RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 C9JQL5 133 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 ISG15P05161 165 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 AMY2BP19961 511 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 LPAR6P43657 344 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 MEOX2P50222 304 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 PRSS12P56730 875 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 OR1D5P58170 312 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 MST1LQ2TV78 715 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 ZNF528Q3MIS6 628 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 NAA40Q86UY6 237 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 MTIF3Q9H2K0 278 aaKnown RBP13.97□□□□□ -0.17
NPHP4-211ENST00000622020 ASH2LQ9UBL3 628 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 A0A0A6YYH2 397 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 A0A1W2PNR3 127 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 A6NJ64 397 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 SNAPINO95295 136 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 SCGB1D2O95969 90 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 CD79AP11912 226 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 SNRPEP62304 92 aaKnown RBP13.97□□□□□ -0.17
NPHP4-211ENST00000622020 SUPT4H1P63272 117 aaKnown RBP13.97□□□□□ -0.17
NPHP4-211ENST00000622020 TDGQ13569 410 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 PHF19Q5T6S3 580 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 KIAA0895LQ68EN5 471 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 RNF133Q8WVZ7 376 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 LIN37Q96GY3 246 aaPredicted RBP13.97□□□□□ -0.17
NPHP4-211ENST00000622020 GPR84Q9NQS5 396 aa13.97□□□□□ -0.17
NPHP4-211ENST00000622020 MEX3AA1L020 520 aaKnown RBP13.96□□□□□ -0.17
NPHP4-211ENST00000622020 FTCDNL1E5RQL4 147 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 SFTA3P0C7M3 94 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 HLA-GP17693 338 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 RAB6AP20340 208 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 BLKP51451 505 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 H1FNTQ75WM6 255 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-211ENST00000622020 C1QL2Q7Z5L3 287 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 SLC30A7Q8NEW0 376 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 OR1L3Q8NH93 324 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 NANPQ8TBE9 248 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 DAZLQ92904 295 aaKnown RBP13.96□□□□□ -0.17
NPHP4-211ENST00000622020 KCNK17Q96T54 332 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 VN1R1Q9GZP7 353 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 ZNF701Q9NV72 531 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-211ENST00000622020 EDARQ9UNE0 448 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 DBX1A6NMT0 343 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 DAOP14920 347 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 RFC3P40938 356 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 CSNK2A1P68400 391 aaPredicted RBP13.96□□□□□ -0.17
NPHP4-211ENST00000622020 FAM209BQ5JX69 171 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 FAM57BQ71RH2 274 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 CSNK2A3Q8NEV1 391 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 OR5H2Q8NGV7 314 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 TMEM59Q9BXS4 323 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 EHFQ9NZC4 300 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 FLVCR1Q9Y5Y0 555 aa13.96□□□□□ -0.17
NPHP4-211ENST00000622020 TRAV20A0A0B4J274 112 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 MBTPS2O43462 519 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 BPNT1O95861 308 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 FOLR1P15328 257 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 KLK2P20151 261 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 MMP16P51512 607 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 PJVKQ0ZLH3 352 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 FOXF1Q12946 379 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 DNM1P34Q6PK57 102 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 AKR1E2Q96JD6 320 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 NRIP2Q9BQI9 281 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 ZFP57Q9NU63 452 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 LPAR3Q9UBY5 353 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 GPR132Q9UNW8 380 aa13.96□□□□□ -0.18
NPHP4-211ENST00000622020 BLACEA4D250 179 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 F8VVB4 439 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 F8VWA3 439 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 SERPINA2P20848 420 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 SHHQ15465 462 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 SLC16A13Q7RTY0 426 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 OR51T1Q8NGJ9 327 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 GLYATL2Q8WU03 294 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 ISOC2Q96AB3 205 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 RTBDNQ9BSG5 229 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-211ENST00000622020 TAF9BQ9HBM6 251 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 IGKV3D-11A0A0A0MRZ8 115 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 CDC14BO60729 498 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 FBLP22087 321 aaKnown RBP13.95□□□□□ -0.18
NPHP4-211ENST00000622020 PPT1P50897 306 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 ZNF121P58317 390 aaPredicted RBP13.95□□□□□ -0.18
NPHP4-211ENST00000622020 POLR2GP62487 172 aaKnown RBP eCLIP13.95□□□□□ -0.18
NPHP4-211ENST00000622020 PEA15Q15121 130 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 SWI5Q1ZZU3 235 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 OR1N1Q8NGS0 311 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 OR13G1Q8NGZ3 307 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 BIN3Q9NQY0 253 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 MMP26Q9NRE1 261 aa13.95□□□□□ -0.18
NPHP4-211ENST00000622020 TLCD2A6NGC4 264 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 SFT2D2O95562 160 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 HIST1H1DP16402 221 aaKnown RBP13.94□□□□□ -0.18
NPHP4-211ENST00000622020 DRD1P21728 446 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 SFTPDP35247 375 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 SNU13P55769 128 aaKnown RBP13.94□□□□□ -0.18
NPHP4-211ENST00000622020 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-211ENST00000622020 AVPI1Q5T686 147 aa13.94□□□□□ -0.18
NPHP4-211ENST00000622020 DHRS7BQ6IAN0 325 aaPredicted RBP13.94□□□□□ -0.18
NPHP4-211ENST00000622020 RBMS3Q6XE24 437 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms