RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SGMS2Q8NHU3 365 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 REEP6Q96HR9 211 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 FEVQ99581 238 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 YY1AP1Q9H869 796 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 MED20Q9H944 212 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 MARCH7Q9H992 704 aa14.95□□□□□ -0.02
PNKP-225ENST00000636214 PDP1Q9P0J1 537 aaPredicted RBP14.95□□□□□ -0.02
PNKP-225ENST00000636214 OOEPA6NGQ2 149 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 FAM183AA6NL82 134 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 AQP12BA6NM10 295 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 GLCEO94923 617 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 H2BFMP0C1H6 154 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 PAX2Q02962 417 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 FAM57BQ71RH2 274 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 SLC16A9Q7RTY1 509 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 AQP12AQ8IXF9 295 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 RNF133Q8WVZ7 376 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 ZDHHC16Q969W1 377 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 PGAM5Q96HS1 289 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 CLPTM1LQ96KA5 538 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 ABHD6Q9BV23 337 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 BRD7Q9NPI1 651 aa14.94□□□□□ -0.02
PNKP-225ENST00000636214 HMGN1P05114 100 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 LIPFP07098 398 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 HKR1P10072 659 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 FGF12P61328 243 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 RPS7P62081 194 aaKnown RBP14.93□□□□□ -0.02
PNKP-225ENST00000636214 DNAL1Q4LDG9 190 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 KLHL12Q53G59 568 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 LINC01590Q5TEZ4 76 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 C9orf139Q6ZV77 190 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 ADGRG5Q8IZF4 528 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 PNLDC1Q8NA58 520 aaKnown RBP14.93□□□□□ -0.02
PNKP-225ENST00000636214 CSNK2A3Q8NEV1 391 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 SPSB4Q96A44 273 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 PCGF1Q9BSM1 259 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 PAPOLGQ9BWT3 736 aaKnown RBP14.93□□□□□ -0.02
PNKP-225ENST00000636214 TAS2R1Q9NYW7 299 aa14.93□□□□□ -0.02
PNKP-225ENST00000636214 C5orf63A6NC05 138 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 ANXA2P2A6NMY6 339 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 TIPRLO75663 272 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 PTBP3O95758 552 aaKnown RBP14.92□□□□□ -0.02
PNKP-225ENST00000636214 LYNP07948 512 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 T-ENOLP0DO92 83 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 PSMB10P40306 273 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 ZNF121P58317 390 aaPredicted RBP14.92□□□□□ -0.02
PNKP-225ENST00000636214 BPIFB3P59826 476 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 FLOT2Q14254 428 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 GINS1Q14691 196 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 METTL11BQ5VVY1 283 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 RHOUQ7L0Q8 258 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 SPATA24Q86W54 205 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 ZNF454Q8N9F8 522 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 THEM6Q8WUY1 208 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 CANT1Q8WVQ1 401 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 RGCCQ9H4X1 137 aa14.92□□□□□ -0.02
PNKP-225ENST00000636214 C22orf46C9J442 243 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 P2RY10O00398 339 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 ACOT8O14734 319 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 GYG2O15488 501 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 PLATP00750 562 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 GYPAP02724 150 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 RNASE1P07998 156 aaKnown RBP14.91□□□□□ -0.02
PNKP-225ENST00000636214 ANXA8P13928 327 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 ANOS1P23352 680 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 NAA10P41227 235 aaPredicted RBP14.91□□□□□ -0.02
PNKP-225ENST00000636214 FAM3AP98173 230 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 MICBQ29980 383 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 PLBD1Q6P4A8 553 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 ZNF841Q6ZN19 808 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 ZNF826PQ6ZT77 177 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 LRRC29Q8WV35 223 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 ZNF48Q96MX3 618 aaPredicted RBP14.91□□□□□ -0.02
PNKP-225ENST00000636214 MICU1Q9BPX6 476 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 ABCB9Q9NP78 766 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 PCDHGB1Q9Y5G3 927 aa14.91□□□□□ -0.02
PNKP-225ENST00000636214 hCG_38984A0A1B0GV85 526 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 ZNF879B4DU55 563 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 CLDN34H7C241 214 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 PRODHO43272 600 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 SPRY1O43609 319 aaPredicted RBP14.9□□□□□ -0.02
PNKP-225ENST00000636214 TOX4O94842 621 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 OSMP13725 252 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 OPRL1P41146 370 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 GSK3AP49840 483 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 IL13RA1P78552 427 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 IL5RAQ01344 420 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 SLC9A3R2Q15599 337 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 BRD3OSQ6XYD6 125 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 TIGD4Q8IY51 512 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 GCSAMQ8N6F7 178 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 ST8SIA4Q92187 359 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 DACT3Q96B18 629 aaPredicted RBP14.9□□□□□ -0.02
PNKP-225ENST00000636214 SGK3Q96BR1 496 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 RTL8AQ9BWD3 113 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 RNPEPL1Q9HAU8 725 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 CTSZQ9UBR2 303 aa14.9□□□□□ -0.02
PNKP-225ENST00000636214 MGAM2Q2M2H8 2515 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 TMPRSS2O15393 492 aa14.89□□□□□ -0.03
PNKP-225ENST00000636214 SELENOFO60613 162 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms