RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 TAAR3PQ9P1P4 343 aa8.81□□□□□ -1
CLTCL1-211ENST00000621271 FITM1A5D6W6 292 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 TXNL1O43396 289 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 GPM6AP51674 278 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 BHLHA15Q7RTS1 189 aaPredicted RBP8.8□□□□□ -1
CLTCL1-211ENST00000621271 SP7Q8TDD2 431 aaPredicted RBP8.8□□□□□ -1
CLTCL1-211ENST00000621271 DVL3Q92997 716 aaPredicted RBP8.8□□□□□ -1
CLTCL1-211ENST00000621271 SIGLEC11Q96RL6 698 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 RNF150Q9ULK6 438 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 ST3GAL6Q9Y274 331 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 MN1Q10571 1320 aaPredicted RBP8.8□□□□□ -1
CLTCL1-211ENST00000621271 TMEM129A0AVI4 362 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 ACTL6AO96019 429 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 CDAP32320 146 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 TGFBR1P36897 503 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 STUMQ69YW2 141 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 FJX1Q86VR8 437 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 C15orf54Q8N8G6 183 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 OR4C3Q8NH37 302 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 TM4SF19Q96DZ7 209 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 OR5V1Q9UGF6 321 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 CACFD1Q9UGQ2 172 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 ETHE1O95571 254 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 OR2T2Q6IF00 324 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 NUFIP2Q7Z417 695 aaKnown RBP8.8□□□□□ -1
CLTCL1-211ENST00000621271 ZNF441Q8N8Z8 693 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 OR2T6Q8NHC8 308 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 NDUFB11Q9NX14 153 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 LAMP3Q9UQV4 416 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 COL11A2P13942 1736 aaPredicted RBP8.8□□□□□ -1
CLTCL1-211ENST00000621271 LAMB1P07942 1786 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 TMEM30CPA0ZSE6 113 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 ZFP92A6NM28 416 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 TGM1P22735 817 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 COX7A1P24310 79 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 PPP1CAP62136 330 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 FLI1Q01543 452 aaPredicted RBP8.8□□□□□ -1
CLTCL1-211ENST00000621271 PAQR6Q6TCH4 344 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 SLC51BQ86UW2 128 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 FAM213BQ8TBF2 198 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 SEC22AQ96IW7 307 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 SPACA5Q96QH8 159 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 SPNS1Q9H2V7 528 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 PRDM7Q9NQW5 492 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 SLC25A37Q9NYZ2 338 aa8.8□□□□□ -1
CLTCL1-211ENST00000621271 AMMECR1Q9Y4X0 333 aaPredicted RBP8.8□□□□□ -1
CLTCL1-211ENST00000621271 IGHV5-10-1A0A0J9YXX1 117 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 BPIFB3P59826 476 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 ZNF117Q03924 483 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 PLA1AQ53H76 456 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 DCAF10Q5QP82 559 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 PXDC1Q5TGL8 231 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 PRSS42Q7Z5A4 293 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 SCARB1Q8WTV0 552 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 DOK1Q99704 481 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 DHRS9Q9BPW9 319 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 SAMD10Q9BYL1 202 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 C20orf85Q9H1P6 137 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 HRH4Q9H3N8 390 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 HINT3Q9NQE9 182 aaKnown RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 FBXO34Q9NWN3 711 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 A4GNTQ9UNA3 340 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 FAM221AA4D161 298 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 POU3F3P20264 500 aaPredicted RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 RPS27P42677 84 aaKnown RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 NKX2-1P43699 371 aaPredicted RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 CCR6P51684 374 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 PRRX1P54821 245 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 TAS2R45P59539 299 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 UBE2IP63279 158 aaKnown RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 DOC2BQ14184 412 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 SPNS3Q6ZMD2 512 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 ZFP82Q8N141 532 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 PXT1Q8NFP0 134 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 NUDT8Q8WV74 236 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 PELI1Q96FA3 418 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 ZNF75AQ96N20 296 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 TAAR6Q96RI8 345 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 SLC25A21Q9BQT8 299 aaPredicted RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 GAL3ST2Q9H3Q3 398 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 FBXL2Q9UKC9 423 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 B9D1Q9UPM9 204 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 RNF24Q9Y225 148 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 TRABD2BA6NFA1 517 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 KLK8O60259 260 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 DTYMKP23919 212 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 BRS3P32247 399 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 GZMKP49863 264 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 HCCSP53701 268 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 SSTP61278 116 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 SLC17A1Q14916 467 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 OSR2Q8N2R0 312 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 OR8B3Q8NGG8 313 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 OR8B2Q96RD0 313 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 ZNF2Q9BSG1 426 aaPredicted RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 ZNF768Q9H5H4 540 aaKnown RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 ASB1Q9Y576 335 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 SCN9AQ15858 1988 aa8.79□□□□□ -1
CLTCL1-211ENST00000621271 ZC3H12DA2A288 527 aaKnown RBP8.79□□□□□ -1
CLTCL1-211ENST00000621271 FADS1O60427 444 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms