RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 CCDC171Q6TFL3 1326 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 ALDH1B1P30837 517 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 WDR66Q8TBY9 1149 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 TNNI3KQ59H18 835 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 FPGT-TNNI3KV9GXZ4 949 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 PATL2C9JE40 543 aaKnown RBP12.73□□□□□ -0.37
RGPD5-201ENST00000016946 CALML3P27482 149 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 IQCEQ6IPM2 695 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 METP08581 1390 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 TBC1D32Q96NH3 1257 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 SKIDA1Q1XH10 827 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
RGPD5-201ENST00000016946 CCDC112Q8NEF3 446 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 DBNDD2Q9BQY9 259 aa12.73□□□□□ -0.37
RGPD5-201ENST00000016946 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 BICD1Q96G01 975 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 XAGE2Q96GT9 111 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 LPIN2Q92539 896 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
RGPD5-201ENST00000016946 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.72□□□□□ -0.37
RGPD5-201ENST00000016946 TCIRG1Q13488 830 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 KLHDC4Q8TBB5 520 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 TNPO1Q92973 898 aaKnown RBP12.72□□□□□ -0.37
RGPD5-201ENST00000016946 HELLSQ9NRZ9 838 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 BIN1O00499 593 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 NEFHP12036 1026 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 ENOX2Q16206 610 aaKnown RBP12.72□□□□□ -0.37
RGPD5-201ENST00000016946 CCDC174Q6PII3 467 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 CERS3Q8IU89 383 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 SMC5Q8IY18 1101 aa12.72□□□□□ -0.37
RGPD5-201ENST00000016946 HOOK2Q96ED9 719 aa12.71□□□□□ -0.37
RGPD5-201ENST00000016946 MBD5Q9P267 1494 aa12.71□□□□□ -0.37
RGPD5-201ENST00000016946 TDRD12Q587J7 1177 aaKnown RBP12.71□□□□□ -0.37
RGPD5-201ENST00000016946 NIM1KQ8IY84 436 aa12.71□□□□□ -0.37
RGPD5-201ENST00000016946 ZNF594Q96JF6 807 aaPredicted RBP12.71□□□□□ -0.37
RGPD5-201ENST00000016946 GNA11P29992 359 aa12.71□□□□□ -0.37
RGPD5-201ENST00000016946 RPS8P62241 208 aaKnown RBP12.71□□□□□ -0.37
RGPD5-201ENST00000016946 MLH3Q9UHC1 1453 aa12.71□□□□□ -0.37
RGPD5-201ENST00000016946 ZBTB7BO15156 539 aaPredicted RBP12.71□□□□□ -0.37
RGPD5-201ENST00000016946 TAF5LO75529 589 aa12.71□□□□□ -0.37
RGPD5-201ENST00000016946 PRKCSHP14314 528 aaPredicted RBP12.71□□□□□ -0.37
RGPD5-201ENST00000016946 FAM114A1Q8IWE2 563 aa12.71□□□□□ -0.37
RGPD5-201ENST00000016946 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
RGPD5-201ENST00000016946 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.38
RGPD5-201ENST00000016946 PICK1Q9NRD5 415 aa12.71□□□□□ -0.38
RGPD5-201ENST00000016946 EFCAB6Q5THR3 1501 aa12.71□□□□□ -0.38
RGPD5-201ENST00000016946 ZNF408Q9H9D4 720 aa12.71□□□□□ -0.38
RGPD5-201ENST00000016946 PBRM1Q86U86 1689 aa12.71□□□□□ -0.38
RGPD5-201ENST00000016946 INSRP06213 1382 aa12.71□□□□□ -0.38
RGPD5-201ENST00000016946 USP37Q86T82 979 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 TRIM75PA6NK02 468 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 SUCLG2Q96I99 432 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 RMND1Q9NWS8 449 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.7□□□□□ -0.38
RGPD5-201ENST00000016946 KIAA0232Q92628 1395 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 YEATS4O95619 227 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 ZSCAN22P10073 491 aaPredicted RBP12.7□□□□□ -0.38
RGPD5-201ENST00000016946 USP8P40818 1118 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 NLGN1Q8N2Q7 840 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 KCNG4Q8TDN1 519 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 EXOC1Q9NV70 894 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 GOLGA6L10A6NI86 522 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 CREB3L3Q68CJ9 461 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 ZNF771Q7L3S4 317 aaPredicted RBP12.7□□□□□ -0.38
RGPD5-201ENST00000016946 TBC1D22AQ8WUA7 517 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 BCS1LQ9Y276 419 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 ERLIN1O75477 346 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 RXRBP28702 533 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 CARD10Q9BWT7 1032 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 MROH5Q6ZUA9 1318 aa12.7□□□□□ -0.38
RGPD5-201ENST00000016946 AXDND1Q5T1B0 1012 aaPredicted RBP12.69□□□□□ -0.38
RGPD5-201ENST00000016946 NUP88Q99567 741 aaPredicted RBP12.69□□□□□ -0.38
RGPD5-201ENST00000016946 SAP30BPQ9UHR5 308 aaKnown RBP12.69□□□□□ -0.38
RGPD5-201ENST00000016946 PARP1P09874 1014 aaKnown RBP12.69□□□□□ -0.38
RGPD5-201ENST00000016946 SYKP43405 635 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 FAM196AQ6ZSG2 479 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 PLEKHM2Q8IWE5 1019 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 ERBB4Q15303 1308 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 GIGYF1O75420 1035 aaPredicted RBP12.69□□□□□ -0.38
RGPD5-201ENST00000016946 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 ZSCAN12O43309 604 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 PPIP5K2O43314 1243 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 MSL1Q68DK7 614 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 ZNF335Q9H4Z2 1342 aaPredicted RBP12.69□□□□□ -0.38
RGPD5-201ENST00000016946 CHMLP26374 656 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 TMOD4Q9NZQ9 345 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 ARHGEF25Q86VW2 580 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 IL17REQ8NFR9 667 aa12.69□□□□□ -0.38
RGPD5-201ENST00000016946 STAT6P42226 847 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 STX1AQ16623 288 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 CHST3Q7LGC8 479 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 TRIM47Q96LD4 638 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 NLRP1Q9C000 1473 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 SIK1P57059 783 aa12.68□□□□□ -0.38
RGPD5-201ENST00000016946 CPLX3Q8WVH0 158 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms