RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 C19orf18Q8NEA5 215 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 OR8S1Q8NH09 359 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 OTOSQ8NHW6 89 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 THEM6Q8WUY1 208 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 GCDHQ92947 438 aaPredicted RBP9.05□□□□□ -0.96
SSBP4-215ENST00000625926 NRBF2Q96F24 287 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 REEP6Q96HR9 211 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 AMELYQ99218 206 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 OR10A2Q9H208 303 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 TRIM36Q9NQ86 728 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 C1orf123Q9NWV4 160 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 DNAJC27Q9NZQ0 273 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 ERVK-18Q9QC07 812 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 MALRD1Q5VYJ5 2156 aa9.05□□□□□ -0.96
SSBP4-215ENST00000625926 SVEP1Q4LDE5 3571 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 TRAV38-1A0A0B4J264 116 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 A6NLC8 198 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 PHYHO14832 338 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 NDUFA2O43678 99 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 SELENOFO60613 162 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 PSMB10P40306 273 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 GSK3AP49840 483 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 NPY4RP50391 375 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 RPS7P62081 194 aaKnown RBP9.04□□□□□ -0.96
SSBP4-215ENST00000625926 SNCBQ16143 134 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 TMEM236Q5W0B7 351 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 WDR25Q64LD2 544 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-215ENST00000625926 ZNF841Q6ZN19 808 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 SIGLECL1Q8N7X8 197 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 ZDHHC22Q8N966 263 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 CSNK2A3Q8NEV1 391 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 DNAJC9Q8WXX5 260 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 PGAM5Q96HS1 289 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 NUDT16L1Q9BRJ7 211 aaKnown RBP9.04□□□□□ -0.96
SSBP4-215ENST00000625926 MS4A7Q9GZW8 240 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-215ENST00000625926 MMADHCQ9H3L0 296 aaPredicted RBP9.04□□□□□ -0.96
SSBP4-215ENST00000625926 RGCCQ9H4X1 137 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 BRD7Q9NPI1 651 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 ZNF319Q9P2F9 582 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 ZNF69Q9UC07 566 aa9.04□□□□□ -0.96
SSBP4-215ENST00000625926 YLPM1P49750 1951 aaKnown RBP9.04□□□□□ -0.96
SSBP4-215ENST00000625926 hCG_38984A0A1B0GV85 526 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 hCG_1807616A0A1W2PRN6 198 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 TMEM89A2RUT3 159 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 OOEPA6NGQ2 149 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 C3orf80F5H4A9 247 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 TNFRSF13BO14836 293 aaPredicted RBP9.03□□□□□ -0.96
SSBP4-215ENST00000625926 LHBP01229 141 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 GNALP38405 381 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 NAA10P41227 235 aaPredicted RBP9.03□□□□□ -0.96
SSBP4-215ENST00000625926 COMPP49747 757 aaPredicted RBP9.03□□□□□ -0.96
SSBP4-215ENST00000625926 RASSF2P50749 326 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 CRISP1P54107 249 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 HOXA4Q00056 320 aaPredicted RBP9.03□□□□□ -0.96
SSBP4-215ENST00000625926 BNIP1Q12981 228 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 SNAPC1Q16533 368 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 TUSC1Q2TAM9 212 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 GFOD2Q3B7J2 385 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 CD276Q5ZPR3 534 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 ZNF826PQ6ZT77 177 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 DOK3Q7L591 496 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 PARP8Q8N3A8 854 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 FTMTQ8N4E7 242 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 GCSAMQ8N6F7 178 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 OR1M1Q8NGA1 313 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 DACT3Q96B18 629 aaPredicted RBP9.03□□□□□ -0.96
SSBP4-215ENST00000625926 UPRTQ96BW1 309 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 CADM1Q9BY67 442 aaKnown RBP9.03□□□□□ -0.96
SSBP4-215ENST00000625926 NIPAL2Q9H841 368 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 RNPEPL1Q9HAU8 725 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 SLC25A19Q9HC21 320 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 ESM1Q9NQ30 184 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 PAPOLBQ9NRJ5 636 aaKnown RBP9.03□□□□□ -0.96
SSBP4-215ENST00000625926 TVP23BQ9NYZ1 205 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 KIF17Q9P2E2 1029 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 ANK2Q01484 3957 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 PKD1L1Q8TDX9 2849 aa9.03□□□□□ -0.96
SSBP4-215ENST00000625926 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.02□□□□□ -0.973e-6■■□□□ 13.4
SSBP4-215ENST00000625926 ANXA2P2A6NMY6 339 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 ADAM20O43506 726 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 ENSAO43768 121 aaKnown RBP9.02□□□□□ -0.97
SSBP4-215ENST00000625926 TIPRLO75663 272 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 LIPFP07098 398 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 ALOX5APP20292 161 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 SLC2A5P22732 501 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 CFPP27918 469 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 MTNR1AP48039 350 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 UBA52P62987 128 aaKnown RBP9.02□□□□□ -0.97
SSBP4-215ENST00000625926 IL5RAQ01344 420 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 APOFQ13790 326 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 TEX36Q5VZQ5 186 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 FAHD1Q6P587 224 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 KCTD18Q6PI47 426 aaPredicted RBP9.02□□□□□ -0.97
SSBP4-215ENST00000625926 KRT77Q7Z794 578 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 BCL6BQ8N143 479 aaPredicted RBP9.02□□□□□ -0.97
SSBP4-215ENST00000625926 BBS1Q8NFJ9 593 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 OR5K1Q8NHB7 308 aa9.02□□□□□ -0.97
SSBP4-215ENST00000625926 UTP4Q969X6 686 aaKnown RBP9.02□□□□□ -0.97
SSBP4-215ENST00000625926 TECTBQ96PL2 329 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms