RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 H7C1D1 291 aa15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 ECE2O60344 883 aa15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 POLA2Q14181 598 aa15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 ATP2B3Q16720 1220 aa15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 DOK7Q18PE1 504 aa15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 C15orf52Q6ZUT6 534 aaKnown RBP15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 CLASRPQ8N2M8 674 aaKnown RBP15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 KLHDC4Q8TBB5 520 aa15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 CRBNQ96SW2 442 aa15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 PUS3Q9BZE2 481 aaKnown RBP15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 HDAC9Q9UKV0 1011 aa15.45■□□□□ 0.06
CLNS1A-201ENST00000263309 MYO3BQ8WXR4 1341 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 COL11A2P13942 1736 aaPredicted RBP15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 KIAA1551Q9HCM1 1747 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 PNMA6EA0A0J9YXQ4 647 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 USP17L3A6NCW0 530 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 USP17L4A6NCW7 530 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 FZD9O00144 591 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 VEGFAP15692 232 aaPredicted RBP15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 RPS12P25398 132 aaKnown RBP15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 RFX5P48382 616 aaPredicted RBP15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 USP17L1Q7RTZ2 530 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 KIF1BPQ96EK5 621 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 DBNDD1Q9H9R9 158 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 MYH3P11055 1940 aa15.44■□□□□ 0.06
CLNS1A-201ENST00000263309 IFIT2P09913 472 aaKnown RBP15.43■□□□□ 0.06
CLNS1A-201ENST00000263309 TTLL5Q6EMB2 1281 aa15.43■□□□□ 0.06
CLNS1A-201ENST00000263309 PNMA8AQ86V59 439 aaPredicted RBP15.43■□□□□ 0.06
CLNS1A-201ENST00000263309 TBC1D22AQ8WUA7 517 aa15.43■□□□□ 0.06
CLNS1A-201ENST00000263309 GPR108Q9NPR9 543 aa15.43■□□□□ 0.06
CLNS1A-201ENST00000263309 PA2G4Q9UQ80 394 aaKnown RBP15.43■□□□□ 0.06
CLNS1A-201ENST00000263309 NOP58Q9Y2X3 529 aaKnown RBP15.43■□□□□ 0.06
CLNS1A-201ENST00000263309 ZGPATQ8N5A5 531 aaKnown RBP15.42■□□□□ 0.06
CLNS1A-201ENST00000263309 GPATCH3Q96I76 525 aa15.42■□□□□ 0.06
CLNS1A-201ENST00000263309 SEMA3EO15041 775 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 RAD17O75943 681 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 SASH1O94885 1247 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 UQCRFS1P1P0C7P4 283 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 TFCP2Q12800 502 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 STRIP1Q5VSL9 837 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 DNAJC5GQ8N7S2 189 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 GCC1Q96CN9 775 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 LRRCC1Q9C099 1032 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 CD209Q9NNX6 404 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 HACL1Q9UJ83 578 aa15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 BRCA1P38398 1863 aaKnown RBP15.41■□□□□ 0.06
CLNS1A-201ENST00000263309 TOMM70O94826 608 aa15.4■□□□□ 0.06
CLNS1A-201ENST00000263309 APLP1P51693 650 aa15.4■□□□□ 0.06
CLNS1A-201ENST00000263309 TTC39AQ5SRH9 613 aa15.4■□□□□ 0.06
CLNS1A-201ENST00000263309 SPTY2D1Q68D10 685 aaPredicted RBP15.4■□□□□ 0.06
CLNS1A-201ENST00000263309 ATG9AQ7Z3C6 839 aa15.4■□□□□ 0.06
CLNS1A-201ENST00000263309 AGBL3Q8NEM8 1001 aa15.4■□□□□ 0.06
CLNS1A-201ENST00000263309 BCL11AQ9H165 835 aa15.4■□□□□ 0.06
CLNS1A-201ENST00000263309 DENND2AQ9ULE3 1009 aa15.4■□□□□ 0.06
CLNS1A-201ENST00000263309 A0A1B0GUL7 405 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 APBB1O00213 710 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 DDNO94850 711 aaPredicted RBP15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 CXCL9Q07325 125 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 SLF2Q8IX21 1173 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 WDR66Q8TBY9 1149 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 DPF2Q92785 391 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 RRAGCQ9HB90 399 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 CLEC11AQ9Y240 323 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 EXOC6BQ9Y2D4 811 aa15.39■□□□□ 0.05
CLNS1A-201ENST00000263309 CACNA1SQ13698 1873 aa15.38■□□□□ 0.05
CLNS1A-201ENST00000263309 IL1R1P14778 569 aa15.38■□□□□ 0.05
CLNS1A-201ENST00000263309 GYG1P46976 350 aa15.38■□□□□ 0.05
CLNS1A-201ENST00000263309 TIMM10P62072 90 aa15.38■□□□□ 0.05
CLNS1A-201ENST00000263309 GTF2IP78347 998 aa15.38■□□□□ 0.05
CLNS1A-201ENST00000263309 RHPN1Q8TCX5 695 aa15.38■□□□□ 0.05
CLNS1A-201ENST00000263309 MYO1BO43795 1136 aa15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 VIL1P09327 827 aaKnown RBP15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 FKBP1AP62942 108 aaKnown RBP15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 RSBN1LQ6PCB5 846 aaPredicted RBP15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 FBXO33Q7Z6M2 555 aa15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 EXOC6Q8TAG9 804 aa15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 FAM84BQ96KN1 310 aaPredicted RBP15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 GPR101Q96P66 508 aaPredicted RBP15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 NMRK2Q9NPI5 230 aa15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 MAST3O60307 1309 aa15.37■□□□□ 0.05
CLNS1A-201ENST00000263309 PSMD14O00487 310 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 IGSF3O75054 1194 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 USP17L8P0C7I0 530 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 FGFR2P21802 821 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 BCAMP50895 628 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 CHAF1AQ13111 956 aaPredicted RBP15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 TNNI3KQ59H18 835 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 USP50Q70EL3 339 aaPredicted RBP15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 AACSQ86V21 672 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 VGLL2Q8N8G2 317 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 XAGE2Q96GT9 111 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 ADARB2Q9NS39 739 aaKnown RBP15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 CNOT7Q9UIV1 285 aaKnown RBP15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 SUGT1Q9Y2Z0 365 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 FPGT-TNNI3KV9GXZ4 949 aa15.36■□□□□ 0.05
CLNS1A-201ENST00000263309 FER1L6Q2WGJ9 1857 aa15.35■□□□□ 0.05
CLNS1A-201ENST00000263309 RBM5P52756 815 aaKnown RBP eCLIP15.35■□□□□ 0.05
CLNS1A-201ENST00000263309 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
CLNS1A-201ENST00000263309 EAPPQ56P03 285 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms