RNA–Protein interactions for RNA: ENSMUST00000173243.7

Ccdc28a-203, Transcript of Coiled-coil domain-containing 28A, mousemouse

TSL 5 BASIC

Gene Ccdc28a, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-203ENSMUST00000173243 Nfe2l3Q9WTM4 660 aa15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Irs4Q9Z0Y7 1216 aa15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Mbd3Q9Z2D8 285 aaKnown RBP15.08■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Ankrd63A2ARS0 390 aa15.07■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Polr3dQ91WD1 398 aa15.07■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Ubxn2aQ99KJ0 258 aa15.07■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Sytl4Q9R0Q1 673 aa15.07■□□□□ 0
Ccdc28a-203ENSMUST00000173243 NrapQ80XB4 1728 aa15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Chd5A2A8L1 1946 aa15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Myh13B1AR69 1938 aa15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 A0A1W2P7S8 802 aa15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Ets1P27577 440 aa15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Cdc5lQ6A068 802 aaKnown RBP15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 HdlbpQ8VDJ3 1268 aaKnown RBP15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Upf1Q9EPU0 1124 aaKnown RBP15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Gtf2iQ9ESZ8 998 aaKnown RBP15.06■□□□□ 0
Ccdc28a-203ENSMUST00000173243 Duxf3A0A0N4SV92 674 aa15.05■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Izumo3A6PWV3 263 aa15.05■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Kifc2O08672 792 aa15.05■□□□□ -0
Ccdc28a-203ENSMUST00000173243 TsksO54887 585 aa15.05■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Abtb2Q7TQI7 1024 aa15.05■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Tmem67Q8BR76 992 aa15.05■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Peak1Q69Z38 1735 aa15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Thsd7bQ6P4U0 1607 aa15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Ifi207E9Q3L4 978 aa15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Arid4aF8VPQ2 1261 aaKnown RBP15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Timm10P62073 90 aa15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Kif22Q3V300 660 aa15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Agtpbp1Q641K1 1218 aa15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Asap2Q7SIG6 958 aa15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Sptlc3Q8BG54 563 aa15.04■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Neurod6P48986 337 aa15.03■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Cnot7Q60809 285 aa15.03■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Fzd9Q9R216 592 aa15.03■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Myh3P13541 1940 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Stxbp5lQ5DQR4 1185 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Sept9Q80UG5 583 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Tmem266Q8BZB3 538 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Edc3Q8K2D3 508 aaKnown RBP15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Ascc2Q91WR3 749 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Riok1Q922Q2 567 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Hdac9Q99N13 588 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Ppil2Q9D787 521 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Ccne2Q9Z238 404 aa15.02■□□□□ -0
Ccdc28a-203ENSMUST00000173243 Mageb2A2AHM0 380 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Npr3P70180 536 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 SobpQ0P5V2 864 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Slc10a5Q5PT54 434 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Trim27Q62158 513 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 DaglaQ6WQJ1 1044 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Ptrh1Q8BW00 204 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Slc44a4Q91VA1 707 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Klf15Q9EPW2 415 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Ripk4Q9ERK0 786 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Zcchc17Q9ESX4 241 aaKnown RBP15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Letm1Q9Z2I0 738 aa15.01□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Npc1l1Q6T3U4 1333 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Tbc1d4Q8BYJ6 1307 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Slc4a1P04919 929 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 LeprP48356 1162 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Nlrp9aQ66X03 949 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Sez6lQ6P1D5 963 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Ndfip2Q91ZP6 311 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 PdgfdQ925I7 370 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Stag1Q9D3E6 1258 aa15□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Cap1P40124 474 aa14.99□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Slc7a3P70423 618 aa14.99□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Large2Q5XPT3 690 aa14.99□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 DbnlQ62418 436 aa14.99□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Pcdh15Q99PJ1 1943 aa14.99□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Adam7O35227 789 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Pde4aO89084 844 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Hoxa7P02830 229 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Prl7d1P04769 244 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 D1Pas1P16381 660 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Prl3d1P18121 224 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Ppp1r21Q3TDD9 780 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Gja3Q64448 417 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Rapgefl1Q68EF8 662 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 LdhdQ7TNG8 484 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Fam160b2Q80YR2 744 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 4930504O13RikQ8C5Z9 145 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Kbtbd13Q8C828 458 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Mboat7Q8CHK3 473 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Angel2Q8K1C0 544 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Sf3a1Q8K4Z5 791 aaKnown RBP14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Noc3lQ8VI84 807 aaKnown RBP14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Tgm5Q9D7I9 724 aa14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Bag3Q9JLV1 577 aaKnown RBP14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Polr2aP08775 1970 aaKnown RBP14.98□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 UncxO08934 530 aa14.97□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Irf6P97431 467 aa14.97□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Fam83bQ0VBM2 1012 aa14.97□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Rbm15bQ6PHZ5 887 aaKnown RBP14.97□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Nme8Q715T0 586 aa14.97□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Tmem179Q8BHH9 233 aa14.97□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Ppil4Q9CXG3 492 aaKnown RBP14.97□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 RarsQ9D0I9 660 aaKnown RBP14.97□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Tuft1O08970 390 aa14.96□□□□□ -0.01
Ccdc28a-203ENSMUST00000173243 Spata18Q0P557 537 aa14.96□□□□□ -0.01
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms