RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 SHTN1A0MZ66 631 aa10.53□□□□□ -0.72
ERCC8-201ENST00000265038 EYA2O00167 538 aa10.53□□□□□ -0.72
ERCC8-201ENST00000265038 LMOD1P29536 600 aaPredicted RBP10.53□□□□□ -0.72
ERCC8-201ENST00000265038 FSTL1Q12841 308 aa10.53□□□□□ -0.72
ERCC8-201ENST00000265038 MTX1Q13505 466 aa10.53□□□□□ -0.72
ERCC8-201ENST00000265038 ATG9AQ7Z3C6 839 aa10.53□□□□□ -0.72
ERCC8-201ENST00000265038 VGLL2Q8N8G2 317 aa10.53□□□□□ -0.72
ERCC8-201ENST00000265038 SMC1BQ8NDV3 1235 aa10.53□□□□□ -0.72
ERCC8-201ENST00000265038 PA2G4Q9UQ80 394 aaKnown RBP10.53□□□□□ -0.72
ERCC8-201ENST00000265038 UBE4AQ14139 1066 aa10.52□□□□□ -0.73
ERCC8-201ENST00000265038 EAPPQ56P03 285 aaPredicted RBP10.52□□□□□ -0.73
ERCC8-201ENST00000265038 METTL24Q5JXM2 366 aa10.52□□□□□ -0.73
ERCC8-201ENST00000265038 DPF2Q92785 391 aa10.52□□□□□ -0.73
ERCC8-201ENST00000265038 CD209Q9NNX6 404 aa10.52□□□□□ -0.73
ERCC8-201ENST00000265038 USP17L3A6NCW0 530 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 USP17L4A6NCW7 530 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 SRGAP3O43295 1099 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 PDE8BO95263 885 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 USP17L1Q7RTZ2 530 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 PNMA8AQ86V59 439 aaPredicted RBP10.51□□□□□ -0.73
ERCC8-201ENST00000265038 LDHDQ86WU2 507 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 SIL1Q9H173 461 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 COPRSQ9NQ92 184 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 CNOT7Q9UIV1 285 aaKnown RBP10.51□□□□□ -0.73
ERCC8-201ENST00000265038 MYH3P11055 1940 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 PNMA6EA0A0J9YXQ4 647 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 CIAO1O76071 339 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 MS4A1P11836 297 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 RPS12P25398 132 aaKnown RBP10.51□□□□□ -0.73
ERCC8-201ENST00000265038 CHADLQ6NUI6 762 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 RSBN1LQ6PCB5 846 aaPredicted RBP10.51□□□□□ -0.73
ERCC8-201ENST00000265038 GMLQ99445 158 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 ADARB2Q9NS39 739 aaKnown RBP10.51□□□□□ -0.73
ERCC8-201ENST00000265038 FBXO3Q9UK99 471 aa10.51□□□□□ -0.73
ERCC8-201ENST00000265038 IL1R1P14778 569 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 FGFR2P21802 821 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 HIRAP54198 1017 aaPredicted RBP10.5□□□□□ -0.73
ERCC8-201ENST00000265038 DACT2Q5SW24 774 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 C20orf194Q5TEA3 1177 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 STRIP1Q5VSL9 837 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 USP50Q70EL3 339 aaPredicted RBP10.5□□□□□ -0.73
ERCC8-201ENST00000265038 MICALL2Q8IY33 904 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 FAM84BQ96KN1 310 aaPredicted RBP10.5□□□□□ -0.73
ERCC8-201ENST00000265038 MXD3Q9BW11 206 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 HSPA6P17066 643 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 GYG1P46976 350 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 ATP8B2P98198 1209 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 MVPQ14764 893 aaKnown RBP10.5□□□□□ -0.73
ERCC8-201ENST00000265038 ZNF804AQ7Z570 1209 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 AGBL3Q8NEM8 1001 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 TRPM4Q8TD43 1214 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 COG6Q9Y2V7 657 aa10.5□□□□□ -0.73
ERCC8-201ENST00000265038 H7C1D1 291 aa10.49□□□□□ -0.73
ERCC8-201ENST00000265038 IL15P40933 162 aaPredicted RBP10.49□□□□□ -0.73
ERCC8-201ENST00000265038 GTF2IP78347 998 aa10.49□□□□□ -0.73
ERCC8-201ENST00000265038 POLA2Q14181 598 aa10.49□□□□□ -0.73
ERCC8-201ENST00000265038 TTLL5Q6EMB2 1281 aa10.49□□□□□ -0.73
ERCC8-201ENST00000265038 SAMD7Q7Z3H4 446 aa10.49□□□□□ -0.73
ERCC8-201ENST00000265038 FBXO33Q7Z6M2 555 aa10.49□□□□□ -0.73
ERCC8-201ENST00000265038 CLEC11AQ9Y240 323 aa10.49□□□□□ -0.73
ERCC8-201ENST00000265038 ITGBL1O95965 494 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-201ENST00000265038 EGFRP00533 1210 aa10.48□□□□□ -0.73
ERCC8-201ENST00000265038 HIBADHP31937 336 aaKnown RBP10.48□□□□□ -0.73
ERCC8-201ENST00000265038 PUM3Q15397 648 aaKnown RBP10.48□□□□□ -0.73
ERCC8-201ENST00000265038 MAP1SQ66K74 1059 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-201ENST00000265038 TDRD7Q8NHU6 1098 aaKnown RBP10.48□□□□□ -0.73
ERCC8-201ENST00000265038 FBXW7Q969H0 707 aa10.48□□□□□ -0.73
ERCC8-201ENST00000265038 CEP126Q9P2H0 1117 aa10.48□□□□□ -0.73
ERCC8-201ENST00000265038 ZNF609O15014 1411 aa10.48□□□□□ -0.73
ERCC8-201ENST00000265038 ZNF280AP59817 542 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-201ENST00000265038 PDE3AQ14432 1141 aa10.48□□□□□ -0.73
ERCC8-201ENST00000265038 RBM26Q5T8P6 1007 aaKnown RBP10.48□□□□□ -0.73
ERCC8-201ENST00000265038 CNTROBQ8N137 903 aa10.48□□□□□ -0.73
ERCC8-201ENST00000265038 SSH3Q8TE77 659 aa10.48□□□□□ -0.73
ERCC8-201ENST00000265038 PGAP2Q9UHJ9 254 aa10.48□□□□□ -0.73
ERCC8-201ENST00000265038 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.48□□□□□ -0.73
ERCC8-201ENST00000265038 SASH1O94885 1247 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 IFIT1P09914 478 aaKnown RBP10.47□□□□□ -0.73
ERCC8-201ENST00000265038 BCAMP50895 628 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 TBC1D10BQ4KMP7 808 aaPredicted RBP10.47□□□□□ -0.73
ERCC8-201ENST00000265038 CEP85Q6P2H3 762 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 CERS5Q8N5B7 392 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.47□□□□□ -0.73
ERCC8-201ENST00000265038 LPIN2Q92539 896 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 ZBTB40Q9NUA8 1239 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 DDX19BQ9UMR2 479 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 JAG2Q9Y219 1238 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 SPEF2Q9C093 1822 aa10.47□□□□□ -0.73
ERCC8-201ENST00000265038 USP17L8P0C7I0 530 aa10.46□□□□□ -0.73
ERCC8-201ENST00000265038 TFCP2Q12800 502 aa10.46□□□□□ -0.73
ERCC8-201ENST00000265038 CAVIN4Q5BKX8 364 aa10.46□□□□□ -0.73
ERCC8-201ENST00000265038 PASKQ96RG2 1323 aa10.46□□□□□ -0.73
ERCC8-201ENST00000265038 SLC5A1P13866 664 aa10.46□□□□□ -0.74
ERCC8-201ENST00000265038 ATP2B3Q16720 1220 aa10.46□□□□□ -0.74
ERCC8-201ENST00000265038 KIF4BQ2VIQ3 1234 aa10.46□□□□□ -0.74
ERCC8-201ENST00000265038 ZC3H15Q8WU90 426 aaKnown RBP10.46□□□□□ -0.74
ERCC8-201ENST00000265038 IQSEC3Q9UPP2 1182 aaPredicted RBP10.46□□□□□ -0.74
ERCC8-201ENST00000265038 FAM205AQ6ZU69 1335 aa10.46□□□□□ -0.74
ERCC8-201ENST00000265038 MYO3BQ8WXR4 1341 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms