RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 ZNF594Q96JF6 807 aaPredicted RBP20.4■□□□□ 0.86
LIM2-201ENST00000221973 ADARB2Q9NS39 739 aaKnown RBP20.4■□□□□ 0.86
LIM2-201ENST00000221973 CIAPIN1Q6FI81 312 aa20.39■□□□□ 0.85
LIM2-201ENST00000221973 KLHDC4Q8TBB5 520 aa20.39■□□□□ 0.85
LIM2-201ENST00000221973 CDC5LQ99459 802 aaKnown RBP20.39■□□□□ 0.85
LIM2-201ENST00000221973 WBP1LQ9NX94 342 aa20.39■□□□□ 0.85
LIM2-201ENST00000221973 SHTN1A0MZ66 631 aa20.38■□□□□ 0.85
LIM2-201ENST00000221973 RFX5P48382 616 aaPredicted RBP20.38■□□□□ 0.85
LIM2-201ENST00000221973 HIRAP54198 1017 aaPredicted RBP20.38■□□□□ 0.85
LIM2-201ENST00000221973 POLA2Q14181 598 aa20.38■□□□□ 0.85
LIM2-201ENST00000221973 ANKRD18AQ8IVF6 992 aa20.38■□□□□ 0.85
LIM2-201ENST00000221973 SSH3Q8TE77 659 aa20.38■□□□□ 0.85
LIM2-201ENST00000221973 POLLQ9UGP5 575 aa20.38■□□□□ 0.85
LIM2-201ENST00000221973 PGAP2Q9UHJ9 254 aa20.38■□□□□ 0.85
LIM2-201ENST00000221973 PA2G4Q9UQ80 394 aaKnown RBP20.38■□□□□ 0.85
LIM2-201ENST00000221973 TRPM7Q96QT4 1865 aa20.38■□□□□ 0.85
LIM2-201ENST00000221973 HMMRO75330 724 aa20.37■□□□□ 0.85
LIM2-201ENST00000221973 RPS8P62241 208 aaKnown RBP20.37■□□□□ 0.85
LIM2-201ENST00000221973 GPSM2P81274 684 aa20.37■□□□□ 0.85
LIM2-201ENST00000221973 IGHMBP2P38935 993 aaKnown RBP20.36■□□□□ 0.85
LIM2-201ENST00000221973 PTPN12Q05209 780 aaKnown RBP20.36■□□□□ 0.85
LIM2-201ENST00000221973 TNIP1Q15025 636 aa20.36■□□□□ 0.85
LIM2-201ENST00000221973 TRPM4Q8TD43 1214 aa20.36■□□□□ 0.85
LIM2-201ENST00000221973 ABT1Q9ULW3 272 aaKnown RBP20.36■□□□□ 0.85
LIM2-201ENST00000221973 NSFL1CQ9UNZ2 370 aaKnown RBP20.36■□□□□ 0.85
LIM2-201ENST00000221973 WDR33Q9C0J8 1336 aaKnown RBP20.35■□□□□ 0.85
LIM2-201ENST00000221973 WASHC4Q2M389 1173 aa20.35■□□□□ 0.85
LIM2-201ENST00000221973 MPHOSPH8Q99549 860 aa20.35■□□□□ 0.85
LIM2-201ENST00000221973 SIL1Q9H173 461 aa20.35■□□□□ 0.85
LIM2-201ENST00000221973 THSD7BQ9C0I4 1608 aa20.35■□□□□ 0.85
LIM2-201ENST00000221973 CAPN15O75808 1086 aa20.34■□□□□ 0.85
LIM2-201ENST00000221973 LDHAL6AQ6ZMR3 332 aa20.34■□□□□ 0.85
LIM2-201ENST00000221973 PUS3Q9BZE2 481 aaKnown RBP20.34■□□□□ 0.85
LIM2-201ENST00000221973 DBNDD1Q9H9R9 158 aa20.34■□□□□ 0.85
LIM2-201ENST00000221973 COPRSQ9NQ92 184 aa20.34■□□□□ 0.85
LIM2-201ENST00000221973 KCNQ5Q9NR82 932 aa20.34■□□□□ 0.85
LIM2-201ENST00000221973 CNOT7Q9UIV1 285 aaKnown RBP20.34■□□□□ 0.85
LIM2-201ENST00000221973 ZBTB12Q9Y330 459 aaPredicted RBP20.34■□□□□ 0.85
LIM2-201ENST00000221973 MYH3P11055 1940 aa20.33■□□□□ 0.85
LIM2-201ENST00000221973 PSMD14O00487 310 aa20.33■□□□□ 0.85
LIM2-201ENST00000221973 SURF6O75683 361 aaKnown RBP20.33■□□□□ 0.85
LIM2-201ENST00000221973 LRRC24Q50LG9 513 aa20.33■□□□□ 0.85
LIM2-201ENST00000221973 TBC1D16Q8TBP0 767 aa20.33■□□□□ 0.85
LIM2-201ENST00000221973 GPR101Q96P66 508 aaPredicted RBP20.33■□□□□ 0.85
LIM2-201ENST00000221973 GLIS2Q9BZE0 524 aaPredicted RBP20.33■□□□□ 0.85
LIM2-201ENST00000221973 PRDM10Q9NQV6 1147 aa20.33■□□□□ 0.85
LIM2-201ENST00000221973 CNNM1Q9NRU3 951 aa20.33■□□□□ 0.85
LIM2-201ENST00000221973 TLL2Q9Y6L7 1015 aa20.33■□□□□ 0.85
LIM2-201ENST00000221973 RIMBP2O15034 1052 aa20.32■□□□□ 0.84
LIM2-201ENST00000221973 ERICH6BQ5W0A0 696 aa20.32■□□□□ 0.84
LIM2-201ENST00000221973 ZC3H15Q8WU90 426 aaKnown RBP20.32■□□□□ 0.84
LIM2-201ENST00000221973 BSDC1Q9NW68 430 aaPredicted RBP20.32■□□□□ 0.84
LIM2-201ENST00000221973 C6orf229H3BNL8 230 aa20.31■□□□□ 0.84
LIM2-201ENST00000221973 EYA2O00167 538 aa20.31■□□□□ 0.84
LIM2-201ENST00000221973 CTCFP49711 727 aaPredicted RBP20.31■□□□□ 0.84
LIM2-201ENST00000221973 G3BP1Q13283 466 aaKnown RBP eCLIP20.31■□□□□ 0.84
LIM2-201ENST00000221973 HDAC1Q13547 482 aaPredicted RBP20.31■□□□□ 0.84
LIM2-201ENST00000221973 MICALL2Q8IY33 904 aa20.31■□□□□ 0.84
LIM2-201ENST00000221973 DPF2Q92785 391 aa20.31■□□□□ 0.84
LIM2-201ENST00000221973 CAPNS2Q96L46 248 aa20.31■□□□□ 0.84
LIM2-201ENST00000221973 RWDD1Q9H446 243 aaPredicted RBP20.31■□□□□ 0.84
LIM2-201ENST00000221973 PODXL2Q9NZ53 605 aa20.31■□□□□ 0.84
LIM2-201ENST00000221973 EXOC6BQ9Y2D4 811 aa20.31■□□□□ 0.84
LIM2-201ENST00000221973 SCN9AQ15858 1988 aa20.31■□□□□ 0.84
LIM2-201ENST00000221973 EGFRP00533 1210 aa20.3■□□□□ 0.84
LIM2-201ENST00000221973 IGHDP01880 384 aa20.3■□□□□ 0.84
LIM2-201ENST00000221973 OS9Q13438 667 aaPredicted RBP20.3■□□□□ 0.84
LIM2-201ENST00000221973 DOK7Q18PE1 504 aa20.3■□□□□ 0.84
LIM2-201ENST00000221973 CYP4F22Q6NT55 531 aa20.3■□□□□ 0.84
LIM2-201ENST00000221973 ECE2O60344 883 aa20.29■□□□□ 0.84
LIM2-201ENST00000221973 HSPA8P11142 646 aaKnown RBP20.29■□□□□ 0.84
LIM2-201ENST00000221973 LBX1P52954 281 aa20.29■□□□□ 0.84
LIM2-201ENST00000221973 ATG9AQ7Z3C6 839 aa20.29■□□□□ 0.84
LIM2-201ENST00000221973 SAMD7Q7Z3H4 446 aa20.29■□□□□ 0.84
LIM2-201ENST00000221973 SAPCD2Q86UD0 394 aa20.29■□□□□ 0.84
LIM2-201ENST00000221973 AIDAQ96BJ3 306 aa20.29■□□□□ 0.84
LIM2-201ENST00000221973 NOP58Q9Y2X3 529 aaKnown RBP20.29■□□□□ 0.84
LIM2-201ENST00000221973 RIPOR2Q9Y4F9 1068 aa20.29■□□□□ 0.84
LIM2-201ENST00000221973 APBB1O00213 710 aa20.28■□□□□ 0.84
LIM2-201ENST00000221973 CIAO1O76071 339 aa20.28■□□□□ 0.84
LIM2-201ENST00000221973 CELF2O95319 508 aaKnown RBP20.28■□□□□ 0.84
LIM2-201ENST00000221973 DLK2Q6UY11 383 aa20.28■□□□□ 0.84
LIM2-201ENST00000221973 FBXO3Q9UK99 471 aa20.28■□□□□ 0.84
LIM2-201ENST00000221973 MINPP1Q9UNW1 487 aa20.28■□□□□ 0.84
LIM2-201ENST00000221973 H7C1D1 291 aa20.27■□□□□ 0.84
LIM2-201ENST00000221973 IL15P40933 162 aaPredicted RBP20.27■□□□□ 0.84
LIM2-201ENST00000221973 MAP2K1Q02750 393 aaPredicted RBP20.27■□□□□ 0.84
LIM2-201ENST00000221973 CHRNDQ07001 517 aa20.27■□□□□ 0.84
LIM2-201ENST00000221973 METTL24Q5JXM2 366 aa20.27■□□□□ 0.84
LIM2-201ENST00000221973 HELBQ8NG08 1087 aaPredicted RBP20.27■□□□□ 0.84
LIM2-201ENST00000221973 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.84
LIM2-201ENST00000221973 EYA3Q99504 573 aa20.27■□□□□ 0.84
LIM2-201ENST00000221973 DCTPP1Q9H773 170 aa20.27■□□□□ 0.84
LIM2-201ENST00000221973 PPP4R2Q9NY27 417 aa20.27■□□□□ 0.84
LIM2-201ENST00000221973 HSP90AB4PQ58FF6 505 aa20.26■□□□□ 0.83
LIM2-201ENST00000221973 CDC37L1Q7L3B6 337 aa20.26■□□□□ 0.83
LIM2-201ENST00000221973 MROH5Q6ZUA9 1318 aa20.26■□□□□ 0.83
LIM2-201ENST00000221973 WTIPA6NIX2 430 aaPredicted RBP20.25■□□□□ 0.83
LIM2-201ENST00000221973 AOC2O75106 756 aa20.25■□□□□ 0.83
LIM2-201ENST00000221973 UFL1O94874 794 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms