RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 NinQ61043 2035 aa30.18■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 AU019823E9PUQ3 292 aa30.18■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 EspnlQ3UYR4 1005 aa30.18■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Tmem266Q8BZB3 538 aa30.18■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Polr3dQ91WD1 398 aa30.18■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Dpp7Q9ET22 506 aa30.18■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Tnip1Q9WUU8 647 aa30.18■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Psme4Q5SSW2 1843 aa30.17■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Rbm33Q9CXK9 1231 aaKnown RBP30.17■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Rlbp1Q9Z275 317 aa30.17■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Myh15E9Q264 1925 aa30.16■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Rps12P63323 132 aaKnown RBP30.16■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Sept9Q80UG5 583 aa30.16■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 HdlbpQ8VDJ3 1268 aaKnown RBP30.16■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Letm1Q9Z2I0 738 aa30.16■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Abtb2Q7TQI7 1024 aa30.15■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Slc26a8Q8R0C3 999 aa30.15■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Bag3Q9JLV1 577 aaKnown RBP30.15■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Slc4a1P04919 929 aa30.14■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 DbnlQ62418 436 aa30.14■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 Sf3a1Q8K4Z5 791 aaKnown RBP30.14■■■□□ 2.42
Cpsf4-201ENSMUST00000070487 GmpsQ3THK7 693 aa30.14■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Riok1Q922Q2 567 aa30.13■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 FanclQ9CR14 375 aa30.13■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Ecm29Q6PDI5 1840 aa30.13■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Myh4Q5SX39 1939 aa30.13■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Wwc1Q5SXA9 1104 aa30.12■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Nlrp9aQ66X03 949 aa30.12■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Noc3lQ8VI84 807 aaKnown RBP30.12■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Smarca5Q91ZW3 1051 aaKnown RBP30.12■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Ifi207E9Q3L4 978 aa30.11■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 NyxP83503 476 aa30.11■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Slc44a4Q91VA1 707 aa30.11■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 CarsQ9ER72 831 aaKnown RBP30.11■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 NynrinQ5DTZ0 1840 aa30.11■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Atg4a-psA0A0G2JFS9 396 aa30.11■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Csrnp3P59055 597 aa30.11■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Atg4aQ8C9S8 396 aa30.11■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Kif22Q3V300 660 aa30.1■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Fam83bQ0VBM2 1012 aa30.09■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Hs1bp3Q3TC93 395 aa30.09■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Ptrh1Q8BW00 204 aa30.09■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Tnnt3Q9QZ47 272 aa30.09■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 CpdO89001 1377 aa30.08■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Ppp1r21Q3TDD9 780 aa30.08■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Large2Q5XPT3 690 aa30.08■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Armcx1Q9CX83 456 aa30.08■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Stag1Q9D3E6 1258 aa30.08■■■□□ 2.41
Cpsf4-201ENSMUST00000070487 Prl3d1P18121 224 aa30.07■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Mmp14P53690 582 aa30.07■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Slc7a3P70423 618 aa30.07■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Bms1Q6PGF5 1284 aaKnown RBP30.07■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Ubxn2aQ99KJ0 258 aa30.07■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Prkrip1Q9CWV6 186 aaKnown RBP30.07■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Ripk4Q9ERK0 786 aa30.07■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Tmem67Q8BR76 992 aa30.07■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Tbc1d4Q8BYJ6 1307 aa30.06■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Mapkapk5O54992 473 aa30.06■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Prl7d1P04769 244 aa30.06■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Kcnh8P59111 1102 aa30.06■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Rbm15bQ6PHZ5 887 aaKnown RBP30.06■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Fam160b2Q80YR2 744 aa30.06■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 RarsQ9D0I9 660 aaKnown RBP30.06■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Nfe2l3Q9WTM4 660 aa30.06■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Slc4a9E9PUP3 929 aa30.05■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Krt25Q8VCW2 446 aa30.05■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Arfgef1G3X9K3 1846 aaKnown RBP30.05■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Pram1Q6BCL1 675 aa30.04■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Fam84aQ9D650 292 aa30.04■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Aldh8a1Q8BH00 487 aa30.04■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Eif2s2Q99L45 331 aaKnown RBP30.04■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 SkilQ60665 675 aa30.03■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Cnot7Q60809 285 aa30.03■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Hdac9Q99N13 588 aa30.03■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Arid4aF8VPQ2 1261 aaKnown RBP30.02■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 Agtpbp1Q641K1 1218 aa30.02■■■□□ 2.4
Cpsf4-201ENSMUST00000070487 D1Pas1P16381 660 aa30.01■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 PgfP49764 158 aa30.01■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Mxd3Q80US8 206 aa30.01■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 NsmfQ99NF2 532 aa30.01■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Tuft1O08970 390 aa30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Nme8Q715T0 586 aa30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Ppil4Q9CXG3 492 aaKnown RBP30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Ube3bQ9ES34 1070 aa30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Pappa2E9PZ87 1789 aa30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 TnksQ6PFX9 1320 aa30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Mageb2A2AHM0 380 aa30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Slc10a5Q5PT54 434 aa30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Ascc2Q91WR3 749 aa30■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Hoxa7P02830 229 aa29.99■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 LifrP42703 1092 aa29.99■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Tmem179Q8BHH9 233 aa29.99■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Cap1P40124 474 aa29.98■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Stat5bP42232 786 aa29.98■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Ppil2Q9D787 521 aa29.98■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Ccdc27Q3V036 639 aa29.97■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Pcdhb5Q91XZ5 792 aa29.97■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Gcc1Q9D4H2 778 aa29.97■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Cyp3a57D3YYZ0 503 aa29.96■■■□□ 2.39
Cpsf4-201ENSMUST00000070487 Gm3893E9Q1I1 302 aa29.96■■■□□ 2.39
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms