RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 SF3B5Q9BWJ5 86 aaKnown RBP12.14□□□□□ -0.47
ATRIP-208ENST00000639561 HES7Q9BYE0 225 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 ULBP2Q9BZM5 246 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 ACTR6Q9GZN1 396 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 ELF5Q9UKW6 265 aaPredicted RBP12.14□□□□□ -0.47
ATRIP-208ENST00000639561 NAT1P18440 290 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 CNR1P21554 472 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 RFC3P40938 356 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 GFRA1P56159 465 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 GRB2P62993 217 aaKnown RBP12.14□□□□□ -0.47
ATRIP-208ENST00000639561 GFOD2Q3B7J2 385 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 SMUG1Q53HV7 270 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 RPUSD3Q6P087 351 aaKnown RBP12.14□□□□□ -0.47
ATRIP-208ENST00000639561 OR5D14Q8NGL3 314 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 OR4C16Q8NGL9 310 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 OR10D3Q8NH80 312 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 SSC4DQ8WTU2 575 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 FOXRED1Q96CU9 486 aaPredicted RBP12.14□□□□□ -0.47
ATRIP-208ENST00000639561 FAM71F1Q96KD3 344 aaPredicted RBP12.14□□□□□ -0.47
ATRIP-208ENST00000639561 METTL17Q9H7H0 456 aaPredicted RBP12.14□□□□□ -0.47
ATRIP-208ENST00000639561 CSAG2Q9Y5P2 127 aa12.14□□□□□ -0.47
ATRIP-208ENST00000639561 TRAV17A0A0B4J275 112 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 OR5H15A6NDH6 313 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ARPC1BO15143 372 aaKnown RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 RAB3AP20336 220 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 CCL1P22362 96 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 CTSSP25774 331 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 PRSS3P35030 304 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 GUCA1AP43080 201 aaPredicted RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 MRPL49Q13405 166 aaKnown RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 UNC119Q13432 240 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 RSPO1Q2MKA7 263 aaPredicted RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 CD276Q5ZPR3 534 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ZNF627Q7L945 461 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 PAQR4Q8N4S7 273 aaPredicted RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 GPX8Q8TED1 209 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 SPACA5Q96QH8 159 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ZMAT3Q9HA38 289 aaKnown RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 NOX3Q9HBY0 568 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 FLNCQ14315 2725 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 WIPF3A6NGB9 483 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ZNF20P17024 532 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 POU3F2P20265 443 aaPredicted RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ERP29P30040 261 aaKnown RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 QRFPP83859 136 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 PMPCAQ10713 525 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ABHD17BQ5VST6 288 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ABLIM2Q6H8Q1 611 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 FAM180AQ6UWF9 173 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 HIST2H3AQ71DI3 136 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 OR5AS1Q8N127 324 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ST6GALNAC3Q8NDV1 305 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 OR2V1Q8NHB1 315 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 HAS2Q92819 552 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 PTX4Q96A99 478 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 SEH1LQ96EE3 360 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 FBXO17Q96EF6 278 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ARPC5LQ9BPX5 153 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 TMEM246Q9BRR3 403 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 MRPS18CQ9Y3D5 142 aaKnown RBP12.13□□□□□ -0.47
ATRIP-208ENST00000639561 ZNF407Q9C0G0 2248 aa12.13□□□□□ -0.47
ATRIP-208ENST00000639561 DNAJC13O75165 2243 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 FAM172BPA6NC97 362 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 F5H5K5 113 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 FABP7O15540 132 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 NDUFB6O95139 128 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 CSF1P09603 554 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 EIF2S3LQ2VIR3 472 aaKnown RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 ACBD4Q8NC06 268 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 OR2M7Q8NG81 312 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 DACT3Q96B18 629 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 INTS12Q96CB8 462 aaKnown RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 ZNF845Q96IR2 970 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 LYZL4Q96KX0 146 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 PSMG3-AS1Q96PY0 264 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 ALKBH3Q96Q83 286 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 UQCC2Q9BRT2 126 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 TRAF4Q9BUZ4 470 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 ZNF703Q9H7S9 590 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 RP1L1Q8IWN7 2480 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 MYO7BQ6PIF6 2116 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 HECTD1Q9ULT8 2610 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 ICMTO60725 284 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 IGLV3-1P01715 115 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 CD3DP04234 171 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 CELA3AP09093 270 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 OTX1P32242 354 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-208ENST00000639561 RAD52P43351 418 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 ZP1P60852 638 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 TNK1Q13470 666 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 Q6ZTK2 550 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 FGD2Q7Z6J4 655 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 ZFAND1Q8TCF1 268 aa12.12□□□□□ -0.47
ATRIP-208ENST00000639561 FAM46BQ96A09 425 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms