RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 PTP4A3O75365 173 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ZFAND5O76080 213 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ZIC2O95409 532 aaPredicted RBP8.07□□□□□ -1.12
VCL-206ENST00000623461 IGF2P01344 180 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ACRP10323 421 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 ZNF92Q03936 586 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 SPANXN5Q5MJ07 72 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 OR51E1Q8TCB6 317 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CHST6Q9GZX3 395 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 CLCF1Q9UBD9 225 aa8.07□□□□□ -1.12
VCL-206ENST00000623461 KIAA0100Q14667 2235 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 CHEK1O14757 476 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 ETHE1O95571 254 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 RAB32Q13637 225 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 KLHDC9Q8NEP7 349 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 OR4S1Q8NGB4 309 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 PELI1Q96FA3 418 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 LINC00597Q9H2U6 94 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 SFXN1Q9H9B4 322 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 TMEM9BQ9NQ34 198 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 SLCO1C1Q9NYB5 712 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 ZNF816-ZNF321PA0A0X1KG74 233 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 ZNF814B7Z6K7 855 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 ZNF321PQ8N8H1 164 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 TOE1Q96GM8 510 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 GHITMQ9H3K2 345 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 OR5H15A6NDH6 313 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 OR5H1A6NKK0 313 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 RRP8O43159 456 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 HPXP02790 462 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 GCH1P30793 250 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 APOBEC1P41238 236 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 THEM4Q5T1C6 240 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 METRNLQ641Q3 311 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 DMKNQ6E0U4 476 aaPredicted RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 SLC35G3Q8N808 338 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 SLC26A10Q8NG04 563 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 OGG1O15527 345 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 HSBP1O75506 76 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 IGHA1P01876 353 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 EIF1P41567 113 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 CDCA3Q99618 268 aaPredicted RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 LAT2Q9GZY6 243 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 MRPS18AQ9NVS2 196 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 NAT8Q9UHE5 227 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 CRHP06850 196 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 UBE2G1P62253 170 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 RPL18Q07020 188 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 ZNF154Q13106 437 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 OR10A7Q8NGE5 316 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 PBOV1Q9GZY1 135 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 KCNE1BA0A087WTH5 132 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 DUXBA0A1W2PPF3 345 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 IGLV3-27P01718 113 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 CD96P40200 585 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 ELAVL1Q15717 326 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 CMTM2Q8TAZ6 248 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 FBXL17Q9UF56 701 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 DAPP1Q9UN19 280 aa8.06□□□□□ -1.12
VCL-206ENST00000623461 PCDHGA9Q9Y5G4 932 aaKnown RBP8.06□□□□□ -1.12
VCL-206ENST00000623461 ARG1P05089 322 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 INSL4Q14641 139 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 AGERQ15109 404 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 LANCL3Q6ZV70 420 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 C19orf47Q8N9M1 422 aaKnown RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 CCDC74AQ96AQ1 378 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 OR8B4Q96RC9 309 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 HDAC8Q9BY41 377 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 MCTS1Q9ULC4 181 aaKnown RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 SLC22A13Q9Y226 551 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 GOLT1BQ9Y3E0 138 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 PRAMEF26H0Y7S4 382 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 PCBP3P57721 371 aaKnown RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 UBE2V2Q15819 145 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 TRMT12Q53H54 448 aaKnown RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 USP53Q70EK8 1073 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 EXTL1Q92935 676 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 ALX4Q9H161 411 aaPredicted RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 PCED1AQ9H1Q7 454 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 TXNIPQ9H3M7 391 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 SIGLEC7Q9Y286 467 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 XRCC2O43543 280 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 OR10J4P0C629 311 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 RAE1P78406 368 aaKnown RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 COX19Q49B96 90 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 LINC01465Q8N7H1 131 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 FKBP11Q9NYL4 201 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 RPH3ALQ9UNE2 315 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 LNP1A1A4G5 178 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 FCMRO60667 390 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 SEMA4FO95754 770 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 ACAA1P09110 424 aaPredicted RBP8.05□□□□□ -1.12
VCL-206ENST00000623461 ACKR1Q16570 336 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 NHLRC2Q8NBF2 726 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 CHST11Q9NPF2 352 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 ACAD8Q9UKU7 415 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 TNFSF18Q9UNG2 199 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 FER1L6Q2WGJ9 1857 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 MPPED1O15442 326 aa8.05□□□□□ -1.12
VCL-206ENST00000623461 CXCL2P19875 107 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms