RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 REEP6Q96HR9 211 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 LRGUKQ96M69 825 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 INTS14Q96SY0 518 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 AMELYQ99218 206 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 PCGF1Q9BSM1 259 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 ABHD6Q9BV23 337 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 ZNF747Q9BV97 191 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 PPP1R3EQ9H7J1 279 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 ERVK-18Q9QC07 812 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 CMYA5Q8N3K9 4069 aa11.56□□□□□ -0.56
LINC00339-211ENST00000641009 IGHV3OR15-7A0A075B7D8 119 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 TRAV38-1A0A0B4J264 116 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 ANKRD30BLA7E2S9 258 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 CLDN34H7C241 214 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 TNFRSF13BO14836 293 aaPredicted RBP11.55□□□□□ -0.56
LINC00339-211ENST00000641009 FCN3O75636 299 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 CST1P01037 141 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 GSTT1P30711 240 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 GRK5P34947 590 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 BLVRAP53004 296 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 DEFB112Q30KQ8 113 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 GFOD2Q3B7J2 385 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 GPR157Q5UAW9 335 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 RUSC1-AS1Q66K80 236 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 CD300LDQ6UXZ3 194 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 FAM57BQ71RH2 274 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 PRSS45Q7RTY3 260 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 TMEM179BQ7Z7N9 219 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 WDR86Q86TI4 376 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 FAM90A1Q86YD7 464 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 OR8S1Q8NH09 359 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 GIPC3Q8TF64 312 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 RNF133Q8WVZ7 376 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 SGK3Q96BR1 496 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 CHID1Q9BWS9 393 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 OR51V1Q9H2C8 321 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 TOR3AQ9H497 397 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 BRD7Q9NPI1 651 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 C14orf119Q9NWQ9 140 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 ZNF319Q9P2F9 582 aa11.55□□□□□ -0.56
LINC00339-211ENST00000641009 PRPF19Q9UMS4 504 aaKnown RBP11.55□□□□□ -0.56
LINC00339-211ENST00000641009 hCG_38984A0A1B0GV85 526 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 ACOT8O14734 319 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 TMPRSS2O15393 492 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 HOXA3O43365 443 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-211ENST00000641009 GLCEO94923 617 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 CFHR2P36980 270 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 DDOSTP39656 456 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 ZNF121P58317 390 aaPredicted RBP11.54□□□□□ -0.56
LINC00339-211ENST00000641009 MZT1Q08AG7 82 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 KLHL12Q53G59 568 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 CD276Q5ZPR3 534 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 C11orf53Q8IXP5 236 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 TIGD4Q8IY51 512 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 ADGRG5Q8IZF4 528 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 CCDC197Q8NCU1 140 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 MARCH7Q9H992 704 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 UNKLQ9H9P5 680 aaKnown RBP11.54□□□□□ -0.56
LINC00339-211ENST00000641009 TRIM36Q9NQ86 728 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 TNFRSF19Q9NS68 423 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 TAS2R1Q9NYW7 299 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 VWFP04275 2813 aa11.54□□□□□ -0.56
LINC00339-211ENST00000641009 ZNF879B4DU55 563 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 NDUFA2O43678 99 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 TOX4O94842 621 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 FAM107AO95990 144 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 LHBP01229 141 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 MMP9P14780 707 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 POU1F1P28069 291 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 OPRL1P41146 370 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 GSK3AP49840 483 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 CSNK2BP67870 215 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 ELF3P78545 371 aaPredicted RBP11.53□□□□□ -0.56
LINC00339-211ENST00000641009 SHISA2Q6UWI4 295 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 FGFRL1Q8N441 504 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 LRRC29Q8WV35 223 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 ZDHHC16Q969W1 377 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 TBX15Q96SF7 602 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 THTPAQ9BU02 230 aa11.53□□□□□ -0.56
LINC00339-211ENST00000641009 A0A1B0GW55 424 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 ARRDC5A6NEK1 342 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DVL1O14640 695 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 SELENOFO60613 162 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 APOC1P02654 83 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 H2BFMP0C1H6 154 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DUX4L2P0CJ85 424 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DUX4L3P0CJ86 424 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DUX4L4P0CJ87 422 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DUX4L5P0CJ88 424 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DUX4L6P0CJ89 424 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DUX4L7P0CJ90 424 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 MDKP21741 143 aaPredicted RBP11.52□□□□□ -0.56
LINC00339-211ENST00000641009 PAICSP22234 425 aaKnown RBP11.52□□□□□ -0.56
LINC00339-211ENST00000641009 OMGP23515 440 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 IL13RA1P78552 427 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 TEX36Q5VZQ5 186 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 PLBD1Q6P4A8 553 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 C16orf87Q6PH81 154 aa11.52□□□□□ -0.56
LINC00339-211ENST00000641009 DUX4L9Q6RFH8 374 aaPredicted RBP11.52□□□□□ -0.56
LINC00339-211ENST00000641009 BTN2A1Q7KYR7 527 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms