RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PNOCQ13519 176 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 EDC3Q96F86 508 aaKnown RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 CEP85Q6P2H3 762 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 SYCP3Q8IZU3 236 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 EIF4E1BA6NMX2 242 aaKnown RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 CMTR1Q8N1G2 835 aaKnown RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 GIGYF2Q6Y7W6 1299 aaKnown RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 KLHL7Q8IXQ5 586 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 CATIPQ7Z7H3 387 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 BAG1Q99933 345 aaPredicted RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 ANKIB1Q9P2G1 1089 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 ZNF215Q9UL58 517 aaPredicted RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 SLC4A4Q9Y6R1 1079 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 WDHD1O75717 1129 aaPredicted RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 SNX14Q9Y5W7 946 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 GCOM1H8Y6P7 765 aaPredicted RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 MYZAPP0CAP1 466 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 UBA7P41226 1012 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 ANKRD18AQ8IVF6 992 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 LRRC59Q96AG4 307 aaKnown RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 PPP1R12CQ9BZL4 782 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 ZMYND10O75800 440 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 IGHMBP2P38935 993 aaKnown RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 TBC1D7Q9P0N9 293 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 ZNF827Q17R98 1081 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 EBAG9O00559 213 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 FBF1Q8TES7 1133 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 MCM3P25205 808 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 XAGE3Q8WTP9 111 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 PALD1Q9ULE6 856 aa8.54□□□□□ -1.04
RIF1-201ENST00000243326 DZIP1Q86YF9 867 aaKnown RBP8.54□□□□□ -1.04
RIF1-201ENST00000243326 FANCCQ00597 558 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 PICALMQ13492 652 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 ZBTB43O43298 467 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 BLZF1Q9H2G9 400 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 EEF2P13639 858 aaKnown RBP8.53□□□□□ -1.04
RIF1-201ENST00000243326 TRIM68Q6AZZ1 485 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 CCDC63Q8NA47 563 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 CARD14Q9BXL6 1004 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 CCDC122Q5T0U0 273 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 KDM2BQ8NHM5 1336 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 VWA3AA6NCI4 1184 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 BUB1BO60566 1050 aaPredicted RBP8.53□□□□□ -1.04
RIF1-201ENST00000243326 MRPS25P82663 173 aaKnown RBP8.53□□□□□ -1.04
RIF1-201ENST00000243326 CCDC50Q8IVM0 306 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 CRACR2BQ8N4Y2 399 aaPredicted RBP8.53□□□□□ -1.04
RIF1-201ENST00000243326 PPANQ9NQ55 473 aaKnown RBP8.53□□□□□ -1.04
RIF1-201ENST00000243326 HOMER2Q9NSB8 354 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 ZNF594Q96JF6 807 aaPredicted RBP8.53□□□□□ -1.04
RIF1-201ENST00000243326 ACSBG1Q96GR2 724 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 FAM212AQ96EL1 285 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 TOP2BQ02880 1626 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 SAP30BPQ9UHR5 308 aaKnown RBP8.53□□□□□ -1.04
RIF1-201ENST00000243326 RUFY3Q7L099 469 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 CABP5Q9NP86 173 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 FAM135AQ9P2D6 1515 aa8.53□□□□□ -1.04
RIF1-201ENST00000243326 IVLP07476 585 aa8.52□□□□□ -1.04
RIF1-201ENST00000243326 ZBTB16Q05516 673 aa8.52□□□□□ -1.04
RIF1-201ENST00000243326 NAA30Q147X3 362 aaPredicted RBP8.52□□□□□ -1.04
RIF1-201ENST00000243326 WTAPQ15007 396 aa8.52□□□□□ -1.04
RIF1-201ENST00000243326 EEF2KMTQ96G04 330 aa8.52□□□□□ -1.04
RIF1-201ENST00000243326 KIAA0753Q2KHM9 967 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 MFSD6Q6ZSS7 791 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 RAD50Q92878 1312 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 PDE1CQ14123 709 aaPredicted RBP8.52□□□□□ -1.05
RIF1-201ENST00000243326 CALML4Q96GE6 196 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 ERO1AQ96HE7 468 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 PHKBQ93100 1093 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 SAMM50Q9Y512 469 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 NCOA7Q8NI08 942 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 TAB2Q9NYJ8 693 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 NSFL1CQ9UNZ2 370 aaKnown RBP8.52□□□□□ -1.05
RIF1-201ENST00000243326 CEP83Q9Y592 693 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 TSPY2A6NKD2 308 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 PIP4K2BP78356 416 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 HDXQ7Z353 690 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 TBC1D31Q96DN5 1066 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 SEPT14Q6ZU15 432 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 RAPGEF1Q13905 1077 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 PRDM11Q9NQV5 511 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 EPRSP07814 1512 aaKnown RBP8.52□□□□□ -1.05
RIF1-201ENST00000243326 KIF20AO95235 890 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 CFAP58Q5T655 872 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 GSTA5Q7RTV2 222 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 HOOK3Q86VS8 718 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 KRI1Q8N9T8 703 aaKnown RBP8.52□□□□□ -1.05
RIF1-201ENST00000243326 SP4Q02446 784 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 KAT14Q9H8E8 782 aa8.52□□□□□ -1.05
RIF1-201ENST00000243326 TPX2Q9ULW0 747 aaKnown RBP8.52□□□□□ -1.05
RIF1-201ENST00000243326 SLC5A1P13866 664 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 NAA15Q9BXJ9 866 aaKnown RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 POLR2DO15514 142 aaKnown RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 CLSTN2Q9H4D0 955 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 RPSAP08865 295 aaKnown RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 CYP7A1P22680 504 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 SPECC1LQ69YQ0 1117 aa8.51□□□□□ -1.05
RIF1-201ENST00000243326 CKAP4Q07065 602 aaKnown RBP8.51□□□□□ -1.05
RIF1-201ENST00000243326 ADAT2Q7Z6V5 191 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms