RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 FOXRED2Q8IWF2 684 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 ARRDC1Q8N5I2 433 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 OR13G1Q8NGZ3 307 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 NUBPLQ8TB37 319 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 SFT2D1Q8WV19 159 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 MAFIPQ8WZ33 124 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 DAZLQ92904 295 aaKnown RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 ARHGAP5-AS1Q96IT6 56 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 SMIM8Q96KF7 97 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 NUDT16L1Q9BRJ7 211 aaKnown RBP9.67□□□□□ -0.86
SNIP1-204ENST00000638725 GSKIPQ9P0R6 139 aa9.67□□□□□ -0.86
SNIP1-204ENST00000638725 H3BML4 177 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 LINC01387J3KSC0 135 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 MED6O75586 246 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 HOXB5P09067 269 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 GSTP1P09211 210 aaKnown RBP9.66□□□□□ -0.86
SNIP1-204ENST00000638725 SFTA3P0C7M3 94 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 FPR2P25090 351 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 HYAL1Q12794 435 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 ZP4Q12836 540 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 AKIRIN2Q53H80 203 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 LANCL3Q6ZV70 420 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 ABHD12BQ7Z5M8 362 aaPredicted RBP9.66□□□□□ -0.86
SNIP1-204ENST00000638725 DMBX1Q8NFW5 382 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 OR1N1Q8NGS0 311 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 OR5H2Q8NGV7 314 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 LILRB1Q8NHL6 650 aaPredicted RBP9.66□□□□□ -0.86
SNIP1-204ENST00000638725 LMX1AQ8TE12 382 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 TMEM59Q9BXS4 323 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.66□□□□□ -0.86
SNIP1-204ENST00000638725 SLC26A1Q9H2B4 701 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 CEACAM18A8MTB9 384 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 C9JQL5 133 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 RNASEK-C17orf49H0YIS7 233 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 HEXAP06865 529 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 AMY2BP19961 511 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 GLRA1P23415 457 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 ID4P47928 161 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 ARFRP1Q13795 201 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 C1orf189Q5VU69 101 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 C5orf46Q6UWT4 87 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 ETV3LQ6ZN32 361 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 ZNF441Q8N8Z8 693 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 POC1AQ8NBT0 407 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 FAM71F1Q96KD3 344 aaPredicted RBP9.66□□□□□ -0.86
SNIP1-204ENST00000638725 C2orf50Q96LR7 162 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 CRB3Q9BUF7 120 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 ST6GALNAC5Q9BVH7 336 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 TMEM106CQ9BVX2 250 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 CHST11Q9NPF2 352 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 SRPK3Q9UPE1 567 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 PCDHGA1Q9Y5H4 931 aa9.66□□□□□ -0.86
SNIP1-204ENST00000638725 IGHV3-20A0A0C4DH32 117 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 LILRA5A6NI73 299 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 H3BMH7 237 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 CRTAPO75718 401 aaPredicted RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 P2RY4P51582 365 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 CCR5P51681 352 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 ACTBL2Q562R1 376 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 AADACL3Q5VUY0 350 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 SHISA6Q6ZSJ9 500 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 PEG10Q86TG7 708 aaKnown RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 MFSD8Q8NHS3 518 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 KCNG3Q8TAE7 436 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 TMEM234Q8WY98 164 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 SAT2Q96F10 170 aaPredicted RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 CDCA3Q99618 268 aaPredicted RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 SEC61A2Q9H9S3 476 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 TAF9BQ9HBM6 251 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 ZNF319Q9P2F9 582 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 MMP17Q9ULZ9 603 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 POLR1DQ9Y2S0 133 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 WIF1Q9Y5W5 379 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 COL5A1P20908 1838 aaPredicted RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 SPTBN5Q9NRC6 3674 aaKnown RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 COLCA2A8K830 154 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 MFNGO00587 321 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 FBXO24O75426 580 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 APOC1P02654 83 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 SFTPBP07988 381 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 HCKP08631 526 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 RPS2P15880 293 aaKnown RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 CDAP32320 146 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 CD80P33681 288 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 DHPSP49366 369 aaPredicted RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 DLX2Q07687 328 aaPredicted RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 FOXF1Q12946 379 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 PEA15Q15121 130 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 OR2A2Q6IF42 318 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 LHFPL1Q86WI0 220 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 OR8B12Q8NGG6 310 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 THAP3Q8WTV1 239 aaPredicted RBP9.65□□□□□ -0.86
SNIP1-204ENST00000638725 RLN3Q8WXF3 142 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 GPER1Q99527 375 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 MESP1Q9BRJ9 268 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 VN1R1Q9GZP7 353 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 SLC22A11Q9NSA0 550 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 PLA2G2EQ9NZK7 142 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 SUSD2Q9UGT4 822 aa9.65□□□□□ -0.86
SNIP1-204ENST00000638725 CD207Q9UJ71 328 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms