RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 CDH26Q8IXH8 852 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 MBD3L2Q8NHZ7 208 aaPredicted RBP18.64■□□□□ 0.57
SPAST-204ENST00000621856 GPER1Q99527 375 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 CHST5Q9GZS9 411 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 MYEF2Q9P2K5 600 aaKnown RBP18.64■□□□□ 0.57
SPAST-204ENST00000621856 SVILO95425 2214 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 CEP295Q9C0D2 2601 aa18.64■□□□□ 0.57
SPAST-204ENST00000621856 IGKV1-9A0A0C4DH69 117 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 FIGNL2A6NMB9 653 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 RAD51DO75771 328 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 LYZL6O75951 148 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 CNOT4O95628 575 aaKnown RBP18.63■□□□□ 0.57
SPAST-204ENST00000621856 EDN3P14138 238 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 APLNRP35414 380 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 PTH2RP49190 550 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 UBE2NP61088 152 aaKnown RBP18.63■□□□□ 0.57
SPAST-204ENST00000621856 AWAT2Q6E213 333 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 MDP1Q86V88 176 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 NPRL2Q8WTW4 380 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 C15orf40Q8WUR7 153 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 SMIM4Q8WVI0 70 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 YIPF5Q969M3 257 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 XRCC3O43542 346 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 BPNT1O95861 308 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 ACKR3P25106 362 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 PTGER4P35408 488 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 MNDAP41218 407 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 RANBP1P43487 201 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 ZNF92Q03936 586 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 CISD2Q8N5K1 135 aaKnown RBP18.63■□□□□ 0.57
SPAST-204ENST00000621856 ENKURQ8TC29 256 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 NEDD4LQ96PU5 975 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 AUNIPQ9H7T9 357 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 PROCRQ9UNN8 238 aa18.63■□□□□ 0.57
SPAST-204ENST00000621856 MRPS28Q9Y2Q9 187 aaKnown RBP18.63■□□□□ 0.57
SPAST-204ENST00000621856 ANKRD11Q6UB99 2663 aaPredicted RBP18.62■□□□□ 0.57
SPAST-204ENST00000621856 hCG_38984A0A1B0GV85 526 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 LYRM1O43325 122 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 FAM87AP0C7U9 286 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 PRF1P14222 555 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 GSK3AP49840 483 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 BCAP31P51572 246 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 PRSS12P56730 875 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 UBE2V2Q15819 145 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 OR10K2Q6IF99 312 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 MTFR2Q6P444 385 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 COLCA1Q6ZS62 124 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 SEM1Q6ZVN7 128 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 KRT74Q7RTS7 529 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 ANGPTL5Q86XS5 388 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 GCDHQ92947 438 aaPredicted RBP18.62■□□□□ 0.57
SPAST-204ENST00000621856 POM121L2Q96KW2 1035 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 GAL3ST1Q99999 423 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 GPR173Q9NS66 373 aa18.62■□□□□ 0.57
SPAST-204ENST00000621856 FUOMA2VDF0 154 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 GGT3PA6NGU5 568 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 GABARAPH6UMI1 98 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 LDLRAD4O15165 306 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 TPPPO94811 219 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 KDM4BO94953 1096 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 RAB6AP20340 208 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 HOXD11P31277 338 aaPredicted RBP18.61■□□□□ 0.57
SPAST-204ENST00000621856 MRPS10P82664 201 aaKnown RBP18.61■□□□□ 0.57
SPAST-204ENST00000621856 FAM3AP98173 230 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 DMRTC1Q5HYR2 192 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 ZNF324BQ6AW86 544 aaPredicted RBP18.61■□□□□ 0.57
SPAST-204ENST00000621856 RTL6Q6ICC9 239 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 RNF144BQ7Z419 303 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 ZNF584Q8IVC4 421 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 CCDC36Q8IYA8 594 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 PNLDC1Q8NA58 520 aaKnown RBP18.61■□□□□ 0.57
SPAST-204ENST00000621856 Q8NA96 180 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 FAM57AQ8TBR7 257 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 FCAMRQ8WWV6 532 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 PLSCR4Q9NRQ2 329 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 RAB22AQ9UL26 194 aa18.61■□□□□ 0.57
SPAST-204ENST00000621856 ALX3O95076 343 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 OR3A4PP47883 348 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 PMPCAQ10713 525 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 BIVMQ86UB2 503 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 ZNF101Q8IZC7 436 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 TOMM5Q8N4H5 51 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 OR52I2Q8NH67 350 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 PIGTQ969N2 578 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 PTX4Q96A99 478 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 APOBEC3DQ96AK3 386 aaPredicted RBP18.6■□□□□ 0.57
SPAST-204ENST00000621856 MS4A3Q96HJ5 214 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 FAM215AQ9Y5M1 114 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 TRAV18A0A075B6X5 111 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 TNFSF13O75888 250 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 SRP9P49458 86 aaKnown RBP18.6■□□□□ 0.57
SPAST-204ENST00000621856 MALLQ13021 153 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 GABRA6Q16445 453 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 GLIPR1L1Q6UWM5 242 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 SPSB4Q96A44 273 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 RBFOX1Q9NWB1 397 aaKnown RBP18.6■□□□□ 0.57
SPAST-204ENST00000621856 MGAQ8IWI9 3026 aa18.6■□□□□ 0.57
SPAST-204ENST00000621856 CACNA1GO43497 2377 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 A0A1W2PR80 420 aa18.59■□□□□ 0.57
SPAST-204ENST00000621856 IL2RAP01589 272 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms