RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	IL22RA1	Q8N6P7	574 aa		10.21	□□□□□ -0.77
SPIN3-231	ENST00000639895	CYB561D1	Q8N8Q1	229 aa		10.21	□□□□□ -0.77
SPIN3-231	ENST00000639895	OR5L1	Q8NGL2	311 aa		10.21	□□□□□ -0.77
SPIN3-231	ENST00000639895	HIST1H2BH	Q93079	126 aa		10.21	□□□□□ -0.77
SPIN3-231	ENST00000639895	HIST1H2BN	Q99877	126 aa		10.21	□□□□□ -0.77
SPIN3-231	ENST00000639895	HIST1H2BM	Q99879	126 aa		10.21	□□□□□ -0.77
SPIN3-231	ENST00000639895	TMEM208	Q9BTX3	173 aa		10.21	□□□□□ -0.77
SPIN3-231	ENST00000639895	OR1A2	Q9Y585	309 aa		10.21	□□□□□ -0.77
SPIN3-231	ENST00000639895	AQP7P3	A6NL99	342 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895		G3V3Q6	166 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	PRNP	P04156	253 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	CDPF1	Q6NVV7	123 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	VIT	Q6UXI7	678 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	RCBTB1	Q8NDN9	531 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	OR1P1	Q8NH06	330 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	CPEB1	Q9BZB8	566 aa	Known RBP	10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	MAGT1	Q9H0U3	335 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	ZMIZ1	Q9ULJ6	1067 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	COLEC10	Q9Y6Z7	277 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	RAD51D	O75771	328 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	SFT2D2	O95562	160 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	ZNF93	P35789	620 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	PRLHR	P49683	370 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	ARL4D	P49703	201 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	ELL	P55199	621 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	C21orf58	P58505	322 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	SLC22A24	Q8N4F4	322 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	CCDC71L	Q8N9Z2	235 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	VN1R17P	Q8TDU5	208 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	BORCS7	Q96B45	105 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	NUDT9	Q9BW91	350 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	PLK3	Q9H4B4	646 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	OR52A1	Q9UKL2	312 aa		10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	ZNF346	Q9UL40	294 aa	Known RBP	10.21	□□□□□ -0.78
SPIN3-231	ENST00000639895	KNTC1	P50748	2209 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	LNP1	A1A4G5	178 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	PPIC	P45877	212 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	FABP6	P51161	128 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	RPS18	P62269	152 aa	Known RBP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TRA2B	P62995	288 aa	Known RBP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	ZNF787	Q6DD87	383 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	CHRDL2	Q6WN34	429 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	LSR	Q86X29	649 aa	Predicted RBP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	FAM3C	Q92520	227 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	SDF2	Q99470	211 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TBL1XR1	Q9BZK7	514 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	ZDHHC11	Q9H8X9	412 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	MARCH5	Q9NX47	278 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895		A0A1W2PR48	441 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	DVL1	O14640	695 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TTR	P02766	147 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	MMP16	P51512	607 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TPPP2	P59282	170 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	ENDOG	Q14249	297 aa	Known RBP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	LY6G6F	Q5SQ64	297 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	PLPP4	Q5VZY2	271 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	GLIPR1L1	Q6UWM5	242 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TMEM64	Q6YI46	380 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	STT3B	Q8TCJ2	826 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TSLP	Q969D9	159 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	ARHGDIG	Q99819	225 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TUBA4B	Q9H853	241 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	LYRM2	Q9NU23	88 aa	Predicted RBP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	BET1L	Q9NYM9	111 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	MAP1B	P46821	2468 aa	Known RBP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	HSBP1L1	C9JCN9	74 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	PIN1P1	O15428	100 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	SOD3	P08294	240 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	LAG3	P18627	525 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	APLNR	P35414	380 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	GALR1	P47211	349 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	ZNF440	Q8IYI8	595 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	PRSS35	Q8N3Z0	413 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	EMG1	Q92979	244 aa	Known RBP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	RARRES2	Q99969	163 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TPSD1	Q9BZJ3	242 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	OR51B6	Q9H340	312 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TMEM9B	Q9NQ34	198 aa		10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	NXT1	Q9UKK6	140 aa	Known RBP	10.2	□□□□□ -0.78
SPIN3-231	ENST00000639895	TBX19	O60806	448 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	CD79A	P11912	226 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	CHRNB4	P30926	498 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	BSG	P35613	385 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	PPP1CC	P36873	323 aa	Known RBP	10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	TFPI2	P48307	235 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	RAB7A	P51149	207 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	HSD11B2	P80365	405 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	ISX	Q2M1V0	245 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	DMRTC1	Q5HYR2	192 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	MCHR2	Q969V1	340 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	CNRIP1	Q96F85	164 aa	Predicted RBP	10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	ZNF2	Q9BSG1	426 aa	Predicted RBP	10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	RAB11FIP5	Q9BXF6	653 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	RCL1	Q9Y2P8	373 aa	Known RBP	10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	TRAPPC1	Q9Y5R8	145 aa		10.19	□□□□□ -0.78
SPIN3-231	ENST00000639895	LOC107986453	A0A1B0GWG9	222 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms