RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 POLA2Q14181 598 aa18.24■□□□□ 0.51
PCOLCE-201ENST00000223061 TNIP1Q15025 636 aa18.24■□□□□ 0.51
PCOLCE-201ENST00000223061 IRS2Q9Y4H2 1338 aa18.24■□□□□ 0.51
PCOLCE-201ENST00000223061 SSH3Q8TE77 659 aa18.23■□□□□ 0.51
PCOLCE-201ENST00000223061 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
PCOLCE-201ENST00000223061 CEP126Q9P2H0 1117 aa18.23■□□□□ 0.51
PCOLCE-201ENST00000223061 PSMD14O00487 310 aa18.23■□□□□ 0.51
PCOLCE-201ENST00000223061 PUM3Q15397 648 aaKnown RBP18.23■□□□□ 0.51
PCOLCE-201ENST00000223061 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
PCOLCE-201ENST00000223061 A0A1B0GUL6 1792 aa18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 POTECB2RU33 542 aa18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 KIF3CO14782 793 aa18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 VEGFAP15692 232 aaPredicted RBP18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 C15orf52Q6ZUT6 534 aaKnown RBP18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 ZNF804AQ7Z570 1209 aa18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 PODNQ7Z5L7 613 aa18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 FBXW7Q969H0 707 aa18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 L3MBTL3Q96JM7 780 aaPredicted RBP18.22■□□□□ 0.51
PCOLCE-201ENST00000223061 GYG1P46976 350 aa18.21■□□□□ 0.51
PCOLCE-201ENST00000223061 GMPSP49915 693 aaPredicted RBP18.21■□□□□ 0.51
PCOLCE-201ENST00000223061 G3BP1Q13283 466 aaKnown RBP eCLIP18.21■□□□□ 0.51
PCOLCE-201ENST00000223061 OS9Q13438 667 aaPredicted RBP18.21■□□□□ 0.51
PCOLCE-201ENST00000223061 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
PCOLCE-201ENST00000223061 SURF6O75683 361 aaKnown RBP18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 TFCP2Q12800 502 aa18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 CD209Q9NNX6 404 aa18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 IQCA1LA6NCM1 817 aa18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 IFIT1P09914 478 aaKnown RBP18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 FGFR2P21802 821 aa18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 SCNN1DP51172 638 aa18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 ATP2B3Q16720 1220 aa18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 C16orf71Q8IYS4 520 aaPredicted RBP18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 HACL1Q9UJ83 578 aa18.2■□□□□ 0.5
PCOLCE-201ENST00000223061 WDR90Q96KV7 1748 aa18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 USP17L3A6NCW0 530 aa18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 USP17L4A6NCW7 530 aa18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 SLC5A1P13866 664 aa18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 HIBADHP31937 336 aaKnown RBP18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 USP17L1Q7RTZ2 530 aa18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 LPIN2Q92539 896 aa18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 FAM84BQ96KN1 310 aaPredicted RBP18.19■□□□□ 0.5
PCOLCE-201ENST00000223061 VPS37DQ86XT2 251 aa18.18■□□□□ 0.5
PCOLCE-201ENST00000223061 SIRT2Q8IXJ6 389 aa18.18■□□□□ 0.5
PCOLCE-201ENST00000223061 HMMRO75330 724 aa18.18■□□□□ 0.5
PCOLCE-201ENST00000223061 VIL1P09327 827 aaKnown RBP18.18■□□□□ 0.5
PCOLCE-201ENST00000223061 CAVIN4Q5BKX8 364 aa18.18■□□□□ 0.5
PCOLCE-201ENST00000223061 MXD3Q9BW11 206 aa18.18■□□□□ 0.5
PCOLCE-201ENST00000223061 TAF1DQ9H5J8 278 aaPredicted RBP18.18■□□□□ 0.5
PCOLCE-201ENST00000223061 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.18■□□□□ 0.5
PCOLCE-201ENST00000223061 SASH1O94885 1247 aa18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 EPHX2P34913 555 aa18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 EPS15P42566 896 aa18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 BCAMP50895 628 aa18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 GTF2IP78347 998 aa18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 RSBN1LQ6PCB5 846 aaPredicted RBP18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 JAG2Q9Y219 1238 aa18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 EXOC6BQ9Y2D4 811 aa18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 NOP58Q9Y2X3 529 aaKnown RBP18.17■□□□□ 0.5
PCOLCE-201ENST00000223061 SHTN1A0MZ66 631 aa18.16■□□□□ 0.5
PCOLCE-201ENST00000223061 IL1R1P14778 569 aa18.16■□□□□ 0.5
PCOLCE-201ENST00000223061 TTLL5Q6EMB2 1281 aa18.16■□□□□ 0.5
PCOLCE-201ENST00000223061 FBXO33Q7Z6M2 555 aa18.16■□□□□ 0.5
PCOLCE-201ENST00000223061 IQSEC3Q9UPP2 1182 aaPredicted RBP18.16■□□□□ 0.5
PCOLCE-201ENST00000223061 TIMM10P62072 90 aa18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 EAPPQ56P03 285 aaPredicted RBP18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 DACT2Q5SW24 774 aa18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 STRIP1Q5VSL9 837 aa18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 CNOT7Q9UIV1 285 aaKnown RBP18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 AKAP2Q9Y2D5 859 aa18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 RPS12P25398 132 aaKnown RBP18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 ADORA1P30542 326 aa18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 MICALL2Q8IY33 904 aa18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 TDRD7Q8NHU6 1098 aaKnown RBP18.15■□□□□ 0.5
PCOLCE-201ENST00000223061 A0A1B0GUL7 405 aa18.14■□□□□ 0.49
PCOLCE-201ENST00000223061 FRAT2O75474 233 aaPredicted RBP18.14■□□□□ 0.49
PCOLCE-201ENST00000223061 NEUROD6Q96NK8 337 aa18.14■□□□□ 0.49
PCOLCE-201ENST00000223061 APBB1O00213 710 aa18.13■□□□□ 0.49
PCOLCE-201ENST00000223061 TOMM70O94826 608 aa18.13■□□□□ 0.49
PCOLCE-201ENST00000223061 POTEIP0CG38 1075 aa18.13■□□□□ 0.49
PCOLCE-201ENST00000223061 POTEJP0CG39 1038 aa18.13■□□□□ 0.49
PCOLCE-201ENST00000223061 DPF2Q92785 391 aa18.13■□□□□ 0.49
PCOLCE-201ENST00000223061 H7C1D1 291 aa18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 CHAF1AQ13111 956 aaPredicted RBP18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 AGBL3Q8NEM8 1001 aa18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 ADARB2Q9NS39 739 aaKnown RBP18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 PHKA1P46020 1223 aa18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 PNMA8AQ86V59 439 aaPredicted RBP18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 XAGE2Q96GT9 111 aa18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 GMLQ99445 158 aa18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 PCDHB15Q9Y5E8 787 aa18.12■□□□□ 0.49
PCOLCE-201ENST00000223061 ZNF609O15014 1411 aa18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 HSP90AB4PQ58FF6 505 aa18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 TNNI3KQ59H18 835 aa18.11■□□□□ 0.49
PCOLCE-201ENST00000223061 SAMD7Q7Z3H4 446 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms