RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 LUC7LQ9NQ29 371 aaKnown RBP18.57■□□□□ 0.56
SREBF1-201ENST00000261646 WDHD1O75717 1129 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-201ENST00000261646 ZSCAN20P17040 1043 aaPredicted RBP18.57■□□□□ 0.56
SREBF1-201ENST00000261646 RAD21O60216 631 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 SSRP1Q08945 709 aaKnown RBP18.56■□□□□ 0.56
SREBF1-201ENST00000261646 ALDH1L1O75891 902 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 TERF2Q15554 542 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 KCNH5Q8NCM2 988 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 TDRD7Q8NHU6 1098 aaKnown RBP18.56■□□□□ 0.56
SREBF1-201ENST00000261646 USP44Q9H0E7 712 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 SSH2Q76I76 1423 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 EBAG9O00559 213 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 ZBTB3Q9H5J0 574 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 KSR2Q6VAB6 950 aa18.56■□□□□ 0.56
SREBF1-201ENST00000261646 A0A1B0GUL7 405 aa18.55■□□□□ 0.56
SREBF1-201ENST00000261646 NAPBQ9H115 298 aa18.55■□□□□ 0.56
SREBF1-201ENST00000261646 CHMP4BP1P59074 171 aa18.55■□□□□ 0.56
SREBF1-201ENST00000261646 FBXO38Q6PIJ6 1188 aa18.55■□□□□ 0.56
SREBF1-201ENST00000261646 DNAJC21Q5F1R6 531 aaKnown RBP18.55■□□□□ 0.56
SREBF1-201ENST00000261646 AMOTL1Q8IY63 956 aa18.55■□□□□ 0.56
SREBF1-201ENST00000261646 CDK5RAP3Q96JB5 506 aa18.55■□□□□ 0.56
SREBF1-201ENST00000261646 DDX41Q9UJV9 622 aaKnown RBP18.55■□□□□ 0.56
SREBF1-201ENST00000261646 DDIT3P35638 169 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 ANKRD24Q8TF21 1146 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 ZSWIM6Q9HCJ5 1215 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 ATL3Q6DD88 541 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 COPS6Q7L5N1 327 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 TAX1BP1Q86VP1 789 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 PRDM11Q9NQV5 511 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 PIP4K2BP78356 416 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 METTL24Q5JXM2 366 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 MPHOSPH8Q99549 860 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 SPTLC3Q9NUV7 552 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 NDUFB9Q9Y6M9 179 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 FLT4P35916 1363 aa18.54■□□□□ 0.56
SREBF1-201ENST00000261646 LARGE1O95461 756 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 HOXC9P31274 260 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 TMEM67Q5HYA8 995 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 LINS1Q8NG48 757 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 ADCY10Q96PN6 1610 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 USP28Q96RU2 1077 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 GUCA1BQ9UMX6 200 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 PRC1O43663 620 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 ZNF202O95125 648 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 ARID5BQ14865 1188 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 KCNQ3O43525 872 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 KANK3Q6NY19 840 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 CAPZA3Q96KX2 299 aa18.53■□□□□ 0.56
SREBF1-201ENST00000261646 LSG1Q9H089 658 aaKnown RBP18.53■□□□□ 0.56
SREBF1-201ENST00000261646 ARHGAP6O43182 974 aa18.52■□□□□ 0.56
SREBF1-201ENST00000261646 USO1O60763 962 aaKnown RBP18.52■□□□□ 0.56
SREBF1-201ENST00000261646 MICALCLQ6ZW33 695 aa18.52■□□□□ 0.56
SREBF1-201ENST00000261646 XAGE3Q8WTP9 111 aa18.52■□□□□ 0.56
SREBF1-201ENST00000261646 DRC1Q96MC2 740 aa18.52■□□□□ 0.56
SREBF1-201ENST00000261646 CLTCL1P53675 1640 aa18.52■□□□□ 0.56
SREBF1-201ENST00000261646 CCDC196A0A1B0GTZ2 297 aa18.52■□□□□ 0.56
SREBF1-201ENST00000261646 SSH3Q8TE77 659 aa18.52■□□□□ 0.56
SREBF1-201ENST00000261646 BCCIPQ9P287 314 aaKnown RBP eCLIP18.52■□□□□ 0.56
SREBF1-201ENST00000261646 MYO6Q9UM54 1294 aa18.52■□□□□ 0.56
SREBF1-201ENST00000261646 EDC4Q6P2E9 1401 aaKnown RBP18.52■□□□□ 0.56
SREBF1-201ENST00000261646 MINDY4BA8MYZ0 360 aa18.52■□□□□ 0.55
SREBF1-201ENST00000261646 LTKP29376 864 aa18.52■□□□□ 0.55
SREBF1-201ENST00000261646 CABLES1Q8TDN4 633 aa18.52■□□□□ 0.55
SREBF1-201ENST00000261646 STAP2Q9UGK3 403 aa18.52■□□□□ 0.55
SREBF1-201ENST00000261646 AKAP2Q9Y2D5 859 aa18.52■□□□□ 0.55
SREBF1-201ENST00000261646 METP08581 1390 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 ERLIN2O94905 339 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 HLTFQ14527 1009 aaKnown RBP eCLIP18.51■□□□□ 0.55
SREBF1-201ENST00000261646 SYCP1Q15431 976 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 TAF4BQ92750 862 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 EDC3Q96F86 508 aaKnown RBP18.51■□□□□ 0.55
SREBF1-201ENST00000261646 FAM135BQ49AJ0 1406 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 RXRAP19793 462 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 ENOX2Q16206 610 aaKnown RBP18.51■□□□□ 0.55
SREBF1-201ENST00000261646 AMOTQ4VCS5 1084 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 RABEP2Q9H5N1 569 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 SEC31AO94979 1220 aaKnown RBP18.51■□□□□ 0.55
SREBF1-201ENST00000261646 BRAPQ7Z569 592 aa18.51■□□□□ 0.55
SREBF1-201ENST00000261646 C11orf57Q6ZUT1 292 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-201ENST00000261646 BICC1Q9H694 974 aaKnown RBP18.5■□□□□ 0.55
SREBF1-201ENST00000261646 KIAA1468Q9P260 1216 aa18.5■□□□□ 0.55
SREBF1-201ENST00000261646 ZBTB43O43298 467 aa18.5■□□□□ 0.55
SREBF1-201ENST00000261646 MTX1Q13505 466 aa18.5■□□□□ 0.55
SREBF1-201ENST00000261646 ANKRD13DQ6ZTN6 518 aa18.5■□□□□ 0.55
SREBF1-201ENST00000261646 ELP1O95163 1332 aa18.5■□□□□ 0.55
SREBF1-201ENST00000261646 HNRNPH2P55795 449 aaKnown RBP18.5■□□□□ 0.55
SREBF1-201ENST00000261646 CERS3Q8IU89 383 aa18.5■□□□□ 0.55
SREBF1-201ENST00000261646 IL17REQ8NFR9 667 aa18.5■□□□□ 0.55
SREBF1-201ENST00000261646 CDC42BPBQ9Y5S2 1711 aa18.5■□□□□ 0.55
SREBF1-201ENST00000261646 GOLGA6L7A0A1B0GV03 622 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 ATP2C2O75185 946 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 LMBR1LQ6UX01 489 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 DHX58Q96C10 678 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 AKR1B15C9JRZ8 316 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-201ENST00000261646 ZBTB22O15209 634 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 KIF6Q6ZMV9 814 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-201ENST00000261646 GPR161Q8N6U8 529 aaKnown RBP18.49■□□□□ 0.55
SREBF1-201ENST00000261646 TMEM87AQ8NBN3 555 aa18.49■□□□□ 0.55
SREBF1-201ENST00000261646 LLPHQ9BRT6 129 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms