RNA–Protein interactions for RNA: ENST00000230461.10

TMEM30A-201, Transcript of transmembrane protein 30A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM30A, Length 4,594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM30A-201ENST00000230461 MBD4O95243 580 aa18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 ZSCAN22P10073 491 aaPredicted RBP18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 NLRP5P59047 1200 aa18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 CEP57L1Q8IYX8 460 aa18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 LRRC7Q96NW7 1537 aa18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 TMEM131LA2VDJ0 1609 aa18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 CCDC129Q6ZRS4 1044 aa18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 CCAR1Q8IX12 1150 aaKnown RBP18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 NDUFB9Q9Y6M9 179 aa18.38■□□□□ 0.53
TMEM30A-201ENST00000230461 RPS8P62241 208 aaKnown RBP18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 VSIG10Q8N0Z9 540 aa18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 DACH1Q9UI36 760 aa18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 CEP170BQ9Y4F5 1589 aaPredicted RBP18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 PLCG2P16885 1265 aa18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 JAG2Q9Y219 1238 aa18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 CCDC173Q0VFZ6 552 aa18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 ZSCAN16Q9H4T2 348 aaPredicted RBP18.37■□□□□ 0.53
TMEM30A-201ENST00000230461 RIMBP2O15034 1052 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 UFL1O94874 794 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 FILIP1LQ4L180 1135 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 CCDC194A0A1B0GVG4 234 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 CCDC183Q5T5S1 534 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 CHST3Q7LGC8 479 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 HOMER1Q86YM7 354 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 MCM9Q9NXL9 1143 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 CCDC178Q5BJE1 867 aa18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 INTS4Q96HW7 963 aaKnown RBP18.36■□□□□ 0.53
TMEM30A-201ENST00000230461 OGFOD1Q8N543 542 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 CABP5Q9NP86 173 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 MYO3AQ8NEV4 1616 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 TSPY3P0CV98 308 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 TSPY8P0CW00 308 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 ZAP70P43403 619 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 CAMK4Q16566 473 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 RTN1Q16799 776 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 ZNF592Q92610 1267 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 CEP89Q96ST8 783 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 ZNF76P36508 570 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 STIM1Q13586 685 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 PDILTQ8N807 584 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 DIP2AQ14689 1571 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 CPA1P15085 419 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 MROH1Q8NDA8 1641 aa18.35■□□□□ 0.53
TMEM30A-201ENST00000230461 GPAA1O43292 621 aa18.34■□□□□ 0.53
TMEM30A-201ENST00000230461 SIRT2Q8IXJ6 389 aa18.34■□□□□ 0.53
TMEM30A-201ENST00000230461 EDC3Q96F86 508 aaKnown RBP18.34■□□□□ 0.53
TMEM30A-201ENST00000230461 LRRC24Q50LG9 513 aa18.34■□□□□ 0.53
TMEM30A-201ENST00000230461 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
TMEM30A-201ENST00000230461 SLC27A2O14975 620 aa18.34■□□□□ 0.53
TMEM30A-201ENST00000230461 BMP2KQ9NSY1 1161 aaPredicted RBP18.34■□□□□ 0.53
TMEM30A-201ENST00000230461 FAM182BQ5T319 152 aa18.33■□□□□ 0.53
TMEM30A-201ENST00000230461 STAP2Q9UGK3 403 aa18.33■□□□□ 0.53
TMEM30A-201ENST00000230461 EPB41L2O43491 1005 aaKnown RBP18.33■□□□□ 0.53
TMEM30A-201ENST00000230461 POLD1P28340 1107 aa18.33■□□□□ 0.53
TMEM30A-201ENST00000230461 CCDC12Q8WUD4 166 aaPredicted RBP18.33■□□□□ 0.53
TMEM30A-201ENST00000230461 MAGEC2Q9UBF1 373 aaPredicted RBP18.33■□□□□ 0.53
TMEM30A-201ENST00000230461 HDAC9Q9UKV0 1011 aa18.33■□□□□ 0.53
TMEM30A-201ENST00000230461 SNX14Q9Y5W7 946 aa18.33■□□□□ 0.53
TMEM30A-201ENST00000230461 SSBP05455 408 aaKnown RBP eCLIP18.33■□□□□ 0.52
TMEM30A-201ENST00000230461 APOBRQ0VD83 1088 aa18.33■□□□□ 0.52
TMEM30A-201ENST00000230461 ALG1Q9BT22 464 aa18.33■□□□□ 0.52
TMEM30A-201ENST00000230461 VAT1LQ9HCJ6 419 aa18.33■□□□□ 0.52
TMEM30A-201ENST00000230461 MYO1BO43795 1136 aa18.33■□□□□ 0.52
TMEM30A-201ENST00000230461 SERPINC1P01008 464 aa18.33■□□□□ 0.52
TMEM30A-201ENST00000230461 USPL1Q5W0Q7 1092 aa18.33■□□□□ 0.52
TMEM30A-201ENST00000230461 SPATA5Q8NB90 893 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 PICALMQ13492 652 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 FAM196AQ6ZSG2 479 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 GREM2Q9H772 168 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 EPS15P42566 896 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 FSIP1Q8NA03 581 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 ZHX3Q9H4I2 956 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 DDX19AQ9NUU7 478 aaKnown RBP18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 RIMS1Q86UR5 1692 aaKnown RBP18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 GNAQP50148 359 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 UBE2HP62256 183 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
TMEM30A-201ENST00000230461 OSBPL3Q9H4L5 887 aa18.31■□□□□ 0.52
TMEM30A-201ENST00000230461 KLHL40Q2TBA0 621 aa18.31■□□□□ 0.52
TMEM30A-201ENST00000230461 WDR66Q8TBY9 1149 aa18.31■□□□□ 0.52
TMEM30A-201ENST00000230461 MROH2AA6NES4 1674 aa18.31■□□□□ 0.52
TMEM30A-201ENST00000230461 ERVV-1B6SEH8 477 aa18.31■□□□□ 0.52
TMEM30A-201ENST00000230461 RPS6KB1P23443 525 aa18.3■□□□□ 0.52
TMEM30A-201ENST00000230461 SPC24Q8NBT2 197 aa18.3■□□□□ 0.52
TMEM30A-201ENST00000230461 ARMT1Q9H993 441 aa18.3■□□□□ 0.52
TMEM30A-201ENST00000230461 HSPA4P34932 840 aa18.3■□□□□ 0.52
TMEM30A-201ENST00000230461 NLRP10Q86W26 655 aa18.3■□□□□ 0.52
TMEM30A-201ENST00000230461 FEZ1Q99689 392 aa18.3■□□□□ 0.52
TMEM30A-201ENST00000230461 RICTORQ6R327 1708 aa18.3■□□□□ 0.52
TMEM30A-201ENST00000230461 PPLO60437 1756 aa18.3■□□□□ 0.52
TMEM30A-201ENST00000230461 CTAGE5O15320 804 aa18.29■□□□□ 0.52
TMEM30A-201ENST00000230461 F13A1P00488 732 aa18.29■□□□□ 0.52
TMEM30A-201ENST00000230461 CCAR2Q8N163 923 aaKnown RBP18.29■□□□□ 0.52
TMEM30A-201ENST00000230461 FLAD1Q8NFF5 587 aa18.29■□□□□ 0.52
TMEM30A-201ENST00000230461 PUS3Q9BZE2 481 aaKnown RBP18.29■□□□□ 0.52
TMEM30A-201ENST00000230461 ATG3Q9NT62 314 aa18.29■□□□□ 0.52
TMEM30A-201ENST00000230461 KCNQ4P56696 695 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms