RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 MCM5P33992 734 aa18.47■□□□□ 0.55
RFX1-201ENST00000254325 STK38Q15208 465 aa18.47■□□□□ 0.55
RFX1-201ENST00000254325 NKX1-1Q15270 411 aaPredicted RBP18.47■□□□□ 0.55
RFX1-201ENST00000254325 DSCC1Q9BVC3 393 aa18.47■□□□□ 0.55
RFX1-201ENST00000254325 GNL3LQ9NVN8 582 aaKnown RBP18.47■□□□□ 0.55
RFX1-201ENST00000254325 KINO60870 393 aaKnown RBP18.46■□□□□ 0.55
RFX1-201ENST00000254325 HLFQ16534 295 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 ATG9AQ7Z3C6 839 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 SYNE4Q8N205 404 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 NAPBQ9H115 298 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 HSPD1P10809 573 aaKnown RBP18.46■□□□□ 0.55
RFX1-201ENST00000254325 CKAP2LQ8IYA6 745 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 ISCA1Q9BUE6 129 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 USP25Q9UHP3 1055 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 SH3TC1Q8TE82 1336 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
RFX1-201ENST00000254325 KLF18A0A0U1RQI7 1052 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 NLRP10Q86W26 655 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 CDCA7Q9BWT1 371 aaPredicted RBP18.45■□□□□ 0.54
RFX1-201ENST00000254325 ZMYM1Q5SVZ6 1142 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 TTLL5Q6EMB2 1281 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 APPBP2Q92624 585 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 SDF4Q9BRK5 362 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 RAI14Q9P0K7 980 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 CCDC87Q9NVE4 849 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 PTPDC1A2A3K4 754 aa18.45■□□□□ 0.54
RFX1-201ENST00000254325 SART3Q15020 963 aaKnown RBP18.45■□□□□ 0.54
RFX1-201ENST00000254325 E7EWF7 191 aa18.44■□□□□ 0.54
RFX1-201ENST00000254325 PRC1O43663 620 aa18.44■□□□□ 0.54
RFX1-201ENST00000254325 C8orf76Q96K31 380 aa18.44■□□□□ 0.54
RFX1-201ENST00000254325 NCOA5Q9HCD5 579 aaKnown RBP18.44■□□□□ 0.54
RFX1-201ENST00000254325 FBXO3Q9UK99 471 aa18.44■□□□□ 0.54
RFX1-201ENST00000254325 AKAP17AQ02040 695 aaKnown RBP18.44■□□□□ 0.54
RFX1-201ENST00000254325 GTF3C6Q969F1 213 aa18.44■□□□□ 0.54
RFX1-201ENST00000254325 ZSCAN16Q9H4T2 348 aaPredicted RBP18.44■□□□□ 0.54
RFX1-201ENST00000254325 IQSEC3Q9UPP2 1182 aaPredicted RBP18.44■□□□□ 0.54
RFX1-201ENST00000254325 GPAA1O43292 621 aa18.43■□□□□ 0.54
RFX1-201ENST00000254325 MAST3O60307 1309 aa18.43■□□□□ 0.54
RFX1-201ENST00000254325 COL5A2P05997 1499 aaPredicted RBP18.43■□□□□ 0.54
RFX1-201ENST00000254325 MEX3CQ5U5Q3 659 aaKnown RBP18.43■□□□□ 0.54
RFX1-201ENST00000254325 PI16Q6UXB8 463 aa18.43■□□□□ 0.54
RFX1-201ENST00000254325 ORC3Q9UBD5 711 aaPredicted RBP18.42■□□□□ 0.54
RFX1-201ENST00000254325 CCDC69A6NI79 296 aa18.42■□□□□ 0.54
RFX1-201ENST00000254325 CDC5LQ99459 802 aaKnown RBP18.42■□□□□ 0.54
RFX1-201ENST00000254325 DACT1Q9NYF0 836 aa18.42■□□□□ 0.54
RFX1-201ENST00000254325 TAF6LQ9Y6J9 622 aa18.42■□□□□ 0.54
RFX1-201ENST00000254325 CLCN1P35523 988 aa18.42■□□□□ 0.54
RFX1-201ENST00000254325 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.42■□□□□ 0.54
RFX1-201ENST00000254325 SPC24Q8NBT2 197 aa18.42■□□□□ 0.54
RFX1-201ENST00000254325 SMARCC1Q92922 1105 aaPredicted RBP18.42■□□□□ 0.54
RFX1-201ENST00000254325 PUM3Q15397 648 aaKnown RBP18.41■□□□□ 0.54
RFX1-201ENST00000254325 IL6STP40189 918 aaPredicted RBP18.41■□□□□ 0.54
RFX1-201ENST00000254325 DDX19AQ9NUU7 478 aaKnown RBP18.41■□□□□ 0.54
RFX1-201ENST00000254325 CASP7P55210 303 aa18.41■□□□□ 0.54
RFX1-201ENST00000254325 SAFBQ15424 915 aaKnown RBP eCLIP18.41■□□□□ 0.54
RFX1-201ENST00000254325 TTLL11Q8NHH1 800 aa18.41■□□□□ 0.54
RFX1-201ENST00000254325 MED23Q9ULK4 1368 aa18.41■□□□□ 0.54
RFX1-201ENST00000254325 CDKL5O76039 1030 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 TOB2Q14106 344 aaPredicted RBP18.4■□□□□ 0.54
RFX1-201ENST00000254325 C8orf37Q96NL8 207 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 KDM3BQ7LBC6 1761 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 M0R2C6 588 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 CCDC144CPQ8IYA2 1237 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 OSBP2Q969R2 916 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 TRIM5Q9C035 493 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 CYP19A1P11511 503 aaPredicted RBP18.4■□□□□ 0.54
RFX1-201ENST00000254325 TRIM28Q13263 835 aaKnown RBP18.4■□□□□ 0.54
RFX1-201ENST00000254325 LRP10Q7Z4F1 713 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 MICU3Q86XE3 530 aa18.4■□□□□ 0.54
RFX1-201ENST00000254325 MINDY4BA8MYZ0 360 aa18.39■□□□□ 0.53
RFX1-201ENST00000254325 MAGEB6Q8N7X4 407 aa18.39■□□□□ 0.53
RFX1-201ENST00000254325 ZNF609O15014 1411 aa18.39■□□□□ 0.53
RFX1-201ENST00000254325 POLR3DP05423 398 aaPredicted RBP18.39■□□□□ 0.53
RFX1-201ENST00000254325 CHAF1AQ13111 956 aaPredicted RBP18.39■□□□□ 0.53
RFX1-201ENST00000254325 NUP133Q8WUM0 1156 aa18.39■□□□□ 0.53
RFX1-201ENST00000254325 LPIN2Q92539 896 aa18.39■□□□□ 0.53
RFX1-201ENST00000254325 TOM1O60784 492 aa18.39■□□□□ 0.53
RFX1-201ENST00000254325 RPAP1Q9BWH6 1393 aaPredicted RBP18.39■□□□□ 0.53
RFX1-201ENST00000254325 IFIT3O14879 490 aaKnown RBP18.38■□□□□ 0.53
RFX1-201ENST00000254325 PARP10Q53GL7 1025 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 CAVIN4Q5BKX8 364 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 LLPHQ9BRT6 129 aaKnown RBP18.38■□□□□ 0.53
RFX1-201ENST00000254325 RGPD5Q99666 1765 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 LOC102724428A0A0B4J2F2 783 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 PDE8BO95263 885 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 ADCY5O95622 1261 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 SIK1P57059 783 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 UVSSAQ2YD98 709 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 ZPR1O75312 459 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 FGAP02671 866 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
RFX1-201ENST00000254325 TMEM67Q5HYA8 995 aa18.38■□□□□ 0.53
RFX1-201ENST00000254325 TPM4P67936 248 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 CCDC102BQ68D86 513 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 R3HCC1Q9Y3T6 440 aaKnown RBP18.37■□□□□ 0.53
RFX1-201ENST00000254325 PHKA1P46020 1223 aa18.37■□□□□ 0.53
RFX1-201ENST00000254325 METAP2P50579 478 aaKnown RBP eCLIP18.37■□□□□ 0.53
RFX1-201ENST00000254325 SCRN1Q12765 414 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms