RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 PSKH1P11801 424 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 PVALBP20472 110 aaPredicted RBP8□□□□□ -1.13
HDAC9-229ENST00000622668 EPHA1P21709 976 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 PAX7P23759 505 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 AGTR1P30556 359 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 NSUN5P2Q63ZY6 315 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 C10orf111Q8N326 155 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 ST6GALNAC3Q8NDV1 305 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 OR4D11Q8NGI4 311 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 OR4Q3Q8NH05 313 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 ZPLD1Q8TCW7 415 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 FCRL1Q96LA6 429 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 PHB2Q99623 299 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 OCSTAMPQ9BR26 566 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 HRASLSQ9HDD0 168 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 TRGV10A0A0A0MS01 117 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 FAM221AA4D161 298 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 CYB5BO43169 146 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 SFTPBP07988 381 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 CDKN1AP38936 164 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 NCS1P62166 190 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 MRPS34P82930 218 aaKnown RBP8□□□□□ -1.13
HDAC9-229ENST00000622668 PRDX4Q13162 271 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 GRK1Q15835 563 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 Q6ZT83 130 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 DOLPP1Q86YN1 238 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 SPICQ8N5J4 248 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 RBMXL3Q8N7X1 1067 aaKnown RBP8□□□□□ -1.13
HDAC9-229ENST00000622668 OR51D1Q8NGF3 324 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 OR6Q1Q8NGQ2 317 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 UBALD1Q8TB05 177 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 SECTM1Q8WVN6 248 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 C7orf34Q96L11 122 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 OR2H1Q9GZK4 316 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 OR51E2Q9H255 320 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 CLEC2DQ9UHP7 191 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 DOCK10Q96BY6 2186 aa8□□□□□ -1.13
HDAC9-229ENST00000622668 ANKRD34BA5PLL1 514 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 EPHA2P29317 976 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 SP5Q6BEB4 398 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 RAB12Q6IQ22 244 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 TPRA1Q86W33 373 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 OR1M1Q8NGA1 313 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 C22orf15Q8WYQ4 148 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 WDYHV1Q96HA8 205 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 DOK1Q99704 481 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 PIMREGQ9BSJ6 248 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 SEMA5BQ9P283 1151 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF629Q9UEG4 869 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 KIF25Q9UIL4 384 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ANAPC1Q9H1A4 1944 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 SPRY1O43609 319 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ZIC3O60481 467 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ATG12O94817 140 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 BGLAPP02818 100 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 RPA2P15927 270 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 WT1P19544 449 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 TGM1P22735 817 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 HLA-DMAP28067 261 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF136P52737 540 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 F2RL1P55085 397 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ACTBP60709 375 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 PSMA6P60900 246 aaKnown RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ACTG1P63261 375 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 LTBQ06643 244 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 DBPQ10586 325 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 DBX2Q6ZNG2 339 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 MRPL41Q8IXM3 137 aaKnown RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 OR6F1Q8NGZ6 308 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 RFESDQ8TAC1 157 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 OR8B4Q96RC9 309 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 CHIAQ9BZP6 476 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ANKRD36A6QL64 1941 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 CDIPTO14735 213 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 BCAS1O75363 584 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 LSM11P83369 360 aaKnown RBP eCLIP7.99□□□□□ -1.13
HDAC9-229ENST00000622668 EGR3Q06889 387 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 FOXO1Q12778 655 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 TMEM179BQ7Z7N9 219 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 SHISA5Q8N114 240 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 BPIFB2Q8N4F0 458 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 DMBX1Q8NFW5 382 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 OR2G2Q8NGZ5 317 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 ANKRD60Q9BZ19 345 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 YAE1D1Q9NRH1 226 aa7.99□□□□□ -1.13
HDAC9-229ENST00000622668 FER1L5A0AVI2 2057 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 GABRPO00591 440 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 CST2P09228 141 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 ZNF708P17019 499 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 AKR1C4P17516 323 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 LIPAP38571 399 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 PDCD1Q15116 288 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 RGS21Q2M5E4 152 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 YIF1BQ5BJH7 314 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 LHFPL2Q6ZUX7 228 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 LRRC20Q8TCA0 184 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 SLAMF9Q96A28 289 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 HAVCR1Q96D42 359 aa7.98□□□□□ -1.13
HDAC9-229ENST00000622668 SLC30A2Q9BRI3 323 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms