRNDQ07001 517 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 IFIT5Q13325 482 aaKnown RBP11.55□□□□□ -0.56
HMGN1-201ENST00000288344 MTX1Q13505 466 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 VGLL2Q8N8G2 317 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 RBM46Q8TBY0 533 aaKnown RBP11.55□□□□□ -0.56
HMGN1-201ENST00000288344 JDP2Q8WYK2 163 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 PUS3Q9BZE2 481 aaKnown RBP11.55□□□□□ -0.56
HMGN1-201ENST00000288344 LEMD3Q9Y2U8 911 aa11.55□□□□□ -0.56
HMGN1-201ENST00000288344 SPEF2Q9C093 1822 aa11.54□□□□□ -0.56
HMGN1-201ENST00000288344 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-201ENST00000288344 C7P10643 843 aa11.54□□□□□ -0.56
HMGN1-201ENST00000288344 PTPN12Q05209 780 aaKnown RBP11.54□□□□□ -0.56
HMGN1-201ENST00000288344 TMEM57Q8N5G2 664 aa11.54□□□□□ -0.56
HMGN1-201ENST00000288344 GMLQ99445 158 aa11.54□□□□□ -0.56
HMGN1-201ENST00000288344 TAF1DQ9H5J8 278 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-201ENST00000288344 GGA1Q9UJY5 639 aa11.54□□□□□ -0.56
HMGN1-201ENST00000288344 ZNF609O15014 1411 aa11.54□□□□□ -0.56
HMGN1-201ENST00000288344 PSME4Q14997 1843 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 C6orf229H3BNL8 230 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 UFL1O94874 794 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 VIL1P09327 827 aaKnown RBP11.53□□□□□ -0.56
HMGN1-201ENST00000288344 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 KLRK1P26718 216 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 IGHMBP2P38935 993 aaKnown RBP11.53□□□□□ -0.56
HMGN1-201ENST00000288344 ZKSCAN2Q63HK3 967 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 ATG9AQ7Z3C6 839 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 TMX4Q9H1E5 349 aaPredicted RBP11.53□□□□□ -0.56
HMGN1-201ENST00000288344 PGAP2Q9UHJ9 254 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 METRNQ9UJH8 293 aa11.53□□□□□ -0.56
HMGN1-201ENST00000288344 MED23Q9ULK4 1368 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 ZNF804BA4D1E1 1349 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 RIMBP2O15034 1052 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 EPS15P42566 896 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 DOK7Q18PE1 504 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 LRRC24Q50LG9 513 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 LDHAL6AQ6ZMR3 332 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 NIM1KQ8IY84 436 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 KLHDC4Q8TBB5 520 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 DPF2Q92785 391 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 ZC3H12CQ9C0D7 883 aaKnown RBP11.52□□□□□ -0.57
HMGN1-201ENST00000288344 ANKRD2Q9GZV1 360 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 DBNDD1Q9H9R9 158 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 ANKIB1Q9P2G1 1089 aa11.52□□□□□ -0.57
HMGN1-201ENST00000288344 PSMD14O00487 310 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 TAF5LO75529 589 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 RAD17O75943 681 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 ITGBL1O95965 494 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-201ENST00000288344 FGFR2P21802 821 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 HIRAP54198 1017 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-201ENST00000288344 EIF6P56537 245 aaKnown RBP11.51□□□□□ -0.57
HMGN1-201ENST00000288344 FSTL1Q12841 308 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 CIAPIN1Q6FI81 312 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 HELBQ8NG08 1087 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-201ENST00000288344 FRAT1Q92837 279 aaPredicted RBP11.51□□□□□ -0.57
HMGN1-201ENST00000288344 CLUAP1Q96AJ1 413 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 EYA3Q99504 573 aa11.51□□□□□ -0.57
HMGN1-201ENST00000288344 MPHOSPH8Q99549 860 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms