RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 SPACA3Q8IXA5 215 aa18.84■□□□□ 0.61
CHRNA7-228ENST00000637519 PIGTQ969N2 578 aa18.84■□□□□ 0.61
CHRNA7-228ENST00000637519 PHF21AQ96BD5 680 aa18.84■□□□□ 0.61
CHRNA7-228ENST00000637519 GMPPAQ96IJ6 420 aaPredicted RBP18.84■□□□□ 0.61
CHRNA7-228ENST00000637519 DIABLOQ9NR28 239 aa18.84■□□□□ 0.61
CHRNA7-228ENST00000637519 WASF3Q9UPY6 502 aa18.84■□□□□ 0.61
CHRNA7-228ENST00000637519 BSNQ9UPA5 3926 aa18.84■□□□□ 0.61
CHRNA7-228ENST00000637519 A0A1W2PP11 408 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 SS18L1O75177 396 aaPredicted RBP18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 GABRA1P14867 456 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 MNDAP41218 407 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 PLA1AQ53H76 456 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 AGAP6Q5VW22 663 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 CRIP3Q6Q6R5 217 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 C9orf106Q8NAJ2 232 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 CMBLQ96DG6 245 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 CYYR1Q96J86 154 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 UQCC2Q9BRT2 126 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 PLSCR2Q9NRY7 297 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 GPR173Q9NS66 373 aa18.83■□□□□ 0.61
CHRNA7-228ENST00000637519 ERCC1P07992 297 aaPredicted RBP18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 THBS4P35443 961 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 OR3A2P47893 321 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 QRFPP83859 136 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 ZNF92Q03936 586 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 GLIPR1L1Q6UWM5 242 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 Q6ZS92 163 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 MS4A3Q96HJ5 214 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 GPER1Q99527 375 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 CHST5Q9GZS9 411 aa18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 MRPS28Q9Y2Q9 187 aaKnown RBP18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 RBMX2Q9Y388 322 aaKnown RBP18.83■□□□□ 0.6
CHRNA7-228ENST00000637519 C5orf49A4QMS7 147 aa18.82■□□□□ 0.6
CHRNA7-228ENST00000637519 GIFP27352 417 aa18.82■□□□□ 0.6
CHRNA7-228ENST00000637519 HACD4Q5VWC8 232 aa18.82■□□□□ 0.6
CHRNA7-228ENST00000637519 FGD2Q7Z6J4 655 aa18.82■□□□□ 0.6
CHRNA7-228ENST00000637519 ZNF101Q8IZC7 436 aa18.82■□□□□ 0.6
CHRNA7-228ENST00000637519 SEMA6DQ8NFY4 1073 aa18.82■□□□□ 0.6
CHRNA7-228ENST00000637519 SARAFQ96BY9 339 aa18.82■□□□□ 0.6
CHRNA7-228ENST00000637519 LHX6Q9UPM6 363 aa18.82■□□□□ 0.6
CHRNA7-228ENST00000637519 WIPF3A6NGB9 483 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 GMDSO60547 372 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 MTRF1O75570 445 aaKnown RBP18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 MPGP29372 298 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 RAB1AP62820 205 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 TATDN3Q17R31 274 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 Q6ZSR3 168 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 ZNF584Q8IVC4 421 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 CNEP1R1Q8N9A8 125 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 TMEM104Q8NE00 496 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 OR1K1Q8NGR3 316 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 UBASH3BQ8TF42 649 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 SSC4DQ8WTU2 575 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 PPP1R14BQ96C90 147 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 A0A1W2PR80 420 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 BPNT1O95861 308 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 SNTB2Q13425 540 aaKnown RBP18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 STK11Q15831 433 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 ZNF585AQ6P3V2 769 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 TFAP2EQ6VUC0 442 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 C1orf147Q96MC9 270 aaPredicted RBP18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 RABL2AQ9UBK7 228 aaPredicted RBP18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 RABL2BQ9UNT1 228 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 SVILO95425 2214 aa18.81■□□□□ 0.6
CHRNA7-228ENST00000637519 TRAV6A0A075B6T7 132 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 ACACAQ13085 2346 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 KISS1Q15726 138 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 PLEKHN1Q494U1 663 aaPredicted RBP18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 VWA1Q6PCB0 445 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 C1QL2Q7Z5L3 287 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 NICN1Q9BSH3 213 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 BANF2Q9H503 90 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 HRASLSQ9HDD0 168 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 NUDT15Q9NV35 164 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 A8MV72 311 aaPredicted RBP18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 ALDOBP05062 364 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 STOMP27105 288 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 FAM3AP98173 230 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 FOXF2Q12947 444 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 TSC22D1Q15714 1073 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 ACSF3Q4G176 576 aaPredicted RBP18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 SFRP4Q6FHJ7 346 aaPredicted RBP18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 FAM214BQ7L5A3 538 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 AKAP14Q86UN6 197 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 PP6455Q8WZ26 134 aa18.8■□□□□ 0.6
CHRNA7-228ENST00000637519 hCG_38984A0A1B0GV85 526 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 TMEM235A6NFC5 223 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 CENPXA8MT69 81 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 RAD51DO75771 328 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 GSK3AP49840 483 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 MRPS10P82664 201 aaKnown RBP18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 ITPKCQ96DU7 683 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 ABHD17AQ96GS6 310 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 MARVELD1Q9BSK0 173 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 C1QTNF5Q9BXJ0 243 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 GP6Q9HCN6 339 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 ALG5Q9Y673 324 aa18.79■□□□□ 0.6
CHRNA7-228ENST00000637519 ANKRD20A5PA0PJZ0 165 aa18.78■□□□□ 0.6
CHRNA7-228ENST00000637519 TMEM14DPA8MWL7 114 aa18.78■□□□□ 0.6
CHRNA7-228ENST00000637519 LYZL6O75951 148 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms